| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|4090943|gb|AAC98912.1| |
score: 187 |
e-value: 7e-46 |
Identity: 97.83% |
Span: 276bp (43.7%) |
Frame: 3 |
| COP1 homolog [Solanum lycopersicum] |
| Match: gi|224131692|ref|XP_002321154.1| |
score: 174 |
e-value: 4e-42 |
Identity: 88.04% |
Span: 276bp (43.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa] |
| Match: gi|11127996|gb|AAG31173.1| |
score: 174 |
e-value: 4e-42 |
Identity: 89.13% |
Span: 276bp (43.7%) |
Frame: 3 |
| COP1 [Ipomoea nil] |
| Match: gi|255587080|ref|XP_002534127.1| |
score: 172 |
e-value: 2e-41 |
Identity: 85.87% |
Span: 276bp (43.7%) |
Frame: 3 |
| ubiquitin ligase protein cop1, putative [Ricinus communis] >gi223525812|gb|EEF28255.1| ubiquitin ligase protein cop1,... |
| Match: gi|15029364|gb|AAK81856.1|AF394913_1 |
score: 167 |
e-value: 9e-40 |
Identity: 81.52% |
Span: 276bp (43.7%) |
Frame: 3 |
| photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar] |
| Match: gi|225447155|ref|XP_002271415.1| |
score: 165 |
e-value: 3e-39 |
Identity: 80.43% |
Span: 276bp (43.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270241649|emb|CBI28869.1| unnamed protein product [Vitis vinifera] |
| Match: gi|147825286|emb|CAN71084.1| |
score: 165 |
e-value: 3e-39 |
Identity: 80.43% |
Span: 276bp (43.7%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|402685|gb|AAA32772.1| |
score: 162 |
e-value: 2e-38 |
Identity: 81.52% |
Span: 276bp (43.7%) |
Frame: 3 |
| regulatory protein [Arabidopsis thaliana] |
| Match: gi|15225760|ref|NP_180854.1| |
score: 162 |
e-value: 2e-38 |
Identity: 81.52% |
Span: 276bp (43.7%) |
Frame: 3 |
| COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi20141387... |
| Match: gi|270259000|emb|CBI41056.1| |
score: 161 |
e-value: 4e-38 |
Identity: 79.35% |
Span: 276bp (43.7%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225469127|ref|XP_002270330.1| |
score: 161 |
e-value: 4e-38 |
Identity: 79.35% |
Span: 276bp (43.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Match: gi|242066674|ref|XP_002454626.1| |
score: 157 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor] >gi241934457|gb|EES07602.1| hypothetical protein SORBIDRA... |
| Match: gi|218191653|gb|EEC74080.1| |
score: 156 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| hypothetical protein OsI_09100 [Oryza sativa Indica Group] |
| Match: gi|125583833|gb|EAZ24764.1| |
score: 156 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| hypothetical protein OsJ_08537 [Oryza sativa Japonica Group] |
| Match: gi|13925701|gb|AAK49415.1|AF261992_1 |
score: 156 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| COP1 [Oryza sativa Indica Group] |
| Match: gi|46805328|dbj|BAD16847.1| |
score: 156 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| putative COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica Group] |
| Match: gi|7592844|dbj|BAA94422.1| |
score: 156 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| COP1 [Oryza sativa Japonica Group] |
| Match: gi|115448949|ref|NP_001048254.1| |
score: 156 |
e-value: 1e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| Os02g0771100 [Oryza sativa (japonica cultivar-group)] >gi16151847|gb|AAL14875.1| copI [Oryza sativa] >gi|46805327|dbj... |
| Match: gi|224032003|gb|ACN35077.1| |
score: 155 |
e-value: 4e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|226501498|ref|NP_001145835.1| |
score: 155 |
e-value: 4e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| hypothetical protein LOC100279342 [Zea mays] >gi219884613|gb|ACL52681.1| unknown [Zea mays] |
| Match: gi|226503711|ref|NP_001152482.1| |
score: 155 |
e-value: 4e-36 |
Identity: 81.32% |
Span: 273bp (43.2%) |
Frame: 3 |
| ubiquitin ligase protein COP1 [Zea mays] >gi195656705|gb|ACG47820.1| ubiquitin ligase protein COP1 [Zea mays] |
| Match: gi|224118164|ref|XP_002331573.1| |
score: 154 |
e-value: 5e-36 |
Identity: 79.12% |
Span: 273bp (43.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa] |
| Match: gi|7688063|emb|CAB89693.1| |
score: 154 |
e-value: 5e-36 |
Identity: 75% |
Span: 276bp (43.7%) |
Frame: 3 |
| constitutively photomorphogenic 1 protein [Pisum sativum] |
| Match: gi|8574407|emb|CAB94800.1| |
score: 154 |
e-value: 6e-36 |
Identity: 75% |
Span: 276bp (43.7%) |
Frame: 3 |
| COP1 regulatory protein [Pisum sativum] |
| Match: gi|3121867|sp|P93471.1|COP1_PEA |
score: 154 |
e-value: 6e-36 |
Identity: 75% |
Span: 276bp (43.7%) |
Frame: 3 |
| RecName: Full=E3 ubiquitin-protein ligase COP1; AltName: Full=Constitutive photomorphogenesis protein 1 >gi1694900|em... |
|
| 97 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At2G32950.1 |
score: 162 |
e-value: 1e-40 |
Identity: 81.52% |
Span: 276bp (43.7%) |
Frame: 3 |
| Symbols: ATCOP1, DET340, FUS1, EMB168, COP1 | COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) | chr2:13985077-13990359 FORWARD |
| Match: At1G53090.2 |
score: 95.5 |
e-value: 2e-20 |
Identity: 54.12% |
Span: 252bp (39.9%) |
Frame: 3 |
| Symbols: SPA4 | SPA4 (SPA1-RELATED 4); signal transducer | chr1:19787416-19790358 FORWARD |
| Match: At1G53090.1 |
score: 95.5 |
e-value: 2e-20 |
Identity: 54.12% |
Span: 252bp (39.9%) |
Frame: 3 |
| Symbols: SPA4 | SPA4 (SPA1-RELATED 4); signal transducer | chr1:19787416-19790358 FORWARD |
| Match: At4G11110.1 |
score: 94 |
e-value: 7e-20 |
Identity: 47.25% |
Span: 267bp (42.2%) |
Frame: 3 |
| Symbols: SPA2 | SPA2 (SPA1-RELATED 2); signal transducer | chr4:6772159-6776671 FORWARD |
| Match: At3G15354.1 |
score: 92 |
e-value: 2e-19 |
Identity: 51.76% |
Span: 252bp (39.9%) |
Frame: 3 |
| Symbols: SPA3 | SPA3 (SPA1-RELATED 3); signal transducer | chr3:5169334-5172487 REVERSE |
| Match: At2G46340.1 |
score: 92 |
e-value: 2e-19 |
Identity: 47.25% |
Span: 267bp (42.2%) |
Frame: 3 |
| Symbols: SPA1 | SPA1 (SUPPRESSOR OF PHYA-105 1); signal transducer | chr2:19029645-19033894 REVERSE |
| Match: At5G23730.1 |
score: 65.5 |
e-value: 3e-11 |
Identity: 40.43% |
Span: 267bp (42.2%) |
Frame: 3 |
| nucleotide binding | chr5:8005289-8006395 FORWARD |
|
| swissprot [blastx] | Showing best 8 hits recorded |
| Match: P43254 |
score: 162 |
e-value: 1e-39 |
Identity: 81.52% |
Span: 276bp (43.7%) |
Frame: 3 |
| E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 |
| Match: P93471 |
score: 154 |
e-value: 4e-37 |
Identity: 75% |
Span: 276bp (43.7%) |
Frame: 3 |
| E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 |
| Match: Q94BM7 |
score: 95.5 |
e-value: 2e-19 |
Identity: 54.12% |
Span: 252bp (39.9%) |
Frame: 3 |
| Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 |
| Match: Q9T014 |
score: 94 |
e-value: 7e-19 |
Identity: 47.25% |
Span: 267bp (42.2%) |
Frame: 3 |
| Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 |
| Match: Q9LJR3 |
score: 92 |
e-value: 3e-18 |
Identity: 51.76% |
Span: 252bp (39.9%) |
Frame: 3 |
| Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 |
| Match: Q9SYX2 |
score: 92 |
e-value: 3e-18 |
Identity: 47.25% |
Span: 267bp (42.2%) |
Frame: 3 |
| Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 |
| Match: Q9R1A8 |
score: 86.3 |
e-value: 1e-16 |
Identity: 43.3% |
Span: 270bp (42.7%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 |
| Match: Q8NHY2 |
score: 86.3 |
e-value: 1e-16 |
Identity: 43.3% |
Span: 270bp (42.7%) |
Frame: 3 |
| E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 |
|
