All Stored BLAST annotations for SGN-U340878
arabidopsis/peptide [blastx] Showing best 2 hits recorded
Match: At1G17760.1 score: 225 e-value: 3e-59 Identity: 62.09% Span: 543bp (97.5%) Frame: 2
Symbols: CSTF77, ATCSTF77 | ATCSTF77/CSTF77 (Cleavage stimulation factor 77); binding | chr1:6110201-6116264 REVERSE
Match: At1G04080.1 score: 50.8 e-value: 1e-06 Identity: 30% Span: 294bp (52.8%) Frame: 2
hydroxyproline-rich glycoprotein family protein | chr1:1051802-1056549 FORWARD

3 lower scoring hits censored -- only 2 best hits are stored.
genbank/nr [blastx] Showing best 65 hits recorded
Match: gi|92875936|gb|ABE83717.1| score: 236 e-value: 8e-61 Identity: 66.48% Span: 543bp (97.5%) Frame: 2
Protein
Match: gi|22329636|ref|NP_173218.2| score: 225 e-value: 2e-57 Identity: 62.09% Span: 543bp (97.5%) Frame: 2
CSTF77; protein binding [Arabidopsis thaliana] >gi26983802|gb|AAN86153.1| unknown protein [Arabidopsis thaliana]
Match: gi|21591637|gb|AAM64166.1| score: 225 e-value: 2e-57 Identity: 62.09% Span: 543bp (97.5%) Frame: 2
gi|21591637|gb|AAM64166.1| cleavage stimulation factor 77 [Arabidopsis thaliana]
Match: gi|77556873|gb|ABA99669.1| score: 224 e-value: 3e-57 Identity: 64.61% Span: 531bp (95.3%) Frame: 2
gi|77556873|gb|ABA99669.1| Suppressor of forked protein [Oryza sativa (japonica cultivar-group)]
Match: gi|9802749|gb|AAF99818.1| score: 201 e-value: 3e-50 Identity: 60.48% Span: 486bp (87.3%) Frame: 2
gi|9802749|gb|AAF99818.1| Similar to cleavage stimulation factor subunit [Arabidopsis thaliana]
Match: gi|50416209|gb|AAH77522.1| score: 116 e-value: 1e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
Cstf3-prov
Match: gi|4557495|ref|NP_001317.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
gi|4557495|ref|NP_001317.1| cleavage stimulation factor subunit 3 [Homo sapiens] gi|1082704|pir||S50852 cleavage stim...
Match: gi|74192721|dbj|BAE34879.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
unnamed
Match: gi|76672617|ref|XP_869420.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
PREDICTED:
Match: gi|55635695|ref|XP_508355.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
PREDICTED:
Match: gi|13096880|gb|AAH03241.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
Cleavage
Match: gi|773663|gb|AAB01508.1| score: 116 e-value: 2e-24 Identity: 36.54% Span: 468bp (84.0%) Frame: 2
gi|773663|gb|AAB01508.1| similar to C. elegans cleavage stimulation factor encoded by GenBank Accession Number L39893...
Match: gi|38649389|gb|AAH63376.1| score: 116 e-value: 1e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
Cleavage
Match: gi|675505|gb|AAA62311.1| score: 116 e-value: 2e-24 Identity: 36.54% Span: 468bp (84.0%) Frame: 2
cleavage
Match: gi|46403221|gb|AAS92630.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
cleavage
Match: gi|73476127|emb|CAJ21197.1| score: 116 e-value: 1e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
cleavage
Match: gi|3876355|emb|CAA92672.1| score: 116 e-value: 2e-24 Identity: 36.54% Span: 468bp (84.0%) Frame: 2
Hypothetical
Match: gi|60098407|emb|CAH65034.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
hypothetical
Match: gi|67969964|dbj|BAE01329.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
unnamed
Match: gi|73982208|ref|XP_533159.2| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
PREDICTED:
Match: gi|15131402|emb|CAC48252.1| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
gi|15131402|emb|CAC48252.1| dJ85M6.1 (cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kD) [Homo sapiens]
Match: gi|76672615|ref|XP_585277.2| score: 116 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
PREDICTED:
Match: gi|28277806|gb|AAH45871.1| score: 115 e-value: 2e-24 Identity: 36.55% Span: 435bp (78.1%) Frame: 2
gi|28277806|gb|AAH45871.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa [Danio rerio]
Match: gi|66521630|ref|XP_393870.2| score: 114 e-value: 8e-24 Identity: 35.86% Span: 435bp (78.1%) Frame: 2
PREDICTED: similar to Protein suppressor of forked [Apis mellifera]
Match: gi|55726542|emb|CAH90038.1| score: 114 e-value: 6e-24 Identity: 35.86% Span: 435bp (78.1%) Frame: 2
hypothetical
Match: gi|47218738|emb|CAG05710.1| score: 114 e-value: 5e-24 Identity: 35.86% Span: 435bp (78.1%) Frame: 2
gi|47218738|emb|CAG05710.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|66807743|ref|XP_637594.1| score: 112 e-value: 3e-23 Identity: 36.81% Span: 540bp (96.9%) Frame: 2
cleavage stimulation factor subunit 3 [Dictyostelium discoideum AX4] >gi60466011|gb|EAL64078.1| cleavage stimulation ...
Match: gi|72041506|ref|XP_796577.1| score: 110 e-value: 9e-23 Identity: 34.44% Span: 450bp (80.8%) Frame: 2
PREDICTED:
Match: gi|76157511|gb|AAX28411.2| score: 105 e-value: 4e-21 Identity: 29.38% Span: 477bp (85.6%) Frame: 2
SJCHGC08258
Match: gi|55241725|gb|EAL40782.1| score: 104 e-value: 6e-21 Identity: 33.55% Span: 450bp (80.8%) Frame: 2
ENSANGP00000029672
Match: gi|37719566|gb|AAR01873.1| score: 104 e-value: 5e-21 Identity: 34.01% Span: 438bp (78.6%) Frame: 2
gi|37719566|gb|AAR01873.1| suppressor of forked [Drosophila subobscura]
Match: gi|91085233|ref|XP_972887.1| score: 104 e-value: 6e-21 Identity: 33.79% Span: 435bp (78.1%) Frame: 2
PREDICTED:
Match: gi|39587101|emb|CAE57568.1| score: 103 e-value: 1e-20 Identity: 31.52% Span: 543bp (97.5%) Frame: 2
gi|39587101|emb|CAE57568.1| Hypothetical protein CBG00546 [Caenorhabditis briggsae]
Match: gi|8671|emb|CAA44552.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
39
Match: gi|62862188|ref|NP_001015241.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
CG17170-PA.3
Match: gi|20976836|gb|AAM27493.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
gi|20976836|gb|AAM27493.1| GH16848p [Drosophila melanogaster]
Match: gi|60678051|gb|AAX33532.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
LD38348p
Match: gi|62862190|ref|NP_001015242.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
CG17170-PC.3
Match: gi|62862186|ref|NP_001015240.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
CG17170-PB.3
Match: gi|4092534|gb|AAC99436.1| score: 102 e-value: 2e-20 Identity: 32.65% Span: 438bp (78.6%) Frame: 2
gi|4092534|gb|AAC99436.1| suppressor of forked protein; Su(f) protein [Drosophila virilis]
Match: gi|108878547|gb|EAT42772.1| score: 100 e-value: 7e-20 Identity: 30.46% Span: 519bp (93.2%) Frame: 2
cleavage
Match: gi|109468513|ref|XP_342478.3| score: 100 e-value: 7e-20 Identity: 33.1% Span: 435bp (78.1%) Frame: 2
PREDICTED:
Match: gi|2330863|emb|CAB11100.1| score: 96.7 e-value: 1e-18 Identity: 31.17% Span: 459bp (82.4%) Frame: 2
SPAC6F12.17
Match: gi|85090792|ref|XP_958587.1| score: 87.4 e-value: 8e-16 Identity: 29.25% Span: 426bp (76.5%) Frame: 2
hypothetical
Match: gi|50551041|ref|XP_502994.1| score: 82 e-value: 3e-14 Identity: 29.38% Span: 462bp (82.9%) Frame: 2
hypothetical
Match: gi|46092349|dbj|BAD14261.1| score: 79.3 e-value: 2e-13 Identity: 33.94% Span: 324bp (58.2%) Frame: 2
suppressor
Match: gi|46105442|ref|XP_380525.1| score: 75.5 e-value: 3e-12 Identity: 28.46% Span: 360bp (64.6%) Frame: 2
gi|46105442|ref|XP_380525.1| hypothetical protein FG00349.1 [Gibberella zeae PH-1] >gi|42546766|gb|EAA69609.1| hypoth...
Match: gi|88175809|gb|EAQ83277.1| score: 74.7 e-value: 5e-12 Identity: 27.89% Span: 423bp (75.9%) Frame: 2
hypothetical
Match: gi|39942370|ref|XP_360722.1| score: 73.9 e-value: 9e-12 Identity: 27.27% Span: 414bp (74.3%) Frame: 2
hypothetical
Match: gi|90303140|gb|EAS32771.1| score: 72.8 e-value: 2e-11 Identity: 30.89% Span: 360bp (64.6%) Frame: 2
hypothetical
Match: gi|71008336|ref|XP_758202.1| score: 71.2 e-value: 6e-11 Identity: 26.95% Span: 468bp (84.0%) Frame: 2
hypothetical
Match: gi|83767668|dbj|BAE57807.1| score: 69.7 e-value: 2e-10 Identity: 27.03% Span: 426bp (76.5%) Frame: 2
unnamed
Match: gi|67537444|ref|XP_662496.1| score: 65.1 e-value: 4e-09 Identity: 29.03% Span: 360bp (64.6%) Frame: 2
hypothetical
Match: gi|70999600|ref|XP_754517.1| score: 63.2 e-value: 2e-08 Identity: 23.65% Span: 426bp (76.5%) Frame: 2
hypothetical
Match: gi|67968738|dbj|BAE00727.1| score: 59.3 e-value: 2e-07 Identity: 32.93% Span: 246bp (44.2%) Frame: 2
unnamed
Match: gi|49657353|emb|CAG90131.1| score: 58.9 e-value: 3e-07 Identity: 23.68% Span: 450bp (80.8%) Frame: 2
unnamed
Match: gi|111059447|gb|EAT80567.1| score: 57 e-value: 1e-06 Identity: 25.74% Span: 381bp (68.4%) Frame: 2
hypothetical
Match: gi|68466759|ref|XP_722575.1| score: 56.6 e-value: 2e-06 Identity: 24.41% Span: 375bp (67.3%) Frame: 2
hypothetical
Match: gi|68467042|ref|XP_722436.1| score: 56.6 e-value: 2e-06 Identity: 24.41% Span: 375bp (67.3%) Frame: 2
hypothetical
Match: gi|66521626|ref|XP_623305.1| score: 55.1 e-value: 4e-06 Identity: 39.66% Span: 174bp (31.2%) Frame: 2
PREDICTED:
Match: gi|6323706|ref|NP_013777.1| score: 52 e-value: 4e-05 Identity: 25.56% Span: 375bp (67.3%) Frame: 2
gi|6323706|ref|NP_013777.1| Protein with a role in mRNA stability and/or poly(A) tail length; Rna14p [Saccharomyces c...
Match: gi|3142300|gb|AAC16751.1| score: 50.8 e-value: 8e-05 Identity: 30% Span: 294bp (52.8%) Frame: 2
Contains similarity to pre-mRNA processing protein PRP39 gbL29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, ...
Match: gi|18379230|ref|NP_563700.1| score: 50.8 e-value: 8e-05 Identity: 30% Span: 294bp (52.8%) Frame: 2
PRP39; binding [Arabidopsis thaliana] >gi15810565|gb|AAL07170.1| unknown protein [Arabidopsis thaliana] >gi|20259567|...
Match: gi|49525556|emb|CAG59173.1| score: 50.8 e-value: 8e-05 Identity: 21.37% Span: 375bp (67.3%) Frame: 2
unnamed
Match: gi|85090792|ref|XP_958587.1| score: 20.4 e-value: 8e-16 Identity: 42.86% Span: 63bp (11.3%) Frame: 3
hypothetical

37 lower scoring hits censored -- only 65 best hits are stored.