Notice: The contact form functionality has been restored. Apologies for any inconvenience.

All Stored BLAST annotations for SGN-U576891
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157349687|emb|CAO39543.1| score: 389 e-value: 2e-106 Identity: 93.94% Span: 594bp (56.6%) Frame: 2
unnamed
Match: gi|147788664|emb|CAN61008.1| score: 384 e-value: 5e-105 Identity: 91.41% Span: 594bp (56.6%) Frame: 2
hypothetical
Match: gi|195621890|gb|ACG32775.1| score: 380 e-value: 1e-103 Identity: 90.31% Span: 588bp (56.1%) Frame: 2
cleavage
Match: gi|118487488|gb|ABK95571.1| score: 380 e-value: 1e-103 Identity: 92.31% Span: 585bp (55.8%) Frame: 2
unknown
Match: gi|115461402|ref|NP_001054301.1| score: 379 e-value: 2e-103 Identity: 78.84% Span: 687bp (65.5%) Frame: 2
Os04g0683100 [Oryza sativa (japonica cultivar-group)] >gi113565872|dbj|BAF16215.1| Os04g0683100 [Oryza sativa Japonic...
Match: gi|194705542|gb|ACF86855.1| score: 379 e-value: 3e-103 Identity: 90% Span: 594bp (56.6%) Frame: 2
unknown
Match: gi|32488646|emb|CAE03439.1| score: 377 e-value: 9e-103 Identity: 89.5% Span: 594bp (56.6%) Frame: 2
OSJNBa0032F06.22 [Oryza sativa (japonica cultivar-group)]
Match: gi|90399078|emb|CAJ86300.1| score: 377 e-value: 7e-103 Identity: 90.45% Span: 591bp (56.3%) Frame: 2
H0124B04.17 [Oryza sativa (indica cultivar-group)]
Match: gi|125592108|gb|EAZ32458.1| score: 377 e-value: 7e-103 Identity: 90.45% Span: 591bp (56.3%) Frame: 2
hypothetical
Match: gi|195622596|gb|ACG33128.1| score: 376 e-value: 1e-102 Identity: 89.5% Span: 594bp (56.6%) Frame: 2
cleavage and polyadenylation specificity factor 5 [Zea mays]
Match: gi|30686923|ref|NP_194285.2| score: 365 e-value: 3e-99 Identity: 85.86% Span: 594bp (56.6%) Frame: 2
protein binding [Arabidopsis thaliana] >gi26451195|dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] >gi|2897322...
Match: gi|168012875|ref|XP_001759127.1| score: 351 e-value: 5e-95 Identity: 84.92% Span: 597bp (56.9%) Frame: 2
predicted protein [Physcomitrella patens subsp. patens] >gi162689826|gb|EDQ76196.1| predicted protein [Physcomitrella...
Match: gi|116779420|gb|ABK21275.1| score: 346 e-value: 2e-93 Identity: 92.05% Span: 528bp (50.3%) Frame: 2
unknown [Picea sitchensis]
Match: gi|147796474|emb|CAN74801.1| score: 337 e-value: 1e-90 Identity: 80.29% Span: 540bp (51.5%) Frame: 2
hypothetical protein [Vitis vinifera]
Match: gi|2980795|emb|CAA18171.1| score: 309 e-value: 3e-82 Identity: 75.76% Span: 531bp (50.6%) Frame: 2
putative protein [Arabidopsis thaliana]
Match: gi|7269405|emb|CAB81365.1| score: 305 e-value: 4e-81 Identity: 75.9% Span: 522bp (49.8%) Frame: 2
putative protein [Arabidopsis thaliana]
Match: gi|159480710|ref|XP_001698425.1| score: 254 e-value: 1e-65 Identity: 59.9% Span: 576bp (54.9%) Frame: 2
hypothetical protein CHLREDRAFT_77351 [Chlamydomonas reinhardtii] >gi158282165|gb|EDP07918.1| predicted protein [Chla...
Match: gi|148235158|ref|NP_001086401.1| score: 253 e-value: 2e-65 Identity: 55.95% Span: 660bp (62.9%) Frame: 2
cleavage and polyadenylation specificity factor subunit 5 [Xenopus laevis] >gi82183583|sp|Q6DJE4.1|CPSF5_XENLA RecNam...
Match: gi|62859619|ref|NP_001017262.1| score: 252 e-value: 4e-65 Identity: 54.59% Span: 660bp (62.9%) Frame: 2
nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Xenopus (Silurana) tropicalis] >gi89267892|emb|CAJ83328...
Match: gi|197128967|gb|ACH45465.1| score: 251 e-value: 9e-65 Identity: 54.15% Span: 660bp (62.9%) Frame: 2
putative cleavage and polyadenylation specific factor 5 [Taeniopygia guttata] >gi197128968|gb|ACH45466.1| putative cl...
Match: gi|169863260|ref|XP_001838252.1| score: 250 e-value: 1e-64 Identity: 59% Span: 576bp (54.9%) Frame: 2
hypothetical protein CC1G_07993 [Coprinopsis cinerea okayama7#130] >gi116500725|gb|EAU83620.1| hypothetical protein C...
Match: gi|197128970|gb|ACH45468.1| score: 249 e-value: 3e-64 Identity: 53.71% Span: 660bp (62.9%) Frame: 2
putative cleavage and polyadenylation specific factor 5 [Taeniopygia guttata]
Match: gi|5901926|ref|NP_008937.1| score: 248 e-value: 8e-64 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
cleavage and polyadenylation specificity factor subunit 5 [Homo sapiens] >gi78369318|ref|NP_001030408.1| cleavage and...
Match: gi|13386106|ref|NP_080899.1| score: 248 e-value: 6e-64 Identity: 53.71% Span: 660bp (62.9%) Frame: 2
cleavage and polyadenylation specificity factor subunit 5 [Mus musculus] >gi84781636|ref|NP_001034093.1| cleavage and...
Match: gi|41055411|ref|NP_957411.1| score: 248 e-value: 6e-64 Identity: 53.51% Span: 660bp (62.9%) Frame: 2
cleavage and polyadenylation specific factor 5 [Danio rerio] >gi82188244|sp|Q7T3C6.1|CPSF5_DANRE RecName: Full=Cleava...
Match: gi|61371857|gb|AAX43744.1| score: 248 e-value: 8e-64 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
cleavage and polyadenylation specific factor 5 [synthetic construct]
Match: gi|170111950|ref|XP_001887178.1| score: 248 e-value: 5e-64 Identity: 57.71% Span: 576bp (54.9%) Frame: 2
predicted protein [Laccaria bicolor S238N-H82] >gi164637952|gb|EDR02233.1| predicted protein [Laccaria bicolor S238N-...
Match: gi|31873228|emb|CAD97606.1| score: 248 e-value: 8e-64 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
hypothetical protein [Homo sapiens] >gi117644806|emb|CAL37869.1| hypothetical protein [synthetic construct] >gi|11764...
Match: gi|149600698|ref|XP_001520801.1| score: 247 e-value: 1e-63 Identity: 53.71% Span: 684bp (65.2%) Frame: 2
PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-type motif 21, partial [Ornithorhynchus anatinus]
Match: gi|189053429|dbj|BAG35595.1| score: 246 e-value: 2e-63 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
unnamed protein product [Homo sapiens]
Match: gi|74138675|dbj|BAE27154.1| score: 246 e-value: 2e-63 Identity: 53.28% Span: 660bp (62.9%) Frame: 2
unnamed protein product [Mus musculus]
Match: gi|48145955|emb|CAG33200.1| score: 245 e-value: 5e-63 Identity: 53.3% Span: 660bp (62.9%) Frame: 2
CPSF5 [Homo sapiens]
Match: gi|47230369|emb|CAF99562.1| score: 245 e-value: 4e-63 Identity: 57.87% Span: 591bp (56.3%) Frame: 2
unnamed protein product [Tetraodon nigroviridis]
Match: gi|189531528|ref|XP_001921533.1| score: 244 e-value: 1e-62 Identity: 58.16% Span: 588bp (56.1%) Frame: 2
PREDICTED:
Match: gi|119390446|pdb|2J8Q|A score: 244 e-value: 1e-62 Identity: 57.87% Span: 591bp (56.3%) Frame: 2
Chain A, Crystal Structure Of Human Cleavage And Polyadenylation Specificity Factor 5 (Cpsf5) In Complex With A Sulph...
Match: gi|109157347|pdb|2CL3|A score: 244 e-value: 1e-62 Identity: 57.87% Span: 591bp (56.3%) Frame: 2
Chain A, Crystal Structure Of Human Cleavage And Polyadenylation Specificity Factor 5 (Cpsf5)
Match: gi|168177228|pdb|3BHO|A score: 244 e-value: 1e-62 Identity: 57.87% Span: 591bp (56.3%) Frame: 2
Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage Factor Im
Match: gi|168177225|pdb|3BAP|A score: 243 e-value: 2e-62 Identity: 52.86% Span: 660bp (62.9%) Frame: 2
Chain
Match: gi|73973808|ref|XP_539001.2| score: 242 e-value: 3e-62 Identity: 59.79% Span: 567bp (54.1%) Frame: 2
PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Canis familiaris]
Match: gi|66499810|ref|XP_624522.1| score: 241 e-value: 6e-62 Identity: 54.26% Span: 669bp (63.8%) Frame: 2
gi|66499810|ref|XP_624522.1| PREDICTED: similar to cleavage and polyadenylation specific factor 5 [Apis mellifera]
Match: gi|109128665|ref|XP_001096261.1| score: 241 e-value: 1e-61 Identity: 57.95% Span: 585bp (55.8%) Frame: 2
PREDICTED:
Match: gi|212515461|gb|EEB17599.1| score: 241 e-value: 1e-61 Identity: 53.52% Span: 639bp (60.9%) Frame: 2
Cleavage
Match: gi|197128966|gb|ACH45464.1| score: 240 e-value: 2e-61 Identity: 53.39% Span: 636bp (60.6%) Frame: 2
putative cleavage and polyadenylation specific factor 5 [Taeniopygia guttata]
Match: gi|18417474|ref|NP_567835.1| score: 240 e-value: 2e-61 Identity: 55.72% Span: 603bp (57.5%) Frame: 2
CFIM-25 [Arabidopsis thaliana] >gi15081674|gb|AAK82492.1| AT4g29820/F27B13_60 [Arabidopsis thaliana] >gi|20147173|gb|...
Match: gi|157342597|emb|CAO65309.1| score: 240 e-value: 1e-61 Identity: 55.96% Span: 579bp (55.2%) Frame: 2
unnamed
Match: gi|156048430|ref|XP_001590182.1| score: 240 e-value: 1e-61 Identity: 54.82% Span: 576bp (54.9%) Frame: 2
conserved
Match: gi|157105268|ref|XP_001648792.1| score: 239 e-value: 4e-61 Identity: 58.38% Span: 591bp (56.3%) Frame: 2
pre-mrna
Match: gi|209734540|gb|ACI68139.1| score: 239 e-value: 2e-61 Identity: 52.21% Span: 678bp (64.6%) Frame: 2
Cleavage
Match: gi|171686284|ref|XP_001908083.1| score: 239 e-value: 4e-61 Identity: 56.85% Span: 579bp (55.2%) Frame: 2
unnamed
Match: gi|118778290|ref|XP_308558.3| score: 238 e-value: 6e-61 Identity: 55.4% Span: 636bp (60.6%) Frame: 2
ENSANGP00000016021
Match: gi|116007798|ref|NP_001036597.1| score: 238 e-value: 6e-61 Identity: 60.32% Span: 567bp (54.1%) Frame: 2
CG3689-PC,
Match: gi|209734330|gb|ACI68034.1| score: 238 e-value: 6e-61 Identity: 56.85% Span: 591bp (56.3%) Frame: 2
Cleavage
Match: gi|119182817|ref|XP_001242516.1| score: 237 e-value: 1e-60 Identity: 49.12% Span: 669bp (63.8%) Frame: 2
conserved
Match: gi|215507650|gb|EEC17142.1| score: 237 e-value: 1e-60 Identity: 59.79% Span: 567bp (54.1%) Frame: 2
mRNA
Match: gi|46125059|ref|XP_387083.1| score: 237 e-value: 1e-60 Identity: 56.12% Span: 576bp (54.9%) Frame: 2
gi|46125059|ref|XP_387083.1| conserved hypothetical protein [Gibberella zeae PH-1] >gi|42553653|gb|EAA76496.1| conser...
Match: gi|116207818|ref|XP_001229718.1| score: 236 e-value: 2e-60 Identity: 55.84% Span: 579bp (55.2%) Frame: 2
conserved
Match: gi|114051528|ref|NP_001040354.1| score: 236 e-value: 2e-60 Identity: 59.26% Span: 567bp (54.1%) Frame: 2
cleavage
Match: gi|85089870|ref|XP_958148.1| score: 236 e-value: 3e-60 Identity: 56.63% Span: 576bp (54.9%) Frame: 2
hypothetical
Match: gi|121719266|ref|XP_001276338.1| score: 236 e-value: 3e-60 Identity: 53.81% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|70985266|ref|XP_748139.1| score: 236 e-value: 3e-60 Identity: 53.3% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|119499145|ref|XP_001266330.1| score: 235 e-value: 4e-60 Identity: 53.3% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|91093207|ref|XP_969509.1| score: 234 e-value: 7e-60 Identity: 59.04% Span: 564bp (53.8%) Frame: 2
PREDICTED:
Match: gi|169771819|ref|XP_001820379.1| score: 234 e-value: 1e-59 Identity: 52.79% Span: 576bp (54.9%) Frame: 2
hypothetical
Match: gi|198421202|ref|XP_002122804.1| score: 234 e-value: 9e-60 Identity: 57.67% Span: 567bp (54.1%) Frame: 2
PREDICTED:
Match: gi|193591923|ref|XP_001944073.1| score: 234 e-value: 7e-60 Identity: 58.73% Span: 567bp (54.1%) Frame: 2
PREDICTED:
Match: gi|154284992|ref|XP_001543291.1| score: 234 e-value: 7e-60 Identity: 53.3% Span: 576bp (54.9%) Frame: 2
hypothetical
Match: gi|211590185|emb|CAP96357.1| score: 234 e-value: 9e-60 Identity: 54.31% Span: 576bp (54.9%) Frame: 2
Pc21g14600
Match: gi|145251974|ref|XP_001397500.1| score: 233 e-value: 3e-59 Identity: 52.79% Span: 576bp (54.9%) Frame: 2
hypothetical
Match: gi|218725132|gb|EED24549.1| score: 232 e-value: 3e-59 Identity: 53.3% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|169616107|ref|XP_001801469.1| score: 232 e-value: 5e-59 Identity: 54.31% Span: 576bp (54.9%) Frame: 2
hypothetical
Match: gi|39952067|ref|XP_363750.1| score: 231 e-value: 6e-59 Identity: 54.08% Span: 576bp (54.9%) Frame: 2
gi|39952067|ref|XP_363750.1| hypothetical protein MG01676.4 [Magnaporthe grisea 70-15]
Match: gi|72008807|ref|XP_784907.1| score: 229 e-value: 2e-58 Identity: 59.68% Span: 558bp (53.2%) Frame: 2
gi|72008807|ref|XP_784907.1| PREDICTED: similar to cleavage and polyadenylation specific factor 5 [Strongylocentrotus...
Match: gi|156545052|ref|XP_001600794.1| score: 229 e-value: 4e-58 Identity: 57.14% Span: 567bp (54.1%) Frame: 2
PREDICTED:
Match: gi|212541905|ref|XP_002151107.1| score: 229 e-value: 3e-58 Identity: 52.79% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|156401665|ref|XP_001639411.1| score: 228 e-value: 5e-58 Identity: 58.6% Span: 549bp (52.3%) Frame: 2
predicted
Match: gi|170584698|ref|XP_001897131.1| score: 228 e-value: 7e-58 Identity: 53.15% Span: 621bp (59.2%) Frame: 2
Pre-mrna
Match: gi|118096216|ref|XP_414064.2| score: 223 e-value: 2e-56 Identity: 53.11% Span: 600bp (57.2%) Frame: 2
PREDICTED: similar to autocrine motility factor receptor [Gallus gallus]
Match: gi|66825117|ref|XP_645913.1| score: 219 e-value: 2e-55 Identity: 58.7% Span: 549bp (52.3%) Frame: 2
gi|66825117|ref|XP_645913.1| hypothetical protein DDB0190212 [Dictyostelium discoideum] >gi|60474098|gb|EAL72035.1| h...
Match: gi|195167841|ref|XP_002024741.1| score: 215 e-value: 6e-54 Identity: 54.5% Span: 567bp (54.1%) Frame: 2
GL22627
Match: gi|116789706|gb|ABK25350.1| score: 215 e-value: 6e-54 Identity: 53.12% Span: 576bp (54.9%) Frame: 2
unknown
Match: gi|157747311|ref|XP_001668750.1| score: 214 e-value: 7e-54 Identity: 55.03% Span: 567bp (54.1%) Frame: 2
Hypothetical
Match: gi|17507315|ref|NP_492334.1| score: 214 e-value: 7e-54 Identity: 55.03% Span: 567bp (54.1%) Frame: 2
gi|17507315|ref|NP_492334.1| cleavage polyadenylation specific factor 5 (25.9 kD) (1J193) [Caenorhabditis elegans] gi...
Match: gi|145350060|ref|XP_001419441.1| score: 211 e-value: 1e-52 Identity: 55.15% Span: 576bp (54.9%) Frame: 2
predicted
Match: gi|219464991|ref|XP_002230169.1| score: 210 e-value: 2e-52 Identity: 55.93% Span: 531bp (50.6%) Frame: 2
hypothetical
Match: gi|116059404|emb|CAL55111.1| score: 208 e-value: 5e-52 Identity: 56.19% Span: 576bp (54.9%) Frame: 2
mRNA
Match: gi|193618040|ref|XP_001951264.1| score: 207 e-value: 2e-51 Identity: 48.84% Span: 633bp (60.3%) Frame: 2
PREDICTED:
Match: gi|195610244|gb|ACG26952.1| score: 202 e-value: 4e-50 Identity: 48.73% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|196012174|ref|XP_002115950.1| score: 199 e-value: 3e-49 Identity: 55.81% Span: 516bp (49.2%) Frame: 2
expressed
Match: gi|118488203|gb|ABK95921.1| score: 198 e-value: 6e-49 Identity: 88.07% Span: 327bp (31.2%) Frame: 2
unknown
Match: gi|154300626|ref|XP_001550728.1| score: 197 e-value: 2e-48 Identity: 55.06% Span: 459bp (43.8%) Frame: 2
hypothetical
Match: gi|210076035|ref|XP_505412.2| score: 196 e-value: 2e-48 Identity: 48.47% Span: 576bp (54.9%) Frame: 2
YALI0F14421p
Match: gi|189210068|ref|XP_001941366.1| score: 195 e-value: 6e-48 Identity: 48.22% Span: 576bp (54.9%) Frame: 2
cleavage
Match: gi|67902116|ref|XP_681314.1| score: 192 e-value: 5e-47 Identity: 49.24% Span: 576bp (54.9%) Frame: 2
gi|67902116|ref|XP_681314.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4] >gi|40740477|gb|EAA59667.1|...
Match: gi|115476302|ref|NP_001061747.1| score: 190 e-value: 2e-46 Identity: 46.08% Span: 576bp (54.9%) Frame: 2
Os08g0398800 [Oryza sativa (japonica cultivar-group)] >gi37805958|dbj|BAC99373.1| putative cleavage and polyadenylati...
Match: gi|125561458|gb|EAZ06906.1| score: 190 e-value: 2e-46 Identity: 46.08% Span: 576bp (54.9%) Frame: 2
hypothetical protein OsI_29145 [Oryza sativa Indica Group]
Match: gi|12848967|dbj|BAB28154.1| score: 186 e-value: 3e-45 Identity: 50.54% Span: 525bp (50.0%) Frame: 2
unnamed protein product [Mus musculus]
Match: gi|194751375|ref|XP_001958002.1| score: 181 e-value: 9e-44 Identity: 51.16% Span: 516bp (49.2%) Frame: 2
GF10694
Match: gi|195015476|ref|XP_001984210.1| score: 180 e-value: 2e-43 Identity: 52.8% Span: 483bp (46.0%) Frame: 2
GH15136
Match: gi|195127095|ref|XP_002008004.1| score: 180 e-value: 2e-43 Identity: 52.8% Span: 483bp (46.0%) Frame: 2
GI12073
Match: gi|195427341|ref|XP_002061735.1| score: 180 e-value: 2e-43 Identity: 50.29% Span: 498bp (47.5%) Frame: 2
GK17156

39 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 2 hits recorded
Match: At4G25550.1 score: 365 e-value: 2e-101 Identity: 85.86% Span: 594bp (56.6%) Frame: 2
similar to ATCFIM-25/CFIM-25 (ARABIDOPSIS HOMOLOG OF CFIM-25) [Arabidopsis thaliana] (TAIR:AT4G29820.1); similar to ...
Match: At4G29820.1 score: 240 e-value: 1e-63 Identity: 55.72% Span: 603bp (57.5%) Frame: 2
Symbols: CFIM-25, ATCFIM-25 | ATCFIM-25/CFIM-25 (ARABIDOPSIS HOMOLOG OF CFIM-25) | chr4:14596053-14597323 REVERSE

swissprot [blastx] Showing best 8 hits recorded
Match: Q6DJE4 score: 253 e-value: 2e-66 Identity: 55.95% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Xenopus laevis GN=cpsf5 PE=2 SV=1
Match: Q9CQF3 score: 248 e-value: 4e-65 Identity: 53.71% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus GN=Nudt21 PE=2 SV=1
Match: Q7T3C6 score: 248 e-value: 4e-65 Identity: 53.51% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Danio rerio GN=cpsf5 PE=2 SV=1
Match: Q4KM65 score: 248 e-value: 4e-65 Identity: 53.71% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus GN=Nudt21 PE=2 SV=1
Match: O43809 score: 248 e-value: 5e-65 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens GN=NUDT21 PE=1 SV=1
Match: Q3ZCA2 score: 248 e-value: 5e-65 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Bos taurus GN=NUDT21 PE=2 SV=1
Match: Q5RAI8 score: 248 e-value: 5e-65 Identity: 53.74% Span: 660bp (62.9%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Pongo abelii GN=NUDT21 PE=2 SV=1
Match: Q55E68 score: 219 e-value: 2e-56 Identity: 58.7% Span: 549bp (52.3%) Frame: 2
Cleavage and polyadenylation specificity factor subunit 5 OS=Dictyostelium discoideum GN=cpsf5 PE=3 SV=1