| arabidopsis/peptide [blastx] | Showing best 11 hits recorded |
| Match: At5G30510.1 |
score: 572 |
e-value: 2e-163 |
Identity: 78.85% |
Span: 1236bp (83.5%) |
Frame: 3 |
| Symbols: ARRPS1, RPS1 | RPS1 (ribosomal protein S1); RNA binding | chr5:11636492-11638453 REVERSE |
| Match: At1G71720.1 |
score: 80.9 |
e-value: 2e-15 |
Identity: 30.35% |
Span: 597bp (40.3%) |
Frame: 3 |
| S1 RNA-binding domain-containing protein | chr1:26987406-26989555 FORWARD |
| Match: At3G23700.1 |
score: 79.7 |
e-value: 4e-15 |
Identity: 35.81% |
Span: 390bp (26.4%) |
Frame: 3 |
| S1 RNA-binding domain-containing protein | chr3:8531696-8533749 REVERSE |
| Match: At5G14580.1 |
score: 68.2 |
e-value: 1e-11 |
Identity: 36.94% |
Span: 306bp (20.7%) |
Frame: 3 |
| polyribonucleotide nucleotidyltransferase, putative | chr5:4697615-4703016 REVERSE |
| Match: At3G11964.1 |
score: 63.2 |
e-value: 4e-10 |
Identity: 28.03% |
Span: 459bp (31.0%) |
Frame: 3 |
| S1 RNA-binding domain-containing protein | chr3:3793963-3806632 REVERSE |
| Match: At4G29060.1 |
score: 60.1 |
e-value: 3e-09 |
Identity: 36.84% |
Span: 225bp (15.2%) |
Frame: 3 |
| Symbols: EMB2726 | EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor | chr4:14317750-14321321 FORWARD |
| Match: At4G29060.2 |
score: 60.1 |
e-value: 3e-09 |
Identity: 36.84% |
Span: 225bp (15.2%) |
Frame: 3 |
| Symbols: EMB2726 | EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor | chr4:14317750-14321321 FORWARD |
| Match: At2G40290.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 23.78% |
Span: 447bp (30.2%) |
Frame: 3 |
| eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative | chr2:168... |
| Match: At2G40290.3 |
score: 53.9 |
e-value: 2e-07 |
Identity: 23.78% |
Span: 447bp (30.2%) |
Frame: 3 |
| RNA binding | chr2:16836950-16837967 REVERSE |
| Match: At2G40290.2 |
score: 53.9 |
e-value: 2e-07 |
Identity: 23.78% |
Span: 447bp (30.2%) |
Frame: 3 |
| eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative | chr2:168... |
| Match: At5G05470.1 |
score: 48.9 |
e-value: 8e-06 |
Identity: 22.56% |
Span: 447bp (30.2%) |
Frame: 3 |
| Symbols: ATEIF2-A2, EIF2-A2, EIF2 ALPHA | EIF2 ALPHA (eukaryotic translation initiation factor 2 alpha subunit); RNA... |
|
| 1 lower scoring hits censored -- only 11 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|18060|emb|CAA46927.1| |
score: 588 |
e-value: 2e-166 |
Identity: 82.48% |
Span: 1227bp (82.9%) |
Frame: 3 |
| gi|18060|emb|CAA46927.1| ribosomal protein S1 [Spinacia oleracea] >gi|322404|pir||A44121 ribosomal protein S1 precurs... |
| Match: gi|30692346|ref|NP_850903.1| |
score: 572 |
e-value: 1e-161 |
Identity: 78.85% |
Span: 1236bp (83.5%) |
Frame: 3 |
| RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome [Arabidopsis thaliana] >gi13877939|gb|A... |
| Match: gi|108707824|gb|ABF95619.1| |
score: 489 |
e-value: 1e-136 |
Identity: 70.5% |
Span: 1200bp (81.1%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1255... |
| Match: gi|108707823|gb|ABF95618.1| |
score: 436 |
e-value: 1e-120 |
Identity: 65.5% |
Span: 1200bp (81.1%) |
Frame: 3 |
| 30S ribosomal protein S1, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|110169091|gb|ABG53631.1| |
score: 270 |
e-value: 2e-70 |
Identity: 51.71% |
Span: 873bp (59.0%) |
Frame: 3 |
| RNA |
| Match: gi|22299589|ref|NP_682836.1| |
score: 270 |
e-value: 1e-70 |
Identity: 49.84% |
Span: 918bp (62.0%) |
Frame: 3 |
| gi|22299589|ref|NP_682836.1| 30S ribosomal protein S1 [Thermosynechococcus elongatus BP-1] gi|22295773|dbj|BAC09598.1... |
| Match: gi|23128852|ref|ZP_00110690.1| |
score: 268 |
e-value: 6e-70 |
Identity: 48.26% |
Span: 1011bp (68.3%) |
Frame: 3 |
| gi|23128852|ref|ZP_00110690.1| COG0539: Ribosomal protein S1 [Nostoc punctiforme] |
| Match: gi|78169727|gb|ABB26824.1| |
score: 268 |
e-value: 4e-70 |
Identity: 48.84% |
Span: 906bp (61.2%) |
Frame: 3 |
| RNA |
| Match: gi|33863935|ref|NP_895495.1| |
score: 267 |
e-value: 1e-69 |
Identity: 48.51% |
Span: 906bp (61.2%) |
Frame: 3 |
| 30S ribosomal protein S1 [Prochlorococcus marinus str. MIT 9313] >gi33635519|emb|CAE21843.1| 30S ribosomal protein S1... |
| Match: gi|86609793|ref|YP_478555.1| |
score: 267 |
e-value: 1e-69 |
Identity: 51.89% |
Span: 870bp (58.8%) |
Frame: 3 |
| ribosomal |
| Match: gi|86607005|ref|YP_475768.1| |
score: 266 |
e-value: 2e-69 |
Identity: 50.67% |
Span: 891bp (60.2%) |
Frame: 3 |
| ribosomal |
| Match: gi|87124899|ref|ZP_01080746.1| |
score: 265 |
e-value: 5e-69 |
Identity: 47.85% |
Span: 906bp (61.2%) |
Frame: 3 |
| RNA |
| Match: gi|78196477|gb|ABB34242.1| |
score: 265 |
e-value: 3e-69 |
Identity: 48.18% |
Span: 906bp (61.2%) |
Frame: 3 |
| RNA |
| Match: gi|17135114|dbj|BAB77660.1| |
score: 265 |
e-value: 4e-69 |
Identity: 46.33% |
Span: 1011bp (68.3%) |
Frame: 3 |
| gi|17135114|dbj|BAB77660.1| 30S ribosomal protein S1 [Nostoc sp. PCC 7120] >gi|25311779|pir||AH1823 30S ribosomal pro... |
| Match: gi|67923044|ref|ZP_00516537.1| |
score: 265 |
e-value: 3e-69 |
Identity: 48.74% |
Span: 942bp (63.6%) |
Frame: 3 |
| gi|67923044|ref|ZP_00516537.1| RNA binding S1 [Crocosphaera watsonii WH 8501] >gi|67855123|gb|EAM50389.1| RNA binding... |
| Match: gi|33866517|ref|NP_898076.1| |
score: 265 |
e-value: 3e-69 |
Identity: 48.51% |
Span: 906bp (61.2%) |
Frame: 3 |
| gi|33866517|ref|NP_898076.1| 30S ribosomal protein S1, homolog A [Synechococcus sp. WH 8102] gi|33633295|emb|CAE08500... |
| Match: gi|88807804|ref|ZP_01123315.1| |
score: 265 |
e-value: 4e-69 |
Identity: 48.51% |
Span: 906bp (61.2%) |
Frame: 3 |
| 30S |
| Match: gi|87300975|ref|ZP_01083817.1| |
score: 265 |
e-value: 5e-69 |
Identity: 48.18% |
Span: 906bp (61.2%) |
Frame: 3 |
| 30S ribosomal protein S1 [Synechococcus sp. WH 5701] >gi87284846|gb|EAQ76798.1| 30S ribosomal protein S1 [Synechococc... |
| Match: gi|56750845|ref|YP_171546.1| |
score: 264 |
e-value: 9e-69 |
Identity: 50.17% |
Span: 876bp (59.2%) |
Frame: 3 |
| gi|56750845|ref|YP_171546.1| 30S ribosomal protein S1 [Synechococcus elongatus PCC 6301] >gi|56685804|dbj|BAD79026.1|... |
| Match: gi|75907727|ref|YP_322023.1| |
score: 263 |
e-value: 1e-68 |
Identity: 46.04% |
Span: 1011bp (68.3%) |
Frame: 3 |
| gi|75907727|ref|YP_322023.1| RNA binding S1 [Anabaena variabilis ATCC 29413] >gi|75701452|gb|ABA21128.1| RNA binding ... |
| Match: gi|72383525|ref|YP_292880.1| |
score: 263 |
e-value: 2e-68 |
Identity: 48.51% |
Span: 906bp (61.2%) |
Frame: 3 |
| gi|72383525|ref|YP_292880.1| RNA binding S1 [Prochlorococcus marinus str. NATL2A] >gi|72003375|gb|AAZ59177.1| RNA bin... |
| Match: gi|84518606|ref|ZP_01005955.1| |
score: 260 |
e-value: 1e-67 |
Identity: 47.19% |
Span: 906bp (61.2%) |
Frame: 3 |
| 30S |
| Match: gi|78712202|gb|ABB49379.1| |
score: 259 |
e-value: 2e-67 |
Identity: 47.67% |
Span: 897bp (60.6%) |
Frame: 3 |
| gi|78712202|gb|ABB49379.1| RNA binding S1 [Prochlorococcus marinus str. MIT 9312] |
| Match: gi|666973|dbj|BAA05946.1| |
score: 258 |
e-value: 4e-67 |
Identity: 49.49% |
Span: 876bp (59.2%) |
Frame: 3 |
| gi|666973|dbj|BAA05946.1| ribosomal protein S1 [Synechococcus sp.] >gi|1075612|pir||S51485 ribosomal protein S1 - Syn... |
| Match: gi|33860870|ref|NP_892431.1| |
score: 257 |
e-value: 9e-67 |
Identity: 47.35% |
Span: 903bp (61.0%) |
Frame: 3 |
| gi|33860870|ref|NP_892431.1| 30S ribosomal protein S1, homolog A [Prochlorococcus marinus subsp. pastoris str. CCMP13... |
| Match: gi|33239803|ref|NP_874745.1| |
score: 256 |
e-value: 1e-66 |
Identity: 46.53% |
Span: 906bp (61.2%) |
Frame: 3 |
| gi|33239803|ref|NP_874745.1| Ribosomal protein S1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237329|... |
| Match: gi|91069895|gb|ABE10824.1| |
score: 256 |
e-value: 3e-66 |
Identity: 48.29% |
Span: 873bp (59.0%) |
Frame: 3 |
| 30S |
| Match: gi|91070108|gb|ABE11032.1| |
score: 255 |
e-value: 3e-66 |
Identity: 48.79% |
Span: 864bp (58.4%) |
Frame: 3 |
| 30S |
| Match: gi|16330162|ref|NP_440890.1| |
score: 254 |
e-value: 6e-66 |
Identity: 50% |
Span: 876bp (59.2%) |
Frame: 3 |
| gi|16330162|ref|NP_440890.1| 30S ribosomal protein S1 [Synechocystis sp. PCC 6803] gi|2500385|sp|P73530|RS1A_SYNY3 30... |
| Match: gi|40641370|emb|CAE51165.1| |
score: 241 |
e-value: 5e-62 |
Identity: 47.77% |
Span: 915bp (61.8%) |
Frame: 3 |
| gi|40641370|emb|CAE51165.1| ribosomal protein S1 homologue [Chlamydomonas reinhardtii] |
| Match: gi|35211550|dbj|BAC88928.1| |
score: 240 |
e-value: 1e-61 |
Identity: 48.63% |
Span: 873bp (59.0%) |
Frame: 3 |
| gi|35211550|dbj|BAC88928.1| 30S ribosomal protein S1 [Gloeobacter violaceus PCC 7421] >gi|37520556|ref|NP_923933.1| 3... |
| Match: gi|32307552|gb|AAP79181.1| |
score: 223 |
e-value: 2e-56 |
Identity: 47.35% |
Span: 897bp (60.6%) |
Frame: 3 |
| gi|32307552|gb|AAP79181.1| ribosomal protein rpS1 [Bigelowiella natans] |
| Match: gi|17130424|dbj|BAB73035.1| |
score: 181 |
e-value: 1e-43 |
Identity: 38.93% |
Span: 834bp (56.4%) |
Frame: 3 |
| gi|17130424|dbj|BAB73035.1| 30S ribosomal protein S1 [Nostoc sp. PCC 7120] >gi|25311777|pir||AC1941 30S ribosomal pro... |
| Match: gi|75909936|ref|YP_324232.1| |
score: 181 |
e-value: 6e-44 |
Identity: 37.72% |
Span: 861bp (58.2%) |
Frame: 3 |
| gi|75909936|ref|YP_324232.1| RNA binding S1 [Anabaena variabilis ATCC 29413] >gi|75703661|gb|ABA23337.1| RNA binding ... |
| Match: gi|67922621|ref|ZP_00516127.1| |
score: 176 |
e-value: 2e-42 |
Identity: 38.01% |
Span: 870bp (58.8%) |
Frame: 3 |
| gi|67922621|ref|ZP_00516127.1| RNA binding S1 [Crocosphaera watsonii WH 8501] >gi|67855549|gb|EAM50802.1| RNA binding... |
| Match: gi|110167169|gb|ABG51709.1| |
score: 175 |
e-value: 4e-42 |
Identity: 37.54% |
Span: 867bp (58.6%) |
Frame: 3 |
| RNA |
| Match: gi|23126004|ref|ZP_00107914.1| |
score: 167 |
e-value: 9e-40 |
Identity: 35.86% |
Span: 861bp (58.2%) |
Frame: 3 |
| gi|23126004|ref|ZP_00107914.1| COG0539: Ribosomal protein S1 [Nostoc punctiforme] |
| Match: gi|56750057|ref|YP_170758.1| |
score: 166 |
e-value: 3e-39 |
Identity: 36.88% |
Span: 843bp (57.0%) |
Frame: 3 |
| gi|56750057|ref|YP_170758.1| nucleic acid binding protein [Synechococcus elongatus PCC 6301] >gi|22002498|gb|AAM82650... |
| Match: gi|86608329|ref|YP_477091.1| |
score: 164 |
e-value: 1e-38 |
Identity: 37.98% |
Span: 852bp (57.6%) |
Frame: 3 |
| putative |
| Match: gi|72383697|ref|YP_293052.1| |
score: 164 |
e-value: 1e-38 |
Identity: 36.92% |
Span: 831bp (56.1%) |
Frame: 3 |
| gi|72383697|ref|YP_293052.1| RNA binding S1 [Prochlorococcus marinus str. NATL2A] >gi|72003547|gb|AAZ59349.1| RNA bin... |
| Match: gi|88807700|ref|ZP_01123212.1| |
score: 162 |
e-value: 5e-38 |
Identity: 37.88% |
Span: 873bp (59.0%) |
Frame: 3 |
| hypothetical |
| Match: gi|87302523|ref|ZP_01085340.1| |
score: 160 |
e-value: 1e-37 |
Identity: 37.01% |
Span: 897bp (60.6%) |
Frame: 3 |
| 30S |
| Match: gi|78196733|gb|ABB34498.1| |
score: 160 |
e-value: 2e-37 |
Identity: 36.79% |
Span: 870bp (58.8%) |
Frame: 3 |
| RNA |
| Match: gi|1276811|gb|AAC08231.1| |
score: 158 |
e-value: 7e-37 |
Identity: 37.79% |
Span: 771bp (52.1%) |
Frame: 3 |
| gi|1276811|gb|AAC08231.1| 30S ribosomal protein S1 [Porphyra purpurea] >gi|1710701|sp|P51345|RR1_PORPU Chloroplast 30... |
| Match: gi|33239981|ref|NP_874923.1| |
score: 157 |
e-value: 2e-36 |
Identity: 35.91% |
Span: 858bp (58.0%) |
Frame: 3 |
| gi|33239981|ref|NP_874923.1| Ribosomal protein S1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237507|... |
| Match: gi|86605910|ref|YP_474673.1| |
score: 155 |
e-value: 6e-36 |
Identity: 36.71% |
Span: 852bp (57.6%) |
Frame: 3 |
| putative |
| Match: gi|84518419|ref|ZP_01005768.1| |
score: 155 |
e-value: 4e-36 |
Identity: 33.55% |
Span: 855bp (57.8%) |
Frame: 3 |
| Ribosomal |
| Match: gi|87123920|ref|ZP_01079770.1| |
score: 154 |
e-value: 8e-36 |
Identity: 35.2% |
Span: 885bp (59.8%) |
Frame: 3 |
| 30S |
| Match: gi|82799326|gb|ABB92252.1| |
score: 154 |
e-value: 1e-35 |
Identity: 36.49% |
Span: 861bp (58.2%) |
Frame: 3 |
| 30S |
| Match: gi|78169498|gb|ABB26595.1| |
score: 154 |
e-value: 1e-35 |
Identity: 36.79% |
Span: 870bp (58.8%) |
Frame: 3 |
| RNA |
| Match: gi|33863501|ref|NP_895061.1| |
score: 153 |
e-value: 2e-35 |
Identity: 35.49% |
Span: 873bp (59.0%) |
Frame: 3 |
| gi|33863501|ref|NP_895061.1| 30S ribosomal protein S1 homolog B, putative Nbp1 [Prochlorococcus marinus str. MIT 9313... |
| Match: gi|33866272|ref|NP_897831.1| |
score: 153 |
e-value: 2e-35 |
Identity: 36.49% |
Span: 861bp (58.2%) |
Frame: 3 |
| gi|33866272|ref|NP_897831.1| 30S ribosomal protein S1 homolog B, putative Nbp1 [Synechococcus sp. WH 8102] gi|3363924... |
| Match: gi|90655490|gb|ABD96330.1| |
score: 152 |
e-value: 3e-35 |
Identity: 36.12% |
Span: 870bp (58.8%) |
Frame: 3 |
| 30S |
| Match: gi|90655539|gb|ABD96378.1| |
score: 152 |
e-value: 4e-35 |
Identity: 35.81% |
Span: 861bp (58.2%) |
Frame: 3 |
| 30S |
| Match: gi|90655436|gb|ABD96277.1| |
score: 152 |
e-value: 3e-35 |
Identity: 35.28% |
Span: 900bp (60.8%) |
Frame: 3 |
| 30S |
| Match: gi|16330820|ref|NP_441548.1| |
score: 146 |
e-value: 2e-33 |
Identity: 34.41% |
Span: 831bp (56.1%) |
Frame: 3 |
| gi|16330820|ref|NP_441548.1| 30S ribosomal protein S1 [Synechocystis sp. PCC 6803] gi|2500386|sp|P74142|RS1B_SYNY3 30... |
| Match: gi|33861087|ref|NP_892648.1| |
score: 143 |
e-value: 2e-32 |
Identity: 33.7% |
Span: 825bp (55.7%) |
Frame: 3 |
| gi|33861087|ref|NP_892648.1| 30S ribosomal protein S1 homolog B, putative Nbp1 [Prochlorococcus marinus subsp. pastor... |
| Match: gi|78712414|gb|ABB49591.1| |
score: 137 |
e-value: 2e-30 |
Identity: 32.04% |
Span: 828bp (55.9%) |
Frame: 3 |
| gi|78712414|gb|ABB49591.1| RNA binding S1 [Prochlorococcus marinus str. MIT 9312] |
| Match: gi|90819100|dbj|BAE92469.1| |
score: 129 |
e-value: 5e-28 |
Identity: 36.94% |
Span: 651bp (44.0%) |
Frame: 3 |
| 30S |
| Match: gi|1146215|gb|AAC83962.1| |
score: 123 |
e-value: 2e-26 |
Identity: 35.02% |
Span: 738bp (49.9%) |
Frame: 3 |
| similar |
| Match: gi|51209897|ref|YP_063561.1| |
score: 121 |
e-value: 7e-26 |
Identity: 30.27% |
Span: 780bp (52.7%) |
Frame: 3 |
| gi|51209897|ref|YP_063561.1| 30S ribosomal protein S1 [Gracilaria tenuistipitata var. liui] >gi|50657651|gb|AAT79636.... |
| Match: gi|52004010|gb|AAU23952.1| |
score: 121 |
e-value: 7e-26 |
Identity: 34.39% |
Span: 726bp (49.1%) |
Frame: 3 |
| gi|52004010|gb|AAU23952.1| Nucleic acid-binding protein [Bacillus licheniformis ATCC 14580] >gi|52786169|ref|YP_09199... |
| Match: gi|53689173|ref|ZP_00064306.2| |
score: 120 |
e-value: 2e-25 |
Identity: 35.74% |
Span: 786bp (53.1%) |
Frame: 3 |
| gi|53689173|ref|ZP_00064306.2| COG0539: Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|1004353|gb|AAA77669.1| |
score: 119 |
e-value: 3e-25 |
Identity: 34.97% |
Span: 813bp (54.9%) |
Frame: 3 |
| gi|1004353|gb|AAA77669.1| ribosomal protein S1 homolog |
| Match: gi|6175044|sp|P50889|RS1_LEULA |
score: 119 |
e-value: 5e-25 |
Identity: 35.54% |
Span: 813bp (54.9%) |
Frame: 3 |
| gi|6175044|sp|P50889|RS1_LEULA 40S ribosomal protein S1 gi|1565296|gb|AAB08978.1| ribosomal protein S1 homolog; seque... |
| Match: gi|10174253|dbj|BAB05355.1| |
score: 119 |
e-value: 4e-25 |
Identity: 33.73% |
Span: 735bp (49.7%) |
Frame: 3 |
| gi|10174253|dbj|BAB05355.1| 30S ribosomal protein S1 [Bacillus halodurans C-125] >gi|15614199|ref|NP_242502.1| 30S ri... |
| Match: gi|1085376|pir||JC4026 |
score: 117 |
e-value: 1e-24 |
Identity: 35.27% |
Span: 780bp (52.7%) |
Frame: 3 |
| gi|1085376|pir||JC4026 ribosomal protein S1-like DNA-binding protein - human |
| Match: gi|22777484|dbj|BAC13756.1| |
score: 117 |
e-value: 1e-24 |
Identity: 32.54% |
Span: 726bp (49.1%) |
Frame: 3 |
| 30S |
| Match: gi|56909882|dbj|BAD64409.1| |
score: 115 |
e-value: 4e-24 |
Identity: 32.95% |
Span: 741bp (50.1%) |
Frame: 3 |
| 30S |
| Match: gi|106891436|ref|ZP_01358622.1| |
score: 115 |
e-value: 4e-24 |
Identity: 32.87% |
Span: 807bp (54.5%) |
Frame: 3 |
| RNA |
| Match: gi|51856497|dbj|BAD40655.1| |
score: 114 |
e-value: 9e-24 |
Identity: 29.8% |
Span: 732bp (49.5%) |
Frame: 3 |
| 30S |
| Match: gi|89342551|ref|ZP_01194787.1| |
score: 114 |
e-value: 1e-23 |
Identity: 32.71% |
Span: 774bp (52.3%) |
Frame: 3 |
| RNA |
| Match: gi|106889181|ref|ZP_01356380.1| |
score: 114 |
e-value: 2e-23 |
Identity: 32.82% |
Span: 726bp (49.1%) |
Frame: 3 |
| RNA |
| Match: gi|90204291|ref|ZP_01206935.1| |
score: 114 |
e-value: 1e-23 |
Identity: 32.71% |
Span: 774bp (52.3%) |
Frame: 3 |
| RNA |
| Match: gi|41407423|ref|NP_960259.1| |
score: 113 |
e-value: 3e-23 |
Identity: 32.96% |
Span: 768bp (51.9%) |
Frame: 3 |
| gi|41407423|ref|NP_960259.1| RpsA [Mycobacterium avium subsp. paratuberculosis str. k10] >gi|41395775|gb|AAS03642.1| ... |
| Match: gi|108799971|ref|YP_640168.1| |
score: 112 |
e-value: 6e-23 |
Identity: 32.34% |
Span: 774bp (52.3%) |
Frame: 3 |
| RNA |
| Match: gi|31792816|ref|NP_855309.1| |
score: 112 |
e-value: 6e-23 |
Identity: 32.58% |
Span: 768bp (51.9%) |
Frame: 3 |
| gi|31792816|ref|NP_855309.1| PROBABLE RIBOSOMAL PROTEIN S1 RPSA [Mycobacterium bovis subsp. bovis AF2122/97] gi|31618... |
| Match: gi|88932467|ref|ZP_01138157.1| |
score: 112 |
e-value: 5e-23 |
Identity: 32.71% |
Span: 774bp (52.3%) |
Frame: 3 |
| RNA |
| Match: gi|7579906|gb|AAF64246.1| |
score: 112 |
e-value: 3e-23 |
Identity: 33.09% |
Span: 774bp (52.3%) |
Frame: 3 |
| gi|7579906|gb|AAF64246.1| 30S ribosomal protein S1 [Corynebacterium ammoniagenes] |
| Match: gi|81428628|ref|YP_395628.1| |
score: 112 |
e-value: 3e-23 |
Identity: 30.42% |
Span: 813bp (54.9%) |
Frame: 3 |
| 30S |
| Match: gi|81428628|ref|YP_395628.1| |
score: 80.9 |
e-value: 1e-13 |
Identity: 28.57% |
Span: 711bp (48.0%) |
Frame: 3 |
| 30S |
| Match: gi|1004353|gb|AAA77669.1| |
score: 78.6 |
e-value: 7e-13 |
Identity: 29.37% |
Span: 852bp (57.6%) |
Frame: 3 |
| gi|1004353|gb|AAA77669.1| ribosomal protein S1 homolog |
| Match: gi|1085376|pir||JC4026 |
score: 78.6 |
e-value: 7e-13 |
Identity: 29.37% |
Span: 852bp (57.6%) |
Frame: 3 |
| gi|1085376|pir||JC4026 ribosomal protein S1-like DNA-binding protein - human |
| Match: gi|1146215|gb|AAC83962.1| |
score: 77 |
e-value: 2e-12 |
Identity: 29.96% |
Span: 735bp (49.7%) |
Frame: 3 |
| similar |
| Match: gi|6175044|sp|P50889|RS1_LEULA |
score: 75.9 |
e-value: 5e-12 |
Identity: 29.04% |
Span: 852bp (57.6%) |
Frame: 3 |
| gi|6175044|sp|P50889|RS1_LEULA 40S ribosomal protein S1 gi|1565296|gb|AAB08978.1| ribosomal protein S1 homolog; seque... |
| Match: gi|108799971|ref|YP_640168.1| |
score: 74.7 |
e-value: 1e-11 |
Identity: 30.61% |
Span: 696bp (47.0%) |
Frame: 3 |
| RNA |
| Match: gi|90204291|ref|ZP_01206935.1| |
score: 72.4 |
e-value: 5e-11 |
Identity: 30.2% |
Span: 696bp (47.0%) |
Frame: 3 |
| RNA |
| Match: gi|52004010|gb|AAU23952.1| |
score: 72.4 |
e-value: 5e-11 |
Identity: 28.74% |
Span: 726bp (49.1%) |
Frame: 3 |
| gi|52004010|gb|AAU23952.1| Nucleic acid-binding protein [Bacillus licheniformis ATCC 14580] >gi|52786169|ref|YP_09199... |
| Match: gi|89342551|ref|ZP_01194787.1| |
score: 72.4 |
e-value: 5e-11 |
Identity: 30.2% |
Span: 696bp (47.0%) |
Frame: 3 |
| RNA |
| Match: gi|53689173|ref|ZP_00064306.2| |
score: 71.2 |
e-value: 1e-10 |
Identity: 28.71% |
Span: 852bp (57.6%) |
Frame: 3 |
| gi|53689173|ref|ZP_00064306.2| COG0539: Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|41407423|ref|NP_960259.1| |
score: 70.9 |
e-value: 2e-10 |
Identity: 29.8% |
Span: 696bp (47.0%) |
Frame: 3 |
| gi|41407423|ref|NP_960259.1| RpsA [Mycobacterium avium subsp. paratuberculosis str. k10] >gi|41395775|gb|AAS03642.1| ... |
| Match: gi|22777484|dbj|BAC13756.1| |
score: 69.7 |
e-value: 3e-10 |
Identity: 25.63% |
Span: 762bp (51.5%) |
Frame: 3 |
| 30S |
| Match: gi|31792816|ref|NP_855309.1| |
score: 68.9 |
e-value: 6e-10 |
Identity: 29.39% |
Span: 696bp (47.0%) |
Frame: 3 |
| gi|31792816|ref|NP_855309.1| PROBABLE RIBOSOMAL PROTEIN S1 RPSA [Mycobacterium bovis subsp. bovis AF2122/97] gi|31618... |
| Match: gi|7579906|gb|AAF64246.1| |
score: 68.9 |
e-value: 6e-10 |
Identity: 28.74% |
Span: 702bp (47.4%) |
Frame: 3 |
| gi|7579906|gb|AAF64246.1| 30S ribosomal protein S1 [Corynebacterium ammoniagenes] |
| Match: gi|88932467|ref|ZP_01138157.1| |
score: 67.4 |
e-value: 2e-09 |
Identity: 28.57% |
Span: 696bp (47.0%) |
Frame: 3 |
| RNA |
| Match: gi|106889181|ref|ZP_01356380.1| |
score: 64.3 |
e-value: 1e-08 |
Identity: 36.63% |
Span: 288bp (19.5%) |
Frame: 3 |
| RNA |
| Match: gi|56909882|dbj|BAD64409.1| |
score: 61.6 |
e-value: 9e-08 |
Identity: 25.97% |
Span: 738bp (49.9%) |
Frame: 3 |
| 30S |
| Match: gi|106891436|ref|ZP_01358622.1| |
score: 60.1 |
e-value: 3e-07 |
Identity: 32.67% |
Span: 288bp (19.5%) |
Frame: 3 |
| RNA |
| Match: gi|10174253|dbj|BAB05355.1| |
score: 58.5 |
e-value: 8e-07 |
Identity: 23.81% |
Span: 783bp (52.9%) |
Frame: 3 |
| gi|10174253|dbj|BAB05355.1| 30S ribosomal protein S1 [Bacillus halodurans C-125] >gi|15614199|ref|NP_242502.1| 30S ri... |
| Match: gi|51856497|dbj|BAD40655.1| |
score: 58.2 |
e-value: 1e-06 |
Identity: 28.71% |
Span: 288bp (19.5%) |
Frame: 3 |
| 30S |
|
| 381 lower scoring hits censored -- only 100 best hits are stored. |
