| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At3G52380.1 |
score: 283 |
e-value: 1e-76 |
Identity: 66.34% |
Span: 612bp (48.5%) |
Frame: 1 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At2G37220.1 |
score: 151 |
e-value: 7e-37 |
Identity: 39.29% |
Span: 558bp (44.3%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At1G60000.1 |
score: 142 |
e-value: 4e-34 |
Identity: 37.89% |
Span: 570bp (45.2%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At4G24770.1 |
score: 142 |
e-value: 4e-34 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At5G50250.1 |
score: 137 |
e-value: 2e-32 |
Identity: 38.74% |
Span: 567bp (45.0%) |
Frame: 1 |
| 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, p... |
| Match: At3G52150.1 |
score: 136 |
e-value: 2e-32 |
Identity: 39.57% |
Span: 561bp (44.5%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:19353052-19354068 FORWARD |
| Match: At3G52150.2 |
score: 136 |
e-value: 2e-32 |
Identity: 39.57% |
Span: 561bp (44.5%) |
Frame: 1 |
| RNA binding | chr3:19353052-19354068 FORWARD |
| Match: At3G53460.2 |
score: 133 |
e-value: 3e-31 |
Identity: 35.62% |
Span: 558bp (44.3%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At2G35410.1 |
score: 118 |
e-value: 9e-27 |
Identity: 37.78% |
Span: 537bp (42.6%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14905420-14906669 FORWARD |
| Match: At1G01080.1 |
score: 110 |
e-value: 2e-24 |
Identity: 36.32% |
Span: 555bp (44.0%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr1:45503-46789 REVERSE |
| Match: At1G01080.2 |
score: 108 |
e-value: 9e-24 |
Identity: 36.65% |
Span: 555bp (44.0%) |
Frame: 1 |
| RNA binding | chr1:45503-46789 REVERSE |
| Match: At4G09040.1 |
score: 84.3 |
e-value: 1e-16 |
Identity: 28.3% |
Span: 633bp (50.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:5795072-5797312 REVERSE |
| Match: At3G16380.1 |
score: 83.6 |
e-value: 2e-16 |
Identity: 30.65% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At3G53460.1 |
score: 83.6 |
e-value: 2e-16 |
Identity: 45.24% |
Span: 252bp (20.0%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At1G49760.1 |
score: 83.2 |
e-value: 3e-16 |
Identity: 28.1% |
Span: 603bp (47.8%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At4G24770.1 |
score: 83.2 |
e-value: 3e-16 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| Symbols: ATRBP31, CP31, ATRBP33, RBP31 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding | chr4:12766233-12767962 RE... |
| Match: At2G23350.1 |
score: 82.4 |
e-value: 5e-16 |
Identity: 28.05% |
Span: 492bp (39.0%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At2G18510.1 |
score: 81.6 |
e-value: 9e-16 |
Identity: 28.88% |
Span: 558bp (44.3%) |
Frame: 1 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At3G19130.1 |
score: 81.6 |
e-value: 9e-16 |
Identity: 28.04% |
Span: 558bp (44.3%) |
Frame: 1 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
| Match: At1G11650.2 |
score: 80.5 |
e-value: 2e-15 |
Identity: 24.77% |
Span: 615bp (48.8%) |
Frame: 1 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917941 FORWARD |
| Match: At1G11650.1 |
score: 80.5 |
e-value: 2e-15 |
Identity: 24.77% |
Span: 615bp (48.8%) |
Frame: 1 |
| Symbols: ATRBP45B | ATRBP45B; RNA binding | chr1:3914895-3917301 FORWARD |
| Match: At5G54900.1 |
score: 80.5 |
e-value: 2e-15 |
Identity: 25.12% |
Span: 594bp (47.1%) |
Frame: 1 |
| Symbols: ATRBP45A | ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding | chr5:22312638-22315352 FORWARD |
| Match: At5G19350.1 |
score: 80.5 |
e-value: 2e-15 |
Identity: 23.83% |
Span: 573bp (45.4%) |
Frame: 1 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At2G36660.1 |
score: 79 |
e-value: 6e-15 |
Identity: 28.26% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At3G07810.1 |
score: 77.8 |
e-value: 1e-14 |
Identity: 30.54% |
Span: 492bp (39.0%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At3G07810.2 |
score: 77.8 |
e-value: 1e-14 |
Identity: 30.54% |
Span: 492bp (39.0%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G53460.1 |
score: 77.4 |
e-value: 2e-14 |
Identity: 46.05% |
Span: 228bp (18.1%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G13224.2 |
score: 76.6 |
e-value: 3e-14 |
Identity: 26.8% |
Span: 570bp (45.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At3G26420.1 |
score: 76.3 |
e-value: 4e-14 |
Identity: 42.5% |
Span: 240bp (19.0%) |
Frame: 1 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At2G23350.1 |
score: 75.9 |
e-value: 5e-14 |
Identity: 30.48% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At5G06210.1 |
score: 75.9 |
e-value: 5e-14 |
Identity: 45.33% |
Span: 225bp (17.8%) |
Frame: 1 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At5G55550.2 |
score: 75.1 |
e-value: 8e-14 |
Identity: 27.46% |
Span: 564bp (44.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G55550.3 |
score: 75.1 |
e-value: 8e-14 |
Identity: 27.46% |
Span: 564bp (44.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22519361-22520884 REVERSE |
| Match: At5G47620.2 |
score: 75.1 |
e-value: 8e-14 |
Identity: 30% |
Span: 561bp (44.5%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At5G47620.1 |
score: 75.1 |
e-value: 8e-14 |
Identity: 30% |
Span: 561bp (44.5%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr5:19319774-19321504 REVERSE |
| Match: At5G55550.1 |
score: 75.1 |
e-value: 8e-14 |
Identity: 27.46% |
Span: 564bp (44.7%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:22519303-22520884 REVERSE |
| Match: At3G13224.1 |
score: 74.7 |
e-value: 1e-13 |
Identity: 27.75% |
Span: 510bp (40.4%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At3G23830.1 |
score: 74.3 |
e-value: 1e-13 |
Identity: 38.83% |
Span: 309bp (24.5%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At3G23830.2 |
score: 74.3 |
e-value: 1e-13 |
Identity: 38.83% |
Span: 309bp (24.5%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At1G49760.1 |
score: 73.6 |
e-value: 2e-13 |
Identity: 28.99% |
Span: 570bp (45.2%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G21660.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 40.96% |
Span: 249bp (19.7%) |
Frame: 1 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
| Match: At4G26650.1 |
score: 73.2 |
e-value: 3e-13 |
Identity: 28.36% |
Span: 570bp (45.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr4:13445558-13447598 FORWARD |
| Match: At4G26650.2 |
score: 73.2 |
e-value: 3e-13 |
Identity: 28.36% |
Span: 570bp (45.2%) |
Frame: 1 |
| RNA binding | chr4:13445271-13447598 FORWARD |
| Match: At2G21660.2 |
score: 73.2 |
e-value: 3e-13 |
Identity: 40.96% |
Span: 249bp (19.7%) |
Frame: 1 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
| Match: At4G34110.1 |
score: 72.8 |
e-value: 4e-13 |
Identity: 28.19% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At5G40490.1 |
score: 72 |
e-value: 7e-13 |
Identity: 25.67% |
Span: 561bp (44.5%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr5:16242711-16244651 FORWARD |
| Match: At3G08000.1 |
score: 72 |
e-value: 7e-13 |
Identity: 43.18% |
Span: 264bp (20.9%) |
Frame: 1 |
| RNA-binding protein, putative | chr3:2555040-2555835 REVERSE |
| Match: At1G54080.1 |
score: 71.2 |
e-value: 1e-12 |
Identity: 28.65% |
Span: 534bp (42.3%) |
Frame: 1 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At2G16940.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 25.82% |
Span: 621bp (49.2%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr2:7349951-7354134 REVERSE |
| Match: At1G17640.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 28.3% |
Span: 477bp (37.8%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
| Match: At4G27000.1 |
score: 70.9 |
e-value: 2e-12 |
Identity: 22.89% |
Span: 594bp (47.1%) |
Frame: 1 |
| RNA-binding protein 45 (RBP45), putative | chr4:13554989-13557769 REVERSE |
| Match: At4G13850.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 44.3% |
Span: 237bp (18.8%) |
Frame: 1 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At5G61030.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 37.8% |
Span: 246bp (19.5%) |
Frame: 1 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At5G61030.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 39.51% |
Span: 243bp (19.3%) |
Frame: 1 |
| Symbols: GR-RBP3 | GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding | chr5:24578096-24579378 FORWARD |
| Match: At3G53460.1 |
score: 70.5 |
e-value: 2e-12 |
Identity: 41.94% |
Span: 279bp (22.1%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At4G13850.2 |
score: 70.5 |
e-value: 2e-12 |
Identity: 44.3% |
Span: 237bp (18.8%) |
Frame: 1 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At3G53460.2 |
score: 70.5 |
e-value: 2e-12 |
Identity: 41.94% |
Span: 279bp (22.1%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At1G71770.1 |
score: 70.1 |
e-value: 3e-12 |
Identity: 27.32% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At3G53460.2 |
score: 70.1 |
e-value: 3e-12 |
Identity: 39.76% |
Span: 243bp (19.3%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At3G53460.1 |
score: 70.1 |
e-value: 3e-12 |
Identity: 39.76% |
Span: 243bp (19.3%) |
Frame: 1 |
| Symbols: CP29 | CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding | chr3:19830716-19832401 REVERSE |
| Match: At1G17370.1 |
score: 69.7 |
e-value: 3e-12 |
Identity: 28.09% |
Span: 534bp (42.3%) |
Frame: 1 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At3G14100.1 |
score: 69.7 |
e-value: 3e-12 |
Identity: 29.21% |
Span: 534bp (42.3%) |
Frame: 1 |
| oligouridylate-binding protein, putative | chr3:4673034-4675957 FORWARD |
| Match: At3G55340.1 |
score: 69.3 |
e-value: 5e-12 |
Identity: 25% |
Span: 624bp (49.5%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:20526649-20528809 FORWARD |
| Match: At1G22760.1 |
score: 69.3 |
e-value: 5e-12 |
Identity: 27.32% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At1G71770.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 28.05% |
Span: 492bp (39.0%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G74230.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 41.46% |
Span: 246bp (19.5%) |
Frame: 1 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At1G49600.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 26.52% |
Span: 534bp (42.3%) |
Frame: 1 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At3G16380.1 |
score: 68.6 |
e-value: 8e-12 |
Identity: 30.22% |
Span: 546bp (43.3%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At4G39260.3 |
score: 68.2 |
e-value: 1e-11 |
Identity: 38.75% |
Span: 240bp (19.0%) |
Frame: 1 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At1G74230.1 |
score: 66.2 |
e-value: 4e-11 |
Identity: 39.51% |
Span: 243bp (19.3%) |
Frame: 1 |
| Symbols: GR-RBP5 | GR-RBP5 (glycine-rich RNA-binding protein 5); RNA binding | chr1:27919007-27920518 FORWARD |
| Match: At3G16380.1 |
score: 63.9 |
e-value: 2e-10 |
Identity: 28% |
Span: 525bp (41.6%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At5G06210.1 |
score: 62.8 |
e-value: 4e-10 |
Identity: 40.79% |
Span: 228bp (18.1%) |
Frame: 1 |
| RNA-binding protein, putative | chr5:1878498-1879516 FORWARD |
| Match: At1G22760.1 |
score: 62 |
e-value: 7e-10 |
Identity: 24.43% |
Span: 528bp (41.9%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At2G36660.1 |
score: 61.6 |
e-value: 9e-10 |
Identity: 27.98% |
Span: 492bp (39.0%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At3G23830.1 |
score: 60.8 |
e-value: 2e-09 |
Identity: 36.49% |
Span: 222bp (17.6%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA bindin... |
| Match: At3G23830.2 |
score: 60.8 |
e-value: 2e-09 |
Identity: 36.49% |
Span: 222bp (17.6%) |
Frame: 1 |
| Symbols: GR-RBP4, GRP4 | GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding | chr3:8606769-8607684 REVERSE |
| Match: At1G60000.1 |
score: 60.5 |
e-value: 2e-09 |
Identity: 36.36% |
Span: 231bp (18.3%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At3G08000.1 |
score: 59.3 |
e-value: 5e-09 |
Identity: 38.55% |
Span: 246bp (19.5%) |
Frame: 1 |
| RNA-binding protein, putative | chr3:2555040-2555835 REVERSE |
| Match: At1G60000.1 |
score: 58.2 |
e-value: 1e-08 |
Identity: 35.29% |
Span: 255bp (20.2%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22097343-22098205 REVERSE |
| Match: At4G13850.2 |
score: 57 |
e-value: 2e-08 |
Identity: 34.52% |
Span: 240bp (19.0%) |
Frame: 1 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding | chr4:8021310-8022061 FORWARD |
| Match: At4G13850.1 |
score: 57 |
e-value: 2e-08 |
Identity: 34.52% |
Span: 240bp (19.0%) |
Frame: 1 |
| Symbols: GR-RBP2, ATGRP2 | ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / ... |
| Match: At1G54080.1 |
score: 57 |
e-value: 2e-08 |
Identity: 26.37% |
Span: 492bp (39.0%) |
Frame: 1 |
| Symbols: UBP1A | UBP1A; mRNA 3'-UTR binding | chr1:20187591-20190492 REVERSE |
| Match: At2G21660.1 |
score: 55.1 |
e-value: 9e-08 |
Identity: 37.84% |
Span: 222bp (17.6%) |
Frame: 1 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded D... |
| Match: At2G21660.2 |
score: 55.1 |
e-value: 9e-08 |
Identity: 37.84% |
Span: 222bp (17.6%) |
Frame: 1 |
| Symbols: GR-RBP7, CCR2, ATGRP7 | ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding | chr2:9272557-9273... |
| Match: At1G17370.1 |
score: 54.7 |
e-value: 1e-07 |
Identity: 23.9% |
Span: 558bp (44.3%) |
Frame: 1 |
| Symbols: UBP1B | UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B); mRNA 3'-UTR binding | chr1:5951835-5954818 REVERSE |
| Match: At3G07810.2 |
score: 53.9 |
e-value: 2e-07 |
Identity: 30.06% |
Span: 486bp (38.5%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At3G07810.1 |
score: 53.9 |
e-value: 2e-07 |
Identity: 30.06% |
Span: 486bp (38.5%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At1G01080.2 |
score: 53.5 |
e-value: 3e-07 |
Identity: 36.99% |
Span: 219bp (17.4%) |
Frame: 1 |
| RNA binding | chr1:45503-46789 REVERSE |
| Match: At1G01080.1 |
score: 53.5 |
e-value: 3e-07 |
Identity: 36.99% |
Span: 219bp (17.4%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr1:45503-46789 REVERSE |
| Match: At4G39260.3 |
score: 53.5 |
e-value: 3e-07 |
Identity: 33.78% |
Span: 222bp (17.6%) |
Frame: 1 |
| Symbols: GR-RBP8, ATGRP8, CCR1 | ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8);... |
| Match: At3G26420.1 |
score: 52.8 |
e-value: 4e-07 |
Identity: 29.27% |
Span: 246bp (19.5%) |
Frame: 1 |
| Symbols: ATRZ-1A | ATRZ-1A; RNA binding / nucleotide binding | chr3:9673190-9674292 FORWARD |
| Match: At3G13224.1 |
score: 51.2 |
e-value: 1e-06 |
Identity: 35.38% |
Span: 195bp (15.5%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256021 FORWARD |
| Match: At3G13224.2 |
score: 51.2 |
e-value: 1e-06 |
Identity: 35.38% |
Span: 195bp (15.5%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr3:4254855-4256628 FORWARD |
| Match: At5G19350.1 |
score: 50.8 |
e-value: 2e-06 |
Identity: 23.91% |
Span: 498bp (39.5%) |
Frame: 1 |
| RNA-binding protein 45 (RBP45), putative | chr5:6518980-6521297 FORWARD |
| Match: At1G17640.1 |
score: 49.7 |
e-value: 4e-06 |
Identity: 27.93% |
Span: 333bp (26.4%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein | chr1:6067387-6069091 REVERSE |
| Match: At3G07810.1 |
score: 49.3 |
e-value: 5e-06 |
Identity: 30% |
Span: 240bp (19.0%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495058 FORWARD |
| Match: At3G07810.2 |
score: 49.3 |
e-value: 5e-06 |
Identity: 30% |
Span: 240bp (19.0%) |
Frame: 1 |
| heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | chr3:2492881-2495108 FORWARD |
| Match: At2G23350.1 |
score: 47 |
e-value: 2e-05 |
Identity: 28.57% |
Span: 231bp (18.3%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At3G16380.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 31.65% |
Span: 237bp (18.8%) |
Frame: 1 |
| Symbols: PAB6 | PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | chr3:5558682-5560999... |
| Match: At2G23350.1 |
score: 44.7 |
e-value: 0.0001 |
Identity: 29.41% |
Span: 255bp (20.2%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
|
| 260 lower scoring hits censored -- only 100 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|20005|emb|CAA37879.1| |
score: 417 |
e-value: 7e-115 |
Identity: 73.9% |
Span: 945bp (74.9%) |
Frame: 1 |
| gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum] >gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucle... |
| Match: gi|311952|emb|CAA41253.1| |
score: 410 |
e-value: 8e-113 |
Identity: 72.96% |
Span: 945bp (74.9%) |
Frame: 1 |
| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris] |
| Match: gi|20009|emb|CAA43429.1| |
score: 363 |
e-value: 9e-99 |
Identity: 73.93% |
Span: 840bp (66.6%) |
Frame: 1 |
| ribonucleoprotein [Nicotiana tabacum] |
| Match: gi|15231200|ref|NP_190806.1| |
score: 283 |
e-value: 9e-75 |
Identity: 66.34% |
Span: 612bp (48.5%) |
Frame: 1 |
| CP33; RNA binding [Arabidopsis thaliana] >gi681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana] >g... |
| Match: gi|681912|dbj|BAA06523.1| |
score: 280 |
e-value: 8e-74 |
Identity: 65.85% |
Span: 612bp (48.5%) |
Frame: 1 |
| RNA-binding protein cp33 [Arabidopsis thaliana] |
| Match: gi|17064758|gb|AAL32533.1| |
score: 279 |
e-value: 2e-73 |
Identity: 65.37% |
Span: 612bp (48.5%) |
Frame: 1 |
| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana] |
| Match: gi|3550485|emb|CAA11894.1| |
score: 217 |
e-value: 8e-55 |
Identity: 50.74% |
Span: 606bp (48.1%) |
Frame: 1 |
| cp33Hv [Hordeum vulgare subsp. vulgare] |
| Match: gi|50934311|ref|XP_476683.1| |
score: 216 |
e-value: 2e-54 |
Identity: 51.98% |
Span: 606bp (48.1%) |
Frame: 1 |
| gi|50934311|ref|XP_476683.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] >gi|51978948|ref|X... |
| Match: gi|19754|emb|CAA43427.1| |
score: 172 |
e-value: 4e-41 |
Identity: 44.67% |
Span: 591bp (46.9%) |
Frame: 1 |
| gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] >gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa rib... |
| Match: gi|19710|emb|CAA46233.1| |
score: 170 |
e-value: 1e-40 |
Identity: 33.45% |
Span: 837bp (66.4%) |
Frame: 1 |
| gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia] >gi|1350821|sp|P49314|ROC2_NICPL 31 kDa r... |
| Match: gi|14135|emb|CAA43428.1| |
score: 170 |
e-value: 1e-40 |
Identity: 41.43% |
Span: 579bp (45.9%) |
Frame: 1 |
| gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris] >gi|12230585|sp|Q08937|ROC2_NICSY 29 kDa rib... |
| Match: gi|34913270|ref|NP_917982.1| |
score: 167 |
e-value: 1e-39 |
Identity: 45.27% |
Span: 573bp (45.4%) |
Frame: 1 |
| gi|34913270|ref|NP_917982.1| putative ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|22296371|dbj|BAC1... |
| Match: gi|19708|emb|CAA46234.1| |
score: 166 |
e-value: 3e-39 |
Identity: 43.28% |
Span: 591bp (46.9%) |
Frame: 1 |
| gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] >gi|1350820|sp|P49313|ROC1_NICPL 30 kDa r... |
| Match: gi|17432522|gb|AAL39067.1| |
score: 165 |
e-value: 5e-39 |
Identity: 43.48% |
Span: 588bp (46.6%) |
Frame: 1 |
| gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|50920707|ref|XP_470714.1| |
score: 157 |
e-value: 8e-37 |
Identity: 43.09% |
Span: 561bp (44.5%) |
Frame: 1 |
| gi|50920707|ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa] >gi|18921322|gb|AAL82527.1| putative ribonucle... |
| Match: gi|92887758|gb|ABE89041.1| |
score: 154 |
e-value: 6e-36 |
Identity: 42.93% |
Span: 573bp (45.4%) |
Frame: 1 |
| RNA-binding |
| Match: gi|15228102|ref|NP_181259.1| |
score: 151 |
e-value: 5e-35 |
Identity: 39.29% |
Span: 558bp (44.3%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi122306... |
| Match: gi|21617920|gb|AAM66970.1| |
score: 151 |
e-value: 5e-35 |
Identity: 39.29% |
Span: 558bp (44.3%) |
Frame: 1 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|558629|emb|CAA57551.1| |
score: 150 |
e-value: 1e-34 |
Identity: 39.36% |
Span: 564bp (44.7%) |
Frame: 1 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|1015370|gb|AAA79045.1| |
score: 150 |
e-value: 9e-35 |
Identity: 39.47% |
Span: 570bp (45.2%) |
Frame: 1 |
| gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein |
| Match: gi|50915836|ref|XP_468382.1| |
score: 148 |
e-value: 5e-34 |
Identity: 40.78% |
Span: 537bp (42.6%) |
Frame: 1 |
| gi|50915836|ref|XP_468382.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica cultivar-group)] >gi... |
| Match: gi|3550467|emb|CAA06469.1| |
score: 147 |
e-value: 1e-33 |
Identity: 39.57% |
Span: 561bp (44.5%) |
Frame: 1 |
| gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|2104687|emb|CAA66479.1| |
score: 147 |
e-value: 1e-33 |
Identity: 40.78% |
Span: 537bp (42.6%) |
Frame: 1 |
| RNA- or ssDNA-binding protein [Vicia faba var. minor] |
| Match: gi|388621|gb|AAA33039.1| |
score: 146 |
e-value: 2e-33 |
Identity: 41.08% |
Span: 555bp (44.0%) |
Frame: 1 |
| RNA-binding protein [Mesembryanthemum crystallinum] |
| Match: gi|19750|emb|CAA37880.1| |
score: 145 |
e-value: 3e-33 |
Identity: 40% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris] >gi|133246|sp|P19682|ROC3_NICSY 28 kDa ribonu... |
| Match: gi|92889382|gb|ABE89859.1| |
score: 145 |
e-value: 4e-33 |
Identity: 34.75% |
Span: 846bp (67.1%) |
Frame: 1 |
| RNA-binding |
| Match: gi|52076138|dbj|BAD46651.1| |
score: 145 |
e-value: 5e-33 |
Identity: 40.11% |
Span: 561bp (44.5%) |
Frame: 1 |
| gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] >gi|520761... |
| Match: gi|2443390|dbj|BAA22411.1| |
score: 143 |
e-value: 1e-32 |
Identity: 38.5% |
Span: 561bp (44.5%) |
Frame: 1 |
| gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum] |
| Match: gi|99565|pir||S15348 |
score: 142 |
e-value: 3e-32 |
Identity: 40% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|23505889|gb|AAN28804.1| |
score: 142 |
e-value: 3e-32 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] >gi|15294254|gb|AAK95304.1| AT4g24770/F22K18_30... |
| Match: gi|681906|dbj|BAA06520.1| |
score: 142 |
e-value: 3e-32 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|21309|emb|CAA41023.1| |
score: 142 |
e-value: 3e-32 |
Identity: 40% |
Span: 555bp (44.0%) |
Frame: 1 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|16490|emb|CAA46347.1| |
score: 142 |
e-value: 3e-32 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana] >gi|7269328|emb|CAB79387.1| RNA-binding protein R... |
| Match: gi|475719|gb|AAA18379.1| |
score: 142 |
e-value: 3e-32 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|15218972|ref|NP_176208.1| |
score: 142 |
e-value: 3e-32 |
Identity: 37.89% |
Span: 570bp (45.2%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|510240|emb|CAA43420.1| |
score: 142 |
e-value: 3e-32 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 142 |
e-value: 3e-32 |
Identity: 40% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|19741|emb|CAA40364.1| |
score: 142 |
e-value: 3e-32 |
Identity: 38.38% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris] >gi|19756|emb|CAA37885.1| unnamed ... |
| Match: gi|681908|dbj|BAA06521.1| |
score: 142 |
e-value: 3e-32 |
Identity: 36.82% |
Span: 591bp (46.9%) |
Frame: 1 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|19032260|emb|CAD18921.1| |
score: 141 |
e-value: 6e-32 |
Identity: 38.1% |
Span: 567bp (45.0%) |
Frame: 1 |
| RNA-binding protein precursor [Persea americana] |
| Match: gi|168526|gb|AAA33486.1| |
score: 140 |
e-value: 2e-31 |
Identity: 38.02% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|168526|gb|AAA33486.1| nucleic acid-binding protein |
| Match: gi|50948431|ref|XP_483743.1| |
score: 139 |
e-value: 4e-31 |
Identity: 36.22% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|50948431|ref|XP_483743.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] >gi|51965... |
| Match: gi|1054915|gb|AAA81023.1| |
score: 138 |
e-value: 6e-31 |
Identity: 41.4% |
Span: 555bp (44.0%) |
Frame: 1 |
| gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] |
| Match: gi|2330647|emb|CAA74889.1| |
score: 137 |
e-value: 8e-31 |
Identity: 39.46% |
Span: 555bp (44.0%) |
Frame: 1 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|15240641|ref|NP_199836.1| |
score: 137 |
e-value: 1e-30 |
Identity: 38.74% |
Span: 567bp (45.0%) |
Frame: 1 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|50899388|ref|XP_450482.1| |
score: 137 |
e-value: 1e-30 |
Identity: 38.02% |
Span: 570bp (45.2%) |
Frame: 1 |
| gi|50899388|ref|XP_450482.1| putative plastid-specific ribosomal protein 2 precursor [Oryza sativa (japonica cultivar... |
| Match: gi|3550483|emb|CAA11893.1| |
score: 136 |
e-value: 2e-30 |
Identity: 35.05% |
Span: 582bp (46.2%) |
Frame: 1 |
| gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] |
| Match: gi|30693595|ref|NP_566958.3| |
score: 136 |
e-value: 2e-30 |
Identity: 39.57% |
Span: 561bp (44.5%) |
Frame: 1 |
| gi|30693595|ref|NP_566958.3| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|17979394|gb|AAL... |
| Match: gi|19032262|emb|CAD18922.1| |
score: 136 |
e-value: 2e-30 |
Identity: 34.85% |
Span: 582bp (46.2%) |
Frame: 1 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|681904|dbj|BAA06519.1| |
score: 133 |
e-value: 2e-29 |
Identity: 35.62% |
Span: 558bp (44.3%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|30693824|ref|NP_850692.1| |
score: 133 |
e-value: 2e-29 |
Identity: 35.62% |
Span: 558bp (44.3%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|99029149|gb|ABF60862.1| |
score: 133 |
e-value: 2e-29 |
Identity: 37.63% |
Span: 582bp (46.2%) |
Frame: 1 |
| GRSF |
| Match: gi|7578881|gb|AAF64167.1| |
score: 132 |
e-value: 3e-29 |
Identity: 39.11% |
Span: 537bp (42.6%) |
Frame: 1 |
| gi|7578881|gb|AAF64167.1| plastid-specific ribosomal protein 2 precursor [Spinacia oleracea] |
| Match: gi|475720|gb|AAA18380.1| |
score: 124 |
e-value: 9e-27 |
Identity: 37.95% |
Span: 498bp (39.5%) |
Frame: 1 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|4678944|emb|CAB41335.1| |
score: 121 |
e-value: 6e-26 |
Identity: 38.22% |
Span: 552bp (43.8%) |
Frame: 1 |
| putative protein [Arabidopsis thaliana] |
| Match: gi|15226983|ref|NP_181084.1| |
score: 118 |
e-value: 7e-25 |
Identity: 37.78% |
Span: 537bp (42.6%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi360814... |
| Match: gi|417556|sp|P32588|PUB1_YEAST |
score: 114 |
e-value: 7e-24 |
Identity: 33.86% |
Span: 567bp (45.0%) |
Frame: 1 |
| gi|417556|sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 (ARS consensus binding... |
| Match: gi|6324312|ref|NP_014382.1| |
score: 114 |
e-value: 7e-24 |
Identity: 33.86% |
Span: 567bp (45.0%) |
Frame: 1 |
| gi|6324312|ref|NP_014382.1| abundant mRNP-component protein hypothesized to bind a pool of non-translatable mRNAs. no... |
| Match: gi|172438|gb|AAA02808.1| |
score: 114 |
e-value: 7e-24 |
Identity: 33.86% |
Span: 567bp (45.0%) |
Frame: 1 |
| gi|172438|gb|AAA02808.1| RNA-binding protein |
| Match: gi|50928389|ref|XP_473722.1| |
score: 112 |
e-value: 4e-23 |
Identity: 36.13% |
Span: 567bp (45.0%) |
Frame: 1 |
| gi|50928389|ref|XP_473722.1| OSJNBa0086O06.22 [Oryza sativa (japonica cultivar-group)] >gi|38346724|emb|CAE04874.2| O... |
| Match: gi|15223293|ref|NP_171616.1| |
score: 110 |
e-value: 1e-22 |
Identity: 36.32% |
Span: 555bp (44.0%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi169304... |
| Match: gi|79316226|ref|NP_001030925.1| |
score: 108 |
e-value: 7e-22 |
Identity: 36.65% |
Span: 555bp (44.0%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] |
| Match: gi|50946971|ref|XP_483013.1| |
score: 107 |
e-value: 2e-21 |
Identity: 33.33% |
Span: 639bp (50.7%) |
Frame: 1 |
| gi|50946971|ref|XP_483013.1| putative RNA-binding protein cp33 [Oryza sativa (japonica cultivar-group)] >gi|42408160|... |
| Match: gi|90307348|gb|EAS36979.1| |
score: 104 |
e-value: 8e-21 |
Identity: 29.63% |
Span: 561bp (44.5%) |
Frame: 1 |
| hypothetical |
| Match: gi|50940527|ref|XP_479791.1| |
score: 100 |
e-value: 1e-19 |
Identity: 33.72% |
Span: 516bp (40.9%) |
Frame: 1 |
| gi|50940527|ref|XP_479791.1| putative RNA-binding protein RNP-D precursor [Oryza sativa (japonica cultivar-group)] >g... |
| Match: gi|168526|gb|AAA33486.1| |
score: 84 |
e-value: 1e-14 |
Identity: 49.4% |
Span: 246bp (19.5%) |
Frame: 1 |
| gi|168526|gb|AAA33486.1| nucleic acid-binding protein |
| Match: gi|475720|gb|AAA18380.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| gi|475720|gb|AAA18380.1| RNA-binding protein 3 |
| Match: gi|510240|emb|CAA43420.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| RNA binding protein [Arabidopsis thaliana] |
| Match: gi|681908|dbj|BAA06521.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|475719|gb|AAA18379.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| RNA-binding protein 2 [Arabidopsis thaliana] |
| Match: gi|23505889|gb|AAN28804.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] >gi|15294254|gb|AAK95304.1| AT4g24770/F22K18_30... |
| Match: gi|681906|dbj|BAA06520.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| RNA-binding protein cp31 [Arabidopsis thaliana] |
| Match: gi|19741|emb|CAA40364.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 44.71% |
Span: 252bp (20.0%) |
Frame: 1 |
| gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris] >gi|19756|emb|CAA37885.1| unnamed ... |
| Match: gi|16490|emb|CAA46347.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana] >gi|7269328|emb|CAB79387.1| RNA-binding protein R... |
| Match: gi|52076138|dbj|BAD46651.1| |
score: 82.4 |
e-value: 4e-14 |
Identity: 47.62% |
Span: 246bp (19.5%) |
Frame: 1 |
| gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa (japonica cultivar-group)] >gi|520761... |
| Match: gi|2330647|emb|CAA74889.1| |
score: 79.3 |
e-value: 3e-13 |
Identity: 46.99% |
Span: 246bp (19.5%) |
Frame: 1 |
| ribonucleoprotein [Pisum sativum] >gi10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum] |
| Match: gi|34913270|ref|NP_917982.1| |
score: 72 |
e-value: 5e-11 |
Identity: 42.86% |
Span: 231bp (18.3%) |
Frame: 1 |
| gi|34913270|ref|NP_917982.1| putative ribonucleoprotein [Oryza sativa (japonica cultivar-group)] gi|22296371|dbj|BAC1... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 70.5 |
e-value: 2e-10 |
Identity: 41.94% |
Span: 279bp (22.1%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|30693824|ref|NP_850692.1| |
score: 70.5 |
e-value: 2e-10 |
Identity: 41.94% |
Span: 279bp (22.1%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|681904|dbj|BAA06519.1| |
score: 70.1 |
e-value: 2e-10 |
Identity: 39.76% |
Span: 243bp (19.3%) |
Frame: 1 |
| RNA-binding protein cp29 [Arabidopsis thaliana] |
| Match: gi|30693824|ref|NP_850692.1| |
score: 70.1 |
e-value: 2e-10 |
Identity: 39.76% |
Span: 243bp (19.3%) |
Frame: 1 |
| gi|30693824|ref|NP_850692.1| 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) [Arabidopsis thaliana] ... |
| Match: gi|21309|emb|CAA41023.1| |
score: 67.8 |
e-value: 1e-09 |
Identity: 38.39% |
Span: 327bp (25.9%) |
Frame: 1 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|99565|pir||S15348 |
score: 67.8 |
e-value: 1e-09 |
Identity: 38.39% |
Span: 327bp (25.9%) |
Frame: 1 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 67.8 |
e-value: 1e-09 |
Identity: 38.39% |
Span: 327bp (25.9%) |
Frame: 1 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|1015370|gb|AAA79045.1| |
score: 63.2 |
e-value: 3e-08 |
Identity: 34.19% |
Span: 351bp (27.8%) |
Frame: 1 |
| gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein |
| Match: gi|7578881|gb|AAF64167.1| |
score: 62.4 |
e-value: 4e-08 |
Identity: 30.1% |
Span: 309bp (24.5%) |
Frame: 1 |
| gi|7578881|gb|AAF64167.1| plastid-specific ribosomal protein 2 precursor [Spinacia oleracea] |
| Match: gi|92887758|gb|ABE89041.1| |
score: 61.6 |
e-value: 7e-08 |
Identity: 40.48% |
Span: 252bp (20.0%) |
Frame: 1 |
| RNA-binding |
| Match: gi|19032262|emb|CAD18922.1| |
score: 60.8 |
e-value: 1e-07 |
Identity: 37.21% |
Span: 258bp (20.5%) |
Frame: 1 |
| gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana] |
| Match: gi|15218972|ref|NP_176208.1| |
score: 60.5 |
e-value: 2e-07 |
Identity: 36.36% |
Span: 231bp (18.3%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|20009|emb|CAA43429.1| |
score: 59.3 |
e-value: 4e-07 |
Identity: 32.58% |
Span: 252bp (20.0%) |
Frame: 1 |
| ribonucleoprotein [Nicotiana tabacum] |
| Match: gi|15218972|ref|NP_176208.1| |
score: 58.2 |
e-value: 8e-07 |
Identity: 35.29% |
Span: 255bp (20.2%) |
Frame: 1 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative [Arabidopsis thaliana] >gi131947... |
| Match: gi|558629|emb|CAA57551.1| |
score: 57 |
e-value: 2e-06 |
Identity: 35% |
Span: 240bp (19.0%) |
Frame: 1 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|50915836|ref|XP_468382.1| |
score: 56.6 |
e-value: 5e-07 |
Identity: 33.65% |
Span: 312bp (24.7%) |
Frame: 1 |
| gi|50915836|ref|XP_468382.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica cultivar-group)] >gi... |
| Match: gi|2104687|emb|CAA66479.1| |
score: 55.8 |
e-value: 4e-06 |
Identity: 29.47% |
Span: 267bp (21.2%) |
Frame: 1 |
| RNA- or ssDNA-binding protein [Vicia faba var. minor] |
| Match: gi|558629|emb|CAA57551.1| |
score: 54.7 |
e-value: 9e-06 |
Identity: 32.61% |
Span: 276bp (21.9%) |
Frame: 1 |
| chloroplast RNA binding protein [Phaseolus vulgaris] |
| Match: gi|50928389|ref|XP_473722.1| |
score: 53.9 |
e-value: 2e-05 |
Identity: 32.18% |
Span: 258bp (20.5%) |
Frame: 1 |
| gi|50928389|ref|XP_473722.1| OSJNBa0086O06.22 [Oryza sativa (japonica cultivar-group)] >gi|38346724|emb|CAE04874.2| O... |
| Match: gi|15223293|ref|NP_171616.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 36.99% |
Span: 219bp (17.4%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] >gi169304... |
| Match: gi|79316226|ref|NP_001030925.1| |
score: 53.5 |
e-value: 2e-05 |
Identity: 36.99% |
Span: 219bp (17.4%) |
Frame: 1 |
| 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative [Arabidopsis thaliana] |
| Match: gi|50928389|ref|XP_473722.1| |
score: 51.6 |
e-value: 8e-05 |
Identity: 30.38% |
Span: 237bp (18.8%) |
Frame: 1 |
| gi|50928389|ref|XP_473722.1| OSJNBa0086O06.22 [Oryza sativa (japonica cultivar-group)] >gi|38346724|emb|CAE04874.2| O... |
| Match: gi|50915836|ref|XP_468382.1| |
score: 21.9 |
e-value: 5e-07 |
Identity: 37.04% |
Span: 81bp (6.4%) |
Frame: 3 |
| gi|50915836|ref|XP_468382.1| putative RNA-binding protein RNP1 precursor [Oryza sativa (japonica cultivar-group)] >gi... |
|
| 313 lower scoring hits censored -- only 100 best hits are stored. |
