| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At1G07360.1 |
score: 241 |
e-value: 4e-64 |
Identity: 81.48% |
Span: 405bp (49.9%) |
Frame: -3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr1:2260560-2262793 REVERSE |
| Match: At2G29580.1 |
score: 236 |
e-value: 1e-62 |
Identity: 79.26% |
Span: 405bp (49.9%) |
Frame: -3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr2:12659088-12661235 FOR... |
| Match: At5G07060.1 |
score: 196 |
e-value: 2e-50 |
Identity: 68.75% |
Span: 384bp (47.3%) |
Frame: -3 |
| zinc finger (CCCH-type) family protein | chr5:2194395-2195873 REVERSE |
| Match: At5G04210.1 |
score: 84.3 |
e-value: 9e-17 |
Identity: 40.87% |
Span: 330bp (40.6%) |
Frame: -3 |
| RNA recognition motif (RRM)-containing protein | chr5:1155056-1155725 REVERSE |
| Match: At1G47490.1 |
score: 50.1 |
e-value: 2e-06 |
Identity: 38.71% |
Span: 177bp (21.8%) |
Frame: -3 |
| Symbols: ATRBP47C | ATRBP47C; RNA binding | chr1:17427241-17429622 FORWARD |
| Match: At1G47500.1 |
score: 48.5 |
e-value: 5e-06 |
Identity: 38.71% |
Span: 177bp (21.8%) |
Frame: -3 |
| Symbols: ATRBP47C' | ATRBP47C' (RNA-BINDING PROTEIN 47C'); RNA binding | chr1:17435122-17437245 FORWARD |
| Match: At1G49600.1 |
score: 48.1 |
e-value: 7e-06 |
Identity: 37.68% |
Span: 207bp (25.5%) |
Frame: -3 |
| Symbols: ATRBP47A | ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A); RNA binding | chr1:18360904-18363818 RE... |
| Match: At3G19130.1 |
score: 46.6 |
e-value: 2e-05 |
Identity: 39.66% |
Span: 171bp (21.1%) |
Frame: -3 |
| Symbols: ATRBP47B | ATRBP47B (RNA-BINDING PROTEIN 47B); RNA binding | chr3:6611404-6613829 REVERSE |
|
| 17 lower scoring hits censored -- only 8 best hits are stored. |
| genbank/nr [blastx] | Showing best 69 hits recorded |
| Match: gi|82400164|gb|ABB72821.1| |
score: 275 |
e-value: 1e-72 |
Identity: 96.3% |
Span: 405bp (49.9%) |
Frame: -3 |
| RRM-containing RNA-binding protein-like protein [Solanum tuberosum] |
| Match: gi|83283985|gb|ABC01900.1| |
score: 275 |
e-value: 1e-72 |
Identity: 96.3% |
Span: 405bp (49.9%) |
Frame: -3 |
| RRM-containing RNA-binding protein-like protein [Solanum tuberosum] |
| Match: gi|50935893|ref|XP_477474.1| |
score: 259 |
e-value: 1e-67 |
Identity: 87.41% |
Span: 405bp (49.9%) |
Frame: -3 |
| gi|50935893|ref|XP_477474.1| RRM-containing RNA-binding protein-like [Oryza sativa (japonica cultivar-group)] >gi|343... |
| Match: gi|50949165|ref|XP_493940.1| |
score: 255 |
e-value: 2e-66 |
Identity: 87.41% |
Span: 405bp (49.9%) |
Frame: -3 |
| gi|50949165|ref|XP_493940.1| ESTs AU082563(S20379),D15187(C0226), AU082476(C0226),AU082563(S20379) correspond to a re... |
| Match: gi|92888657|gb|ABE89510.1| |
score: 250 |
e-value: 7e-65 |
Identity: 85.19% |
Span: 405bp (49.9%) |
Frame: -3 |
| U2 |
| Match: gi|18390760|ref|NP_563788.1| |
score: 241 |
e-value: 3e-62 |
Identity: 81.48% |
Span: 405bp (49.9%) |
Frame: -3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi753... |
| Match: gi|21387095|gb|AAM47951.1| |
score: 241 |
e-value: 3e-62 |
Identity: 81.48% |
Span: 405bp (49.9%) |
Frame: -3 |
| gi|21387095|gb|AAM47951.1| unknown protein [Arabidopsis thaliana] >gi|15450878|gb|AAK96710.1| Unknown protein [Arabid... |
| Match: gi|15227567|ref|NP_180518.1| |
score: 236 |
e-value: 8e-61 |
Identity: 79.26% |
Span: 405bp (49.9%) |
Frame: -3 |
| zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi753... |
| Match: gi|15240684|ref|NP_196323.1| |
score: 196 |
e-value: 1e-48 |
Identity: 68.75% |
Span: 384bp (47.3%) |
Frame: -3 |
| zinc finger (CCCH-type) family protein [Arabidopsis thaliana] >gi75334011|sp|Q9FL40.1|C3H53_ARATH RecName: Full=Zinc ... |
| Match: gi|66536941|ref|XP_395009.2| |
score: 180 |
e-value: 7e-44 |
Identity: 58.33% |
Span: 423bp (52.1%) |
Frame: -3 |
| gi|66536941|ref|XP_395009.2| PREDICTED: similar to Hypothetical protein MGC76229 [Apis mellifera] |
| Match: gi|91088695|ref|XP_975014.1| |
score: 178 |
e-value: 3e-43 |
Identity: 62.12% |
Span: 390bp (48.0%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|72163574|ref|XP_793105.1| |
score: 175 |
e-value: 3e-42 |
Identity: 57.55% |
Span: 408bp (50.2%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|55625210|ref|XP_527076.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|4096748|gb|AAC99998.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| gi|4096748|gb|AAC99998.1| ORF; Method: conceptual translation supplied by author. [Homo sapiens] |
| Match: gi|61371511|gb|AAX43680.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| RNA |
| Match: gi|51480449|gb|AAH80205.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| RNA |
| Match: gi|12858161|dbj|BAB31220.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| gi|12858161|dbj|BAB31220.1| unnamed protein product [Mus musculus] |
| Match: gi|109079369|ref|XP_001108809.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|53127796|emb|CAG31227.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| hypothetical |
| Match: gi|78174395|gb|AAI07552.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| RNA |
| Match: gi|55728671|emb|CAH91075.1| |
score: 174 |
e-value: 6e-42 |
Identity: 57.97% |
Span: 405bp (49.9%) |
Frame: -3 |
| hypothetical |
| Match: gi|66910908|gb|AAH97991.1| |
score: 173 |
e-value: 8e-42 |
Identity: 57.25% |
Span: 405bp (49.9%) |
Frame: -3 |
| RNA |
| Match: gi|54639378|gb|EAL28780.1| |
score: 172 |
e-value: 2e-41 |
Identity: 56.52% |
Span: 408bp (50.2%) |
Frame: -3 |
| GA13140-PA |
| Match: gi|38566013|gb|AAH62518.1| |
score: 172 |
e-value: 2e-41 |
Identity: 58.33% |
Span: 390bp (48.0%) |
Frame: -3 |
| RNA |
| Match: gi|74195542|dbj|BAE39585.1| |
score: 171 |
e-value: 5e-41 |
Identity: 57.25% |
Span: 405bp (49.9%) |
Frame: -3 |
| unnamed |
| Match: gi|28280011|gb|AAH45067.1| |
score: 171 |
e-value: 3e-41 |
Identity: 55.8% |
Span: 408bp (50.2%) |
Frame: -3 |
| gi|28280011|gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis] |
| Match: gi|47086019|ref|NP_998379.1| |
score: 170 |
e-value: 7e-41 |
Identity: 56.82% |
Span: 390bp (48.0%) |
Frame: -3 |
| gi|47086019|ref|NP_998379.1| zgc:77910 [Danio rerio] >gi|41388933|gb|AAH65892.1| Zgc:77910 [Danio rerio] |
| Match: gi|28573264|ref|NP_649440.3| |
score: 170 |
e-value: 9e-41 |
Identity: 57.89% |
Span: 393bp (48.4%) |
Frame: -3 |
| gi|28573264|ref|NP_649440.3| CG14641-PA [Drosophila melanogaster] gi|16769690|gb|AAL29064.1| LD46870p [Drosophila mel... |
| Match: gi|57109372|ref|XP_545027.1| |
score: 169 |
e-value: 2e-40 |
Identity: 55.8% |
Span: 405bp (49.9%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|108872461|gb|EAT36686.1| |
score: 169 |
e-value: 2e-40 |
Identity: 55.4% |
Span: 408bp (50.2%) |
Frame: -3 |
| RNA |
| Match: gi|55240887|gb|EAA09240.2| |
score: 168 |
e-value: 3e-40 |
Identity: 55.4% |
Span: 408bp (50.2%) |
Frame: -3 |
| ENSANGP00000012203 |
| Match: gi|92081514|dbj|BAE93304.1| |
score: 164 |
e-value: 4e-39 |
Identity: 52.38% |
Span: 423bp (52.1%) |
Frame: -3 |
| zinc |
| Match: gi|76163139|gb|AAX30926.2| |
score: 160 |
e-value: 9e-38 |
Identity: 52.63% |
Span: 393bp (48.4%) |
Frame: -3 |
| gi|76163139|gb|AAX30926.2| SJCHGC08802 protein [Schistosoma japonicum] |
| Match: gi|30145708|emb|CAA93419.2| |
score: 158 |
e-value: 3e-37 |
Identity: 50.36% |
Span: 393bp (48.4%) |
Frame: -3 |
| gi|30145708|emb|CAA93419.2| Hypothetical protein T11G6.8 [Caenorhabditis elegans] |
| Match: gi|39594967|emb|CAE70835.1| |
score: 157 |
e-value: 6e-37 |
Identity: 49.64% |
Span: 393bp (48.4%) |
Frame: -3 |
| gi|39594967|emb|CAE70835.1| Hypothetical protein CBG17615 [Caenorhabditis briggsae] |
| Match: gi|89305001|gb|EAS02989.1| |
score: 127 |
e-value: 7e-28 |
Identity: 43.7% |
Span: 387bp (47.7%) |
Frame: -3 |
| hypothetical |
| Match: gi|57223055|gb|AAW41099.1| |
score: 119 |
e-value: 1e-25 |
Identity: 44.53% |
Span: 384bp (47.3%) |
Frame: -3 |
| cell |
| Match: gi|23509154|ref|NP_701822.1| |
score: 93.6 |
e-value: 1e-17 |
Identity: 38.06% |
Span: 396bp (48.8%) |
Frame: -3 |
| gi|23509154|ref|NP_701822.1| hypothetical protein, conserved [Plasmodium falciparum 3D7] gi|23496995|gb|AAN36546.1| h... |
| Match: gi|81177562|ref|XP_723726.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 34.56% |
Span: 405bp (49.9%) |
Frame: -3 |
| hypothetical |
| Match: gi|68066426|ref|XP_675196.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 35.04% |
Span: 405bp (49.9%) |
Frame: -3 |
| RNA-binding |
| Match: gi|70944020|ref|XP_741987.1| |
score: 85.9 |
e-value: 2e-15 |
Identity: 34.56% |
Span: 405bp (49.9%) |
Frame: -3 |
| hypothetical |
| Match: gi|15237649|ref|NP_196041.1| |
score: 84.3 |
e-value: 6e-15 |
Identity: 40.87% |
Span: 330bp (40.6%) |
Frame: -3 |
| gi|15237649|ref|NP_196041.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|9955576|emb|CAC... |
| Match: gi|71031616|ref|XP_765450.1| |
score: 81.3 |
e-value: 5e-14 |
Identity: 43.68% |
Span: 255bp (31.4%) |
Frame: -3 |
| hypothetical |
| Match: gi|65301991|emb|CAI74098.1| |
score: 78.2 |
e-value: 5e-13 |
Identity: 50.68% |
Span: 213bp (26.2%) |
Frame: -3 |
| hypothetical |
| Match: gi|66803570|ref|XP_635624.1| |
score: 73.6 |
e-value: 1e-11 |
Identity: 32.5% |
Span: 357bp (44.0%) |
Frame: -3 |
| hypothetical |
| Match: gi|83771820|dbj|BAE61950.1| |
score: 60.1 |
e-value: 1e-07 |
Identity: 32.79% |
Span: 351bp (43.2%) |
Frame: -3 |
| unnamed |
| Match: gi|71004296|ref|XP_756814.1| |
score: 59.7 |
e-value: 2e-07 |
Identity: 27.89% |
Span: 384bp (47.3%) |
Frame: -3 |
| hypothetical |
| Match: gi|55639681|ref|XP_522650.1| |
score: 58.5 |
e-value: 4e-07 |
Identity: 33.33% |
Span: 276bp (34.0%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|70998470|ref|XP_753957.1| |
score: 58.2 |
e-value: 5e-07 |
Identity: 31.62% |
Span: 336bp (41.4%) |
Frame: -3 |
| cell |
| Match: gi|39947951|ref|XP_363057.1| |
score: 58.2 |
e-value: 5e-07 |
Identity: 30.77% |
Span: 336bp (41.4%) |
Frame: -3 |
| hypothetical |
| Match: gi|111062062|gb|EAT83182.1| |
score: 58.2 |
e-value: 5e-07 |
Identity: 30.4% |
Span: 351bp (43.2%) |
Frame: -3 |
| hypothetical |
| Match: gi|109128372|ref|XP_001105599.1| |
score: 57.8 |
e-value: 6e-07 |
Identity: 43.75% |
Span: 183bp (22.5%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|50305857|ref|XP_452889.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 25.18% |
Span: 363bp (44.7%) |
Frame: -3 |
| unnamed |
| Match: gi|41079037|gb|AAR99468.1| |
score: 56.2 |
e-value: 2e-06 |
Identity: 28.68% |
Span: 363bp (44.7%) |
Frame: -3 |
| gi|41079037|gb|AAR99468.1| RNA binding protein [Leptosphaeria maculans] |
| Match: gi|67523579|ref|XP_659849.1| |
score: 55.1 |
e-value: 4e-06 |
Identity: 30.77% |
Span: 336bp (41.4%) |
Frame: -3 |
| hypothetical |
| Match: gi|67463470|ref|XP_648392.1| |
score: 54.7 |
e-value: 5e-06 |
Identity: 28.23% |
Span: 360bp (44.3%) |
Frame: -3 |
| cell |
| Match: gi|18376284|emb|CAD21397.1| |
score: 53.5 |
e-value: 1e-05 |
Identity: 28.95% |
Span: 327bp (40.3%) |
Frame: -3 |
| conserved |
| Match: gi|68484473|ref|XP_713847.1| |
score: 53.1 |
e-value: 2e-05 |
Identity: 31.01% |
Span: 348bp (42.9%) |
Frame: -3 |
| hypothetical |
| Match: gi|83317567|ref|XP_731216.1| |
score: 53.1 |
e-value: 2e-05 |
Identity: 26.45% |
Span: 342bp (42.1%) |
Frame: -3 |
| cell |
| Match: gi|90300879|gb|EAS30510.1| |
score: 52.8 |
e-value: 2e-05 |
Identity: 30.7% |
Span: 327bp (40.3%) |
Frame: -3 |
| hypothetical |
| Match: gi|14422269|emb|CAC41387.1| |
score: 51.6 |
e-value: 5e-05 |
Identity: 26.28% |
Span: 387bp (47.7%) |
Frame: -3 |
| cwf2 |
| Match: gi|49656492|emb|CAG89166.1| |
score: 51.6 |
e-value: 5e-05 |
Identity: 28.79% |
Span: 375bp (46.2%) |
Frame: -3 |
| unnamed |
| Match: gi|88179003|gb|EAQ86471.1| |
score: 51.6 |
e-value: 5e-05 |
Identity: 27.5% |
Span: 345bp (42.5%) |
Frame: -3 |
| hypothetical |
| Match: gi|61402551|gb|AAH91819.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 31.43% |
Span: 402bp (49.5%) |
Frame: -3 |
| LOC553339 |
| Match: gi|68072605|ref|XP_678216.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 25.62% |
Span: 342bp (42.1%) |
Frame: -3 |
| hypothetical |
| Match: gi|68444261|ref|XP_691172.1| |
score: 51.2 |
e-value: 6e-05 |
Identity: 31.43% |
Span: 402bp (49.5%) |
Frame: -3 |
| PREDICTED: |
| Match: gi|50909649|ref|XP_466313.1| |
score: 50.8 |
e-value: 8e-05 |
Identity: 37.93% |
Span: 174bp (21.4%) |
Frame: -3 |
| gi|50909649|ref|XP_466313.1| putative nucleic acid binding protein [Oryza sativa (japonica cultivar-group)] >gi|46806... |
| Match: gi|9663769|emb|CAC01238.1| |
score: 50.1 |
e-value: 0.0001 |
Identity: 39.62% |
Span: 159bp (19.6%) |
Frame: -3 |
| RNA Binding Protein 47 [Nicotiana plumbaginifolia] |
| Match: gi|15220233|ref|NP_175180.1| |
score: 50.1 |
e-value: 0.0001 |
Identity: 38.71% |
Span: 177bp (21.8%) |
Frame: -3 |
| ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding [Arabidopsis thaliana] >gi5668812|gb|AAD46038.1|... |
|
| 179 lower scoring hits censored -- only 69 best hits are stored. |
