| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|122003|sp|P25469.1|H2A1_SOLLC |
score: 122 |
e-value: 2e-26 |
Identity: 96.88% |
Span: 192bp (28.1%) |
Frame: 3 |
| RecName: Full=Histone H2A.1; AltName: Full=LeH2A-1 |
| Match: gi|27529852|dbj|BAC53941.1| |
score: 120 |
e-value: 2e-25 |
Identity: 93.75% |
Span: 192bp (28.1%) |
Frame: 3 |
| H2A histone [Nicotiana tabacum] |
| Match: gi|255647574|gb|ACU24250.1| |
score: 115 |
e-value: 4e-24 |
Identity: 90.62% |
Span: 192bp (28.1%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|242090781|ref|XP_002441223.1| |
score: 114 |
e-value: 1e-23 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_09g022690 [Sorghum bicolor] >gi241946508|gb|EES19653.1| hypothetical protein SORBIDRA... |
| Match: gi|195637852|gb|ACG38394.1| |
score: 114 |
e-value: 9e-24 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone H2A [Zea mays] |
| Match: gi|219362693|ref|NP_001136625.1| |
score: 114 |
e-value: 9e-24 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| hypothetical protein LOC100216750 [Zea mays] >gi194696418|gb|ACF82293.1| unknown [Zea mays] >gi|195626780|gb|ACG35220... |
| Match: gi|195622400|gb|ACG33030.1| |
score: 112 |
e-value: 3e-23 |
Identity: 88.71% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone H2A [Zea mays] |
| Match: gi|255640946|gb|ACU20753.1| |
score: 112 |
e-value: 3e-23 |
Identity: 89.06% |
Span: 192bp (28.1%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|62149085|dbj|BAD93602.1| |
score: 112 |
e-value: 3e-23 |
Identity: 93.22% |
Span: 177bp (25.9%) |
Frame: 3 |
| hypothetical protein [Cucumis melo] |
| Match: gi|47026912|gb|AAT08677.1| |
score: 112 |
e-value: 3e-23 |
Identity: 93.33% |
Span: 180bp (26.3%) |
Frame: 3 |
| histone H2A [Hyacinthus orientalis] |
| Match: gi|270247236|emb|CBI32611.1| |
score: 112 |
e-value: 3e-23 |
Identity: 94.92% |
Span: 177bp (25.9%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|218195973|gb|EEC78400.1| |
score: 112 |
e-value: 3e-23 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| hypothetical protein OsI_18189 [Oryza sativa Indica Group] >gi222629961|gb|EEE62093.1| hypothetical protein OsJ_16877... |
| Match: gi|225439749|ref|XP_002274570.1| |
score: 112 |
e-value: 3e-23 |
Identity: 94.92% |
Span: 177bp (25.9%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147769777|emb|CAN63391.1| hypothetical protein [Vitis vinifera] |
| Match: gi|115461717|ref|NP_001054458.1| |
score: 112 |
e-value: 3e-23 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| Os05g0113900 [Oryza sativa (japonica cultivar-group)] >gi108936004|sp|Q75L11.2|H2A6_ORYSJ RecName: Full=Probable hist... |
| Match: gi|45680447|gb|AAS75248.1| |
score: 112 |
e-value: 3e-23 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| putative histone H2A [Oryza sativa Japonica Group] |
| Match: gi|115436786|ref|NP_001043136.1| |
score: 112 |
e-value: 3e-23 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| Os01g0502700 [Oryza sativa (japonica cultivar-group)] >gi115452261|ref|NP_001049731.1| Os03g0279200 [Oryza sativa (ja... |
| Match: gi|47026919|gb|AAT08680.1| |
score: 112 |
e-value: 4e-23 |
Identity: 93.33% |
Span: 180bp (26.3%) |
Frame: 3 |
| histone H2A [Hyacinthus orientalis] |
| Match: gi|108936001|sp|Q2HU68.1|H2A1_MEDTR |
score: 112 |
e-value: 4e-23 |
Identity: 91.94% |
Span: 186bp (27.2%) |
Frame: 3 |
| RecName: Full=Probable histone H2A.1 >gi87240419|gb|ABD32277.1| Histone H2A; Histone-fold [Medicago truncatula] |
| Match: gi|255584772|ref|XP_002533104.1| |
score: 111 |
e-value: 6e-23 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone h2a, putative [Ricinus communis] >gi223527095|gb|EEF29276.1| histone h2a, putative [Ricinus communis] |
| Match: gi|224087383|ref|XP_002308145.1| |
score: 111 |
e-value: 6e-23 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone 2 [Populus trichocarpa] >gi222854121|gb|EEE91668.1| histone 2 [Populus trichocarpa] |
| Match: gi|255626369|gb|ACU13529.1| |
score: 111 |
e-value: 6e-23 |
Identity: 87.5% |
Span: 192bp (28.1%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|118485435|gb|ABK94574.1| |
score: 111 |
e-value: 6e-23 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| unknown [Populus trichocarpa] |
| Match: gi|255584768|ref|XP_002533102.1| |
score: 111 |
e-value: 6e-23 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone h2a, putative [Ricinus communis] >gi223527093|gb|EEF29274.1| histone h2a, putative [Ricinus communis] |
| Match: gi|224123096|ref|XP_002318994.1| |
score: 111 |
e-value: 6e-23 |
Identity: 85.94% |
Span: 192bp (28.1%) |
Frame: 3 |
| histone 2 [Populus trichocarpa] >gi222857370|gb|EEE94917.1| histone 2 [Populus trichocarpa] |
| Match: gi|122003|sp|P25469.1|H2A1_SOLLC |
score: 74.3 |
e-value: 1e-11 |
Identity: 100% |
Span: 108bp (15.8%) |
Frame: 1 |
| RecName: Full=Histone H2A.1; AltName: Full=LeH2A-1 |
|
| 241 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 17 hits recorded |
| Match: At5G59870.1 |
score: 109 |
e-value: 2e-24 |
Identity: 90% |
Span: 180bp (26.3%) |
Frame: 3 |
| histone H2A, putative | chr5:24132831-24133370 REVERSE |
| Match: At5G02560.1 |
score: 108 |
e-value: 2e-24 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone H2A, putative | chr5:575435-576454 FORWARD |
| Match: At5G27670.1 |
score: 105 |
e-value: 3e-23 |
Identity: 82.26% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone H2A, putative | chr5:9792810-9793368 REVERSE |
| Match: At3G20670.1 |
score: 96.7 |
e-value: 1e-20 |
Identity: 74.19% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone H2A, putative | chr3:7229478-7229969 FORWARD |
| Match: At1G51060.1 |
score: 96.3 |
e-value: 2e-20 |
Identity: 74.19% |
Span: 186bp (27.2%) |
Frame: 3 |
| histone H2A, putative | chr1:18930616-18931111 FORWARD |
| Match: At5G54640.1 |
score: 96.3 |
e-value: 2e-20 |
Identity: 74.19% |
Span: 186bp (27.2%) |
Frame: 3 |
| Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22213766-22214505 FORWARD |
| Match: At4G27230.1 |
score: 95.9 |
e-value: 2e-20 |
Identity: 77.97% |
Span: 177bp (25.9%) |
Frame: 3 |
| histone H2A, putative | chr4:13637521-13638331 REVERSE |
| Match: At1G08880.1 |
score: 94 |
e-value: 7e-20 |
Identity: 79.31% |
Span: 174bp (25.4%) |
Frame: 3 |
| histone H2A, putative | chr1:2847147-2847679 REVERSE |
| Match: At1G54690.1 |
score: 94 |
e-value: 7e-20 |
Identity: 79.31% |
Span: 174bp (25.4%) |
Frame: 3 |
| histone H2A, putative | chr1:20418274-20418873 REVERSE |
| Match: At5G27670.1 |
score: 65.1 |
e-value: 4e-11 |
Identity: 83.33% |
Span: 108bp (15.8%) |
Frame: 1 |
| histone H2A, putative | chr5:9792810-9793368 REVERSE |
| Match: At1G52740.1 |
score: 64.7 |
e-value: 5e-11 |
Identity: 57.63% |
Span: 177bp (25.9%) |
Frame: 3 |
| histone H2A, putative | chr1:19649077-19649889 FORWARD |
| Match: At3G54560.1 |
score: 64.7 |
e-value: 5e-11 |
Identity: 59.65% |
Span: 171bp (25.0%) |
Frame: 3 |
| histone H2A.F/Z | chr3:20207510-20208444 FORWARD |
| Match: At5G02560.1 |
score: 64.3 |
e-value: 6e-11 |
Identity: 77.14% |
Span: 105bp (15.4%) |
Frame: 1 |
| histone H2A, putative | chr5:575435-576454 FORWARD |
| Match: At2G38810.2 |
score: 64.3 |
e-value: 6e-11 |
Identity: 59.65% |
Span: 171bp (25.0%) |
Frame: 3 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.3 |
score: 64.3 |
e-value: 6e-11 |
Identity: 59.65% |
Span: 171bp (25.0%) |
Frame: 3 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.1 |
score: 64.3 |
e-value: 6e-11 |
Identity: 59.65% |
Span: 171bp (25.0%) |
Frame: 3 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At5G59870.1 |
score: 63.9 |
e-value: 8e-11 |
Identity: 80.56% |
Span: 108bp (15.8%) |
Frame: 1 |
| histone H2A, putative | chr5:24132831-24133370 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P25469 |
score: 122 |
e-value: 2e-27 |
Identity: 96.88% |
Span: 192bp (28.1%) |
Frame: 3 |
| Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1 |
| Match: Q94E96 |
score: 112 |
e-value: 2e-24 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1 |
| Match: Q75L11 |
score: 112 |
e-value: 2e-24 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2 |
| Match: Q2HU68 |
score: 112 |
e-value: 3e-24 |
Identity: 91.94% |
Span: 186bp (27.2%) |
Frame: 3 |
| Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1 |
| Match: A2XZN0 |
score: 112 |
e-value: 2e-24 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2 |
| Match: A2WQG7 |
score: 112 |
e-value: 2e-24 |
Identity: 91.67% |
Span: 180bp (26.3%) |
Frame: 3 |
| Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1 |
| Match: Q9M531 |
score: 111 |
e-value: 4e-24 |
Identity: 90.32% |
Span: 186bp (27.2%) |
Frame: 3 |
| Histone H2A OS=Euphorbia esula PE=2 SV=1 |
| Match: Q6L500 |
score: 111 |
e-value: 4e-24 |
Identity: 88.71% |
Span: 186bp (27.2%) |
Frame: 3 |
| Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1 |
| Match: A2Y5G8 |
score: 111 |
e-value: 4e-24 |
Identity: 88.71% |
Span: 186bp (27.2%) |
Frame: 3 |
| Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1 |
| Match: Q2HU65 |
score: 111 |
e-value: 5e-24 |
Identity: 93.22% |
Span: 177bp (25.9%) |
Frame: 3 |
| Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1 |
| Match: P40280 |
score: 110 |
e-value: 6e-24 |
Identity: 90% |
Span: 180bp (26.3%) |
Frame: 3 |
| Histone H2A OS=Zea mays PE=2 SV=1 |
| Match: P19177 |
score: 110 |
e-value: 1e-23 |
Identity: 90% |
Span: 180bp (26.3%) |
Frame: 3 |
| Histone H2A OS=Petroselinum crispum PE=2 SV=1 |
| Match: Q1S053 |
score: 110 |
e-value: 6e-24 |
Identity: 88.89% |
Span: 189bp (27.6%) |
Frame: 3 |
| Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1 |
| Match: Q9FJE8 |
score: 109 |
e-value: 2e-23 |
Identity: 90% |
Span: 180bp (26.3%) |
Frame: 3 |
| Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1 SV=1 |
| Match: P25469 |
score: 74.3 |
e-value: 7e-13 |
Identity: 100% |
Span: 108bp (15.8%) |
Frame: 1 |
| Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1 |
| Match: P19177 |
score: 71.2 |
e-value: 6e-12 |
Identity: 88.89% |
Span: 108bp (15.8%) |
Frame: 1 |
| Histone H2A OS=Petroselinum crispum PE=2 SV=1 |
| Match: Q1S053 |
score: 70.5 |
e-value: 9e-12 |
Identity: 88.89% |
Span: 108bp (15.8%) |
Frame: 1 |
| Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1 |
| Match: Q2HU65 |
score: 70.5 |
e-value: 9e-12 |
Identity: 88.89% |
Span: 108bp (15.8%) |
Frame: 1 |
| Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1 |
| Match: Q2HU68 |
score: 68.6 |
e-value: 4e-11 |
Identity: 86.11% |
Span: 108bp (15.8%) |
Frame: 1 |
| Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1 |
| Match: A2WQG7 |
score: 68.2 |
e-value: 5e-11 |
Identity: 80.56% |
Span: 108bp (15.8%) |
Frame: 1 |
| Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1 |
| Match: A2XZN0 |
score: 68.2 |
e-value: 5e-11 |
Identity: 85.71% |
Span: 105bp (15.4%) |
Frame: 1 |
| Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2 |
| Match: Q75L11 |
score: 68.2 |
e-value: 5e-11 |
Identity: 85.71% |
Span: 105bp (15.4%) |
Frame: 1 |
| Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2 |
| Match: Q94E96 |
score: 68.2 |
e-value: 5e-11 |
Identity: 80.56% |
Span: 108bp (15.8%) |
Frame: 1 |
| Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1 |
| Match: Q9M531 |
score: 67.8 |
e-value: 6e-11 |
Identity: 85.71% |
Span: 105bp (15.4%) |
Frame: 1 |
| Histone H2A OS=Euphorbia esula PE=2 SV=1 |
| Match: P40280 |
score: 67.4 |
e-value: 8e-11 |
Identity: 83.33% |
Span: 108bp (15.8%) |
Frame: 1 |
| Histone H2A OS=Zea mays PE=2 SV=1 |
|
| 172 lower scoring hits censored -- only 25 best hits are stored. |
