| genbank/nr [blastx] | Showing best 77 hits recorded |
| Match: gi|157341615|emb|CAO62170.1| |
score: 304 |
e-value: 1e-80 |
Identity: 66.3% |
Span: 807bp (64.8%) |
Frame: 3 |
| unnamed |
| Match: gi|118485672|gb|ABK94686.1| |
score: 280 |
e-value: 2e-73 |
Identity: 60.07% |
Span: 813bp (65.2%) |
Frame: 3 |
| unknown [Populus trichocarpa] |
| Match: gi|217072264|gb|ACJ84492.1| |
score: 278 |
e-value: 9e-73 |
Identity: 61.54% |
Span: 849bp (68.1%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|18414951|ref|NP_567536.1| |
score: 277 |
e-value: 2e-72 |
Identity: 58.36% |
Span: 840bp (67.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21593540|gb|AAM65507.1| putative splicing re... |
| Match: gi|157341907|emb|CAO63363.1| |
score: 275 |
e-value: 5e-72 |
Identity: 59.7% |
Span: 792bp (63.6%) |
Frame: 3 |
| unnamed |
| Match: gi|89274206|gb|ABD65610.1| |
score: 269 |
e-value: 3e-70 |
Identity: 59.42% |
Span: 819bp (65.7%) |
Frame: 3 |
| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] |
| Match: gi|2245131|emb|CAB10552.1| |
score: 266 |
e-value: 2e-69 |
Identity: 56.86% |
Span: 828bp (66.5%) |
Frame: 3 |
| hypothetical protein [Arabidopsis thaliana] >gi7268525|emb|CAB78775.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|125553779|gb|EAY99384.1| |
score: 263 |
e-value: 2e-68 |
Identity: 66.12% |
Span: 720bp (57.8%) |
Frame: 3 |
| hypothetical protein OsI_21352 [Oryza sativa Indica Group] >gi125595806|gb|EAZ35586.1| hypothetical protein OsJ_19872... |
| Match: gi|89257671|gb|ABD65158.1| |
score: 263 |
e-value: 2e-68 |
Identity: 60% |
Span: 813bp (65.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Brassica oleracea] |
| Match: gi|55295911|dbj|BAD67779.1| |
score: 263 |
e-value: 2e-68 |
Identity: 66.39% |
Span: 717bp (57.5%) |
Frame: 3 |
| putative RNA recognition motif (RRM)-containing protein [Oryza sativa Japonica Group] >gi215692537|dbj|BAG87957.1| un... |
| Match: gi|115465990|ref|NP_001056594.1| |
score: 263 |
e-value: 2e-68 |
Identity: 66.39% |
Span: 717bp (57.5%) |
Frame: 3 |
| Os06g0112400 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|212721270|ref|NP_001131898.1| |
score: 261 |
e-value: 7e-68 |
Identity: 65.69% |
Span: 717bp (57.5%) |
Frame: 3 |
| hypothetical protein LOC100193283 [Zea mays] >gi194692854|gb|ACF80511.1| unknown [Zea mays] >gi|195638370|gb|ACG38653... |
| Match: gi|30695063|ref|NP_199498.2| |
score: 261 |
e-value: 1e-67 |
Identity: 62.75% |
Span: 720bp (57.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi38564314|gb|AAR23736.1| At5g46870 [Arabidops... |
| Match: gi|8809670|dbj|BAA97221.1| |
score: 258 |
e-value: 1e-66 |
Identity: 62.96% |
Span: 708bp (56.8%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|145334499|ref|NP_001078595.1| |
score: 258 |
e-value: 8e-67 |
Identity: 64.29% |
Span: 714bp (57.3%) |
Frame: 3 |
| RNA |
| Match: gi|195634665|gb|ACG36801.1| |
score: 258 |
e-value: 8e-67 |
Identity: 65.15% |
Span: 714bp (57.3%) |
Frame: 3 |
| nucleic |
| Match: gi|145334501|ref|NP_001078596.1| |
score: 256 |
e-value: 2e-66 |
Identity: 63.33% |
Span: 720bp (57.8%) |
Frame: 3 |
| RNA |
| Match: gi|21592997|gb|AAM64946.1| |
score: 254 |
e-value: 1e-65 |
Identity: 63.45% |
Span: 714bp (57.3%) |
Frame: 3 |
| gi|21592997|gb|AAM64946.1| unknown [Arabidopsis thaliana] |
| Match: gi|15237419|ref|NP_197186.1| |
score: 254 |
e-value: 1e-65 |
Identity: 63.45% |
Span: 714bp (57.3%) |
Frame: 3 |
| gi|15237419|ref|NP_197186.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|11357808|pir||T... |
| Match: gi|16648740|gb|AAL25562.1| |
score: 252 |
e-value: 4e-65 |
Identity: 63.03% |
Span: 714bp (57.3%) |
Frame: 3 |
| gi|16648740|gb|AAL25562.1| AT5g16840/F5E19_180 [Arabidopsis thaliana] gi|20334916|gb|AAM16214.1| AT5g16840/F5E19_180 ... |
| Match: gi|195625094|gb|ACG34377.1| |
score: 247 |
e-value: 2e-63 |
Identity: 59.76% |
Span: 750bp (60.2%) |
Frame: 3 |
| nucleic |
| Match: gi|157339038|emb|CAO42389.1| |
score: 244 |
e-value: 1e-62 |
Identity: 58.5% |
Span: 753bp (60.4%) |
Frame: 3 |
| unnamed |
| Match: gi|115460254|ref|NP_001053727.1| |
score: 244 |
e-value: 1e-62 |
Identity: 53.87% |
Span: 813bp (65.2%) |
Frame: 3 |
| Os04g0594400 [Oryza sativa (japonica cultivar-group)] >gi32489377|emb|CAE04149.1| OSJNBa0009P12.34 [Oryza sativa (jap... |
| Match: gi|115454945|ref|NP_001051073.1| |
score: 234 |
e-value: 9e-60 |
Identity: 58.2% |
Span: 726bp (58.3%) |
Frame: 3 |
| Os03g0713600 [Oryza sativa (japonica cultivar-group)] >gi18071362|gb|AAL58221.1|AC090882_24 putative splicing regulat... |
| Match: gi|125545498|gb|EAY91637.1| |
score: 233 |
e-value: 3e-59 |
Identity: 57.55% |
Span: 729bp (58.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|115460668|ref|NP_001053934.1| |
score: 231 |
e-value: 1e-58 |
Identity: 49.68% |
Span: 912bp (73.2%) |
Frame: 3 |
| Os04g0624800 |
| Match: gi|116309761|emb|CAH66804.1| |
score: 230 |
e-value: 2e-58 |
Identity: 49.35% |
Span: 912bp (73.2%) |
Frame: 3 |
| H0215F08.15 |
| Match: gi|194693552|gb|ACF80860.1| |
score: 226 |
e-value: 3e-57 |
Identity: 57.38% |
Span: 726bp (58.3%) |
Frame: 3 |
| unknown |
| Match: gi|195624750|gb|ACG34205.1| |
score: 225 |
e-value: 7e-57 |
Identity: 57.79% |
Span: 726bp (58.3%) |
Frame: 3 |
| RNA |
| Match: gi|147798380|emb|CAN70144.1| |
score: 213 |
e-value: 3e-53 |
Identity: 47.23% |
Span: 720bp (57.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|30697598|ref|NP_849859.1| |
score: 198 |
e-value: 9e-49 |
Identity: 51.56% |
Span: 675bp (54.2%) |
Frame: 3 |
| gi|30697598|ref|NP_849859.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|18408904|ref|NP_564915.1| |
score: 196 |
e-value: 3e-48 |
Identity: 51.11% |
Span: 675bp (54.2%) |
Frame: 3 |
| gi|18408904|ref|NP_564915.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|21593120|gb|AAM... |
| Match: gi|26450623|dbj|BAC42423.1| |
score: 196 |
e-value: 3e-48 |
Identity: 51.11% |
Span: 675bp (54.2%) |
Frame: 3 |
| gi|26450623|dbj|BAC42423.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|30697595|ref|NP_849858.1| |
score: 196 |
e-value: 3e-48 |
Identity: 51.11% |
Span: 675bp (54.2%) |
Frame: 3 |
| gi|30697595|ref|NP_849858.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|147846536|emb|CAN83758.1| |
score: 190 |
e-value: 3e-46 |
Identity: 55.71% |
Span: 618bp (49.6%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|168017899|ref|XP_001761484.1| |
score: 190 |
e-value: 2e-46 |
Identity: 49.35% |
Span: 693bp (55.6%) |
Frame: 3 |
| predicted |
| Match: gi|108710742|gb|ABF98537.1| |
score: 189 |
e-value: 6e-46 |
Identity: 57.14% |
Span: 624bp (50.1%) |
Frame: 3 |
| RRM-containing |
| Match: gi|168001561|ref|XP_001753483.1| |
score: 189 |
e-value: 4e-46 |
Identity: 47.26% |
Span: 693bp (55.6%) |
Frame: 3 |
| predicted |
| Match: gi|125591697|gb|EAZ32047.1| |
score: 189 |
e-value: 3e-46 |
Identity: 47.37% |
Span: 843bp (67.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|168043598|ref|XP_001774271.1| |
score: 187 |
e-value: 2e-45 |
Identity: 45.31% |
Span: 705bp (56.6%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162674398|gb|EDQ60907.1| predicted protein [Physcomitrella... |
| Match: gi|157349947|emb|CAO39846.1| |
score: 187 |
e-value: 2e-45 |
Identity: 46.43% |
Span: 705bp (56.6%) |
Frame: 3 |
| unnamed |
| Match: gi|125534713|gb|EAY81261.1| |
score: 184 |
e-value: 2e-44 |
Identity: 47.28% |
Span: 711bp (57.1%) |
Frame: 3 |
| hypothetical |
| Match: gi|18421342|ref|NP_568522.1| |
score: 183 |
e-value: 3e-44 |
Identity: 46.37% |
Span: 702bp (56.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21593919|gb|AAM65884.1| unknown [Arabidopsis... |
| Match: gi|168031266|ref|XP_001768142.1| |
score: 183 |
e-value: 3e-44 |
Identity: 45.87% |
Span: 705bp (56.6%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162680580|gb|EDQ67015.1| predicted protein [Physcomitrella... |
| Match: gi|168005195|ref|XP_001755296.1| |
score: 180 |
e-value: 2e-43 |
Identity: 42.01% |
Span: 705bp (56.6%) |
Frame: 3 |
| predicted |
| Match: gi|195616746|gb|ACG30203.1| |
score: 176 |
e-value: 4e-42 |
Identity: 40.6% |
Span: 744bp (59.7%) |
Frame: 3 |
| RNA-binding |
| Match: gi|87162638|gb|ABD28433.1| |
score: 175 |
e-value: 7e-42 |
Identity: 43.55% |
Span: 705bp (56.6%) |
Frame: 3 |
| RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] |
| Match: gi|115455345|ref|NP_001051273.1| |
score: 174 |
e-value: 1e-41 |
Identity: 40.52% |
Span: 744bp (59.7%) |
Frame: 3 |
| Os03g0748900 [Oryza sativa (japonica cultivar-group)] >gi18087665|gb|AAL58957.1|AC091811_6 putative arginine-rich pro... |
| Match: gi|125587924|gb|EAZ28588.1| |
score: 173 |
e-value: 2e-41 |
Identity: 41.57% |
Span: 702bp (56.3%) |
Frame: 3 |
| hypothetical |
| Match: gi|89257670|gb|ABD65157.1| |
score: 169 |
e-value: 5e-40 |
Identity: 44.88% |
Span: 744bp (59.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|195646750|gb|ACG42843.1| |
score: 168 |
e-value: 8e-40 |
Identity: 41.6% |
Span: 738bp (59.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|46200527|gb|AAS82601.1| |
score: 167 |
e-value: 2e-39 |
Identity: 57.51% |
Span: 576bp (46.2%) |
Frame: 3 |
| gi|46200527|gb|AAS82601.1| putative aldose reductase-related protein [Zea mays] |
| Match: gi|148908395|gb|ABR17311.1| |
score: 159 |
e-value: 4e-37 |
Identity: 42.39% |
Span: 693bp (55.6%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|12324073|gb|AAG52001.1|AC012563_11 |
score: 154 |
e-value: 2e-35 |
Identity: 49.22% |
Span: 579bp (46.5%) |
Frame: 3 |
| unknown |
| Match: gi|157355062|emb|CAO48423.1| |
score: 153 |
e-value: 3e-35 |
Identity: 41.56% |
Span: 690bp (55.4%) |
Frame: 3 |
| unnamed |
| Match: gi|30697600|ref|NP_849860.1| |
score: 152 |
e-value: 6e-35 |
Identity: 48.7% |
Span: 579bp (46.5%) |
Frame: 3 |
| gi|30697600|ref|NP_849860.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|77551367|gb|ABA94164.1| |
score: 148 |
e-value: 9e-34 |
Identity: 50.94% |
Span: 477bp (38.3%) |
Frame: 3 |
| gi|77551367|gb|ABA94164.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa (japonica ... |
| Match: gi|217072820|gb|ACJ84770.1| |
score: 142 |
e-value: 8e-32 |
Identity: 42.99% |
Span: 603bp (48.4%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|217073640|gb|ACJ85180.1| |
score: 139 |
e-value: 5e-31 |
Identity: 36.67% |
Span: 678bp (54.4%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|48209876|gb|AAT40482.1| |
score: 138 |
e-value: 9e-31 |
Identity: 35.29% |
Span: 681bp (54.7%) |
Frame: 3 |
| hypothetical protein [Solanum demissum] |
| Match: gi|21618045|gb|AAM67095.1| |
score: 134 |
e-value: 2e-29 |
Identity: 38.14% |
Span: 678bp (54.4%) |
Frame: 3 |
| unknown [Arabidopsis thaliana] |
| Match: gi|18394102|ref|NP_563946.1| |
score: 134 |
e-value: 1e-29 |
Identity: 38.14% |
Span: 678bp (54.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi15292971|gb|AAK93596.1| unknown protein [Ara... |
| Match: gi|7262676|gb|AAF43934.1|AC012188_11 |
score: 132 |
e-value: 6e-29 |
Identity: 37.55% |
Span: 681bp (54.7%) |
Frame: 3 |
| Contains similarity to Vip1 protein from Schizosaccharomyces pombe gbY13635.1 and contains a RNA recognition motif PF... |
| Match: gi|90399103|emb|CAC09457.2| |
score: 125 |
e-value: 6e-27 |
Identity: 35.63% |
Span: 672bp (53.9%) |
Frame: 3 |
| H0423H10.3 [Oryza sativa (indica cultivar-group)] >gi222629654|gb|EEE61786.1| hypothetical protein OsJ_16368 [Oryza s... |
| Match: gi|115460888|ref|NP_001054044.1| |
score: 125 |
e-value: 6e-27 |
Identity: 35.63% |
Span: 672bp (53.9%) |
Frame: 3 |
| Os04g0641400 [Oryza sativa (japonica cultivar-group)] >gi38344906|emb|CAD41850.2| OSJNBb0079B02.9 [Oryza sativa (japo... |
| Match: gi|125549934|gb|EAY95756.1| |
score: 124 |
e-value: 2e-26 |
Identity: 35.22% |
Span: 672bp (53.9%) |
Frame: 3 |
| hypothetical protein OsI_17631 [Oryza sativa Indica Group] |
| Match: gi|113205183|gb|AAT39930.2| |
score: 122 |
e-value: 7e-26 |
Identity: 33.48% |
Span: 681bp (54.7%) |
Frame: 3 |
| RNA recognition motif containing protein, putative [Solanum demissum] |
| Match: gi|147791771|emb|CAN61841.1| |
score: 122 |
e-value: 5e-26 |
Identity: 34.25% |
Span: 681bp (54.7%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|113205169|gb|AAT40524.2| |
score: 121 |
e-value: 1e-25 |
Identity: 33.04% |
Span: 681bp (54.7%) |
Frame: 3 |
| RNA recognition motif containing protein, putative [Solanum demissum] |
| Match: gi|195620868|gb|ACG32264.1| |
score: 119 |
e-value: 7e-25 |
Identity: 36.71% |
Span: 672bp (53.9%) |
Frame: 3 |
| RNA |
| Match: gi|79386568|ref|NP_186770.3| |
score: 118 |
e-value: 9e-25 |
Identity: 34.44% |
Span: 669bp (53.7%) |
Frame: 3 |
| nucleic |
| Match: gi|195634897|gb|ACG36917.1| |
score: 116 |
e-value: 5e-24 |
Identity: 33.2% |
Span: 672bp (53.9%) |
Frame: 3 |
| RNA recognition motif containing protein [Zea mays] >gi224033095|gb|ACN35623.1| unknown [Zea mays] >gi|238014594|gb|A... |
| Match: gi|116791261|gb|ABK25914.1| |
score: 112 |
e-value: 9e-23 |
Identity: 32.63% |
Span: 681bp (54.7%) |
Frame: 3 |
| unknown |
| Match: gi|125577466|gb|EAZ18688.1| |
score: 103 |
e-value: 4e-20 |
Identity: 47.37% |
Span: 342bp (27.4%) |
Frame: 3 |
| hypothetical |
| Match: gi|124359235|gb|ABD32221.2| |
score: 100 |
e-value: 3e-19 |
Identity: 33.05% |
Span: 633bp (50.8%) |
Frame: 3 |
| RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] |
| Match: gi|26452178|dbj|BAC43177.1| |
score: 83.2 |
e-value: 4e-14 |
Identity: 33.16% |
Span: 516bp (41.4%) |
Frame: 3 |
| gi|26452178|dbj|BAC43177.1| unknown protein [Arabidopsis thaliana] >gi|28372926|gb|AAO39945.1| At3g01210 [Arabidopsis... |
| Match: gi|66803042|ref|XP_635364.1| |
score: 75.5 |
e-value: 9e-12 |
Identity: 26.46% |
Span: 780bp (62.6%) |
Frame: 3 |
| gi|66803042|ref|XP_635364.1| hypothetical protein DDB0189279 [Dictyostelium discoideum] >gi|60463679|gb|EAL61861.1| h... |
|
| arabidopsis/peptide [blastx] | Showing best 12 hits recorded |
| Match: At4G17720.1 |
score: 277 |
e-value: 1e-74 |
Identity: 58.36% |
Span: 840bp (67.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr4:9862673-9864511 REVERSE |
| Match: At5G46870.1 |
score: 261 |
e-value: 8e-70 |
Identity: 62.75% |
Span: 720bp (57.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:19032713-19034217 FORWARD |
| Match: At5G16840.2 |
score: 258 |
e-value: 5e-69 |
Identity: 64.29% |
Span: 714bp (57.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:5536045-5538029 FORWARD |
| Match: At5G16840.3 |
score: 256 |
e-value: 2e-68 |
Identity: 63.33% |
Span: 720bp (57.8%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:5536045-5538029 FORWARD |
| Match: At5G16840.1 |
score: 254 |
e-value: 8e-68 |
Identity: 63.45% |
Span: 714bp (57.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:5536045-5538029 FORWARD |
| Match: At1G67950.3 |
score: 198 |
e-value: 7e-51 |
Identity: 51.56% |
Span: 675bp (54.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:25482547-25484083 REVERSE |
| Match: At1G67950.1 |
score: 196 |
e-value: 2e-50 |
Identity: 51.11% |
Span: 675bp (54.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:25482547-25484083 REVERSE |
| Match: At1G67950.2 |
score: 196 |
e-value: 2e-50 |
Identity: 51.11% |
Span: 675bp (54.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:25482547-25483735 REVERSE |
| Match: At5G32450.1 |
score: 183 |
e-value: 2e-46 |
Identity: 46.37% |
Span: 702bp (56.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr5:12096937-12098547 FORWARD |
| Match: At1G67950.4 |
score: 152 |
e-value: 4e-37 |
Identity: 48.7% |
Span: 579bp (46.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:25482547-25483441 REVERSE |
| Match: At1G14340.1 |
score: 134 |
e-value: 9e-32 |
Identity: 38.14% |
Span: 678bp (54.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein | chr1:4897704-4898771 FORWARD |
| Match: At3G01210.1 |
score: 118 |
e-value: 7e-27 |
Identity: 34.44% |
Span: 669bp (53.7%) |
Frame: 3 |
| nucleic acid binding | chr3:72189-73166 FORWARD |
|
| swissprot [blastx] | Showing best 0 hits recorded |
|
