genbank/nr [blastx] | Showing best 25 hits recorded |
Match: gi|78191414|gb|ABB29928.1| |
score: 139 |
e-value: 2e-31 |
Identity: 98.48% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Solanum tuberosum] |
Match: gi|76573357|gb|ABA46783.1| |
score: 135 |
e-value: 3e-30 |
Identity: 95.45% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Solanum tuberosum] |
Match: gi|78191408|gb|ABB29925.1| |
score: 135 |
e-value: 3e-30 |
Identity: 95.45% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Solanum tuberosum] |
Match: gi|247421866|gb|ACS96446.1| |
score: 134 |
e-value: 4e-30 |
Identity: 93.94% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18a [Jatropha curcas] |
Match: gi|225462960|ref|XP_002268750.1| |
score: 132 |
e-value: 2e-29 |
Identity: 92.42% |
Span: 198bp (33.6%) |
Frame: 2 |
PREDICTED: similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome [Vitis vinifera] >gi... |
Match: gi|225463466|ref|XP_002276260.1| |
score: 132 |
e-value: 2e-29 |
Identity: 92.42% |
Span: 198bp (33.6%) |
Frame: 2 |
PREDICTED: hypothetical protein [Vitis vinifera] >gi147769189|emb|CAN71860.1| hypothetical protein [Vitis vinifera] >... |
Match: gi|270243918|emb|CBI30857.1| |
score: 132 |
e-value: 2e-29 |
Identity: 92.42% |
Span: 198bp (33.6%) |
Frame: 2 |
unnamed protein product [Vitis vinifera] |
Match: gi|225463470|ref|XP_002276512.1| |
score: 132 |
e-value: 2e-29 |
Identity: 92.42% |
Span: 198bp (33.6%) |
Frame: 2 |
PREDICTED: similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome isoform 1 [Vitis vin... |
Match: gi|21362874|sp|Q9ATF5.1|RL18A_CASSA |
score: 132 |
e-value: 2e-29 |
Identity: 92.42% |
Span: 198bp (33.6%) |
Frame: 2 |
RecName: Full=60S ribosomal protein L18a >gi13430184|gb|AAK25759.1|AF334839_1 ribosomal protein L18a [Castanea sativa] |
Match: gi|118482586|gb|ABK93213.1| |
score: 131 |
e-value: 4e-29 |
Identity: 90.91% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Populus trichocarpa] >gi118485561|gb|ABK94632.1| unknown [Populus trichocarpa] |
Match: gi|224116756|ref|XP_002317384.1| |
score: 130 |
e-value: 8e-29 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
predicted protein [Populus trichocarpa] >gi118483631|gb|ABK93710.1| unknown [Populus trichocarpa] >gi|222860449|gb|EE... |
Match: gi|255628313|gb|ACU14501.1| |
score: 130 |
e-value: 1e-28 |
Identity: 90.91% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Glycine max] |
Match: gi|255575183|ref|XP_002528496.1| |
score: 130 |
e-value: 1e-28 |
Identity: 87.88% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18a, putative [Ricinus communis] >gi223532105|gb|EEF33913.1| 60S ribosomal protein L18a, putat... |
Match: gi|115465471|ref|NP_001056335.1| |
score: 130 |
e-value: 1e-28 |
Identity: 90.91% |
Span: 198bp (33.6%) |
Frame: 2 |
Os05g0565000 [Oryza sativa (japonica cultivar-group)] >gi50511482|gb|AAT77404.1| putative 60S ribosomal protein L18a ... |
Match: gi|255629253|gb|ACU14971.1| |
score: 129 |
e-value: 2e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Glycine max] |
Match: gi|255627767|gb|ACU14228.1| |
score: 129 |
e-value: 2e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Glycine max] |
Match: gi|224078998|ref|XP_002305712.1| |
score: 129 |
e-value: 2e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
predicted protein [Populus trichocarpa] >gi224079000|ref|XP_002305713.1| predicted protein [Populus trichocarpa] >gi|... |
Match: gi|118484993|gb|ABK94361.1| |
score: 129 |
e-value: 2e-28 |
Identity: 87.88% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Populus trichocarpa] |
Match: gi|224062663|ref|XP_002300869.1| |
score: 129 |
e-value: 2e-28 |
Identity: 87.88% |
Span: 198bp (33.6%) |
Frame: 2 |
predicted protein [Populus trichocarpa] >gi118481342|gb|ABK92614.1| unknown [Populus trichocarpa] >gi|222842595|gb|EE... |
Match: gi|218188807|gb|EEC71234.1| |
score: 128 |
e-value: 3e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
hypothetical protein OsI_03189 [Oryza sativa Indica Group] >gi255673532|dbj|BAF05719.2| Os01g0666900 [Oryza sativa Ja... |
Match: gi|217072984|gb|ACJ84852.1| |
score: 128 |
e-value: 3e-28 |
Identity: 90.91% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Medicago truncatula] |
Match: gi|255631354|gb|ACU16044.1| |
score: 128 |
e-value: 4e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Glycine max] |
Match: gi|242088849|ref|XP_002440257.1| |
score: 128 |
e-value: 4e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
hypothetical protein SORBIDRAFT_09g028590 [Sorghum bicolor] >gi241945542|gb|EES18687.1| hypothetical protein SORBIDRA... |
Match: gi|223948743|gb|ACN28455.1| |
score: 128 |
e-value: 4e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
unknown [Zea mays] |
Match: gi|195656289|gb|ACG47612.1| |
score: 128 |
e-value: 4e-28 |
Identity: 89.39% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18a [Zea mays] |
|
132 lower scoring hits censored -- only 25 best hits are stored. |
arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
Match: At2G34480.1 |
score: 122 |
e-value: 2e-28 |
Identity: 86.36% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18A (RPL18aB) | chr2:14539995-14541240 REVERSE |
Match: At3G14600.1 |
score: 122 |
e-value: 2e-28 |
Identity: 87.3% |
Span: 189bp (32.1%) |
Frame: 2 |
60S ribosomal protein L18A (RPL18aC) | chr3:4910780-4911940 FORWARD |
Match: At1G29970.2 |
score: 115 |
e-value: 1e-26 |
Identity: 75.34% |
Span: 219bp (37.2%) |
Frame: 2 |
Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome | chr1:10498442-105012... |
Match: At1G29965.1 |
score: 114 |
e-value: 4e-26 |
Identity: 80.3% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18A (RPL18aA) | chr1:10498442-10499357 REVERSE |
|
swissprot [blastx] | Showing best 16 hits recorded |
Match: Q9ATF5 |
score: 132 |
e-value: 2e-30 |
Identity: 92.42% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1 |
Match: Q943F3 |
score: 122 |
e-value: 1e-27 |
Identity: 84.85% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1 |
Match: P51418 |
score: 122 |
e-value: 2e-27 |
Identity: 86.36% |
Span: 198bp (33.6%) |
Frame: 2 |
60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2 |
Match: Q9LUD4 |
score: 122 |
e-value: 2e-27 |
Identity: 87.3% |
Span: 189bp (32.1%) |
Frame: 2 |
60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1 |
Match: P0C2I0 |
score: 82 |
e-value: 2e-15 |
Identity: 54.1% |
Span: 183bp (31.1%) |
Frame: 2 |
60S ribosomal protein L20 OS=Saccharomyces cerevisiae GN=RPL20A PE=1 SV=2 |
Match: Q54MK8 |
score: 80.1 |
e-value: 9e-15 |
Identity: 55% |
Span: 180bp (30.6%) |
Frame: 2 |
60S ribosomal protein L18a OS=Dictyostelium discoideum GN=rpl18a PE=3 SV=2 |
Match: P05732 |
score: 77.4 |
e-value: 6e-14 |
Identity: 54.24% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L20 OS=Schizosaccharomyces pombe GN=rpl20a PE=1 SV=3 |
Match: Q8WQI7 |
score: 74.3 |
e-value: 5e-13 |
Identity: 47.46% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L18a OS=Spodoptera frugiperda GN=RpL18A PE=2 SV=1 |
Match: P41093 |
score: 71.2 |
e-value: 4e-12 |
Identity: 49.15% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L18a OS=Drosophila melanogaster GN=RpL18A PE=1 SV=1 |
Match: O44480 |
score: 68.9 |
e-value: 2e-11 |
Identity: 48.33% |
Span: 180bp (30.6%) |
Frame: 2 |
60S ribosomal protein L18a OS=Caenorhabditis elegans GN=rpl-20 PE=2 SV=2 |
Match: P62718 |
score: 67.8 |
e-value: 5e-11 |
Identity: 49.15% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1 |
Match: P62717 |
score: 67.8 |
e-value: 5e-11 |
Identity: 49.15% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1 |
Match: Q02543 |
score: 67.8 |
e-value: 5e-11 |
Identity: 49.15% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2 |
Match: Q3T003 |
score: 67.8 |
e-value: 5e-11 |
Identity: 49.15% |
Span: 177bp (30.1%) |
Frame: 2 |
60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1 |
Match: Q90YU9 |
score: 67.4 |
e-value: 6e-11 |
Identity: 53.85% |
Span: 156bp (26.5%) |
Frame: 2 |
60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1 |
Match: O57561 |
score: 67 |
e-value: 8e-11 |
Identity: 53.85% |
Span: 156bp (26.5%) |
Frame: 2 |
60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1 |
|