All Stored BLAST annotations for SGN-U583812
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157360176|emb|CAO69365.1| score: 546 e-value: 3e-153 Identity: 67.01% Span: 1446bp (90.2%) Frame: 1
unnamed
Match: gi|15237896|ref|NP_197800.1| score: 466 e-value: 2e-129 Identity: 58.86% Span: 1446bp (90.2%) Frame: 1
SIGE (SIGMA FACTOR E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha...
Match: gi|125553511|gb|EAY99220.1| score: 355 e-value: 6e-96 Identity: 46.71% Span: 1356bp (84.6%) Frame: 1
hypothetical protein OsI_21178 [Oryza sativa Indica Group]
Match: gi|115465727|ref|NP_001056463.1| score: 354 e-value: 1e-95 Identity: 46.49% Span: 1356bp (84.6%) Frame: 1
Os05g0586600 [Oryza sativa (japonica cultivar-group)] >gi30698488|dbj|BAC76601.1| Sig5 [Oryza sativa Japonica Group] ...
Match: gi|125595383|gb|EAZ35442.1| score: 352 e-value: 4e-95 Identity: 51.39% Span: 1173bp (73.2%) Frame: 1
hypothetical
Match: gi|168029696|ref|XP_001767361.1| score: 202 e-value: 7e-50 Identity: 41.78% Span: 891bp (55.6%) Frame: 1
plastid sigma factor SIG5 [Physcomitrella patens subsp. patens] >gi56603661|dbj|BAD80742.1| plastid sigma factor PpSI...
Match: gi|15010718|gb|AAK74018.1| score: 184 e-value: 2e-44 Identity: 47.4% Span: 840bp (52.4%) Frame: 1
AT5g24120/MLE8_4 [Arabidopsis thaliana]
Match: gi|62320238|dbj|BAD94495.1| score: 166 e-value: 7e-39 Identity: 46.21% Span: 804bp (50.2%) Frame: 1
sigma-like factor [Arabidopsis thaliana]
Match: gi|186687052|ref|YP_001870195.1| score: 125 e-value: 1e-26 Identity: 31.21% Span: 843bp (52.6%) Frame: 1
RNA
Match: gi|16331222|ref|NP_441950.1| score: 121 e-value: 2e-25 Identity: 30.94% Span: 792bp (49.4%) Frame: 1
gi|16331222|ref|NP_441950.1| RNA polymerase sigma factor [Synechocystis sp. PCC 6803] gi|7434780|pir||S76042 transcri...
Match: gi|168009782|ref|XP_001757584.1| score: 121 e-value: 2e-25 Identity: 31.25% Span: 810bp (50.5%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162691278|gb|EDQ77641.1| predicted protein [Physcomitrella...
Match: gi|196191531|gb|EDX86495.1| score: 120 e-value: 3e-25 Identity: 29.43% Span: 843bp (52.6%) Frame: 1
RNA
Match: gi|196254343|ref|ZP_03152882.1| score: 117 e-value: 4e-24 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD family [Cyanothece sp. PCC 7822] >gi196203540|gb|EDX98356.1| RNA polymerase, s...
Match: gi|196244885|ref|ZP_03143610.1| score: 117 e-value: 4e-24 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|218245044|ref|YP_002370415.1| score: 117 e-value: 4e-24 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD subfamily [Cyanothece sp. PCC 8801] >gi257058068|ref|YP_003135956.1| RNA polym...
Match: gi|168009564|ref|XP_001757475.1| score: 117 e-value: 3e-24 Identity: 32.34% Span: 789bp (49.2%) Frame: 1
predicted protein [Physcomitrella patens subsp. patens] >gi162691169|gb|EDQ77532.1| predicted protein [Physcomitrella...
Match: gi|218438948|ref|YP_002377277.1| score: 117 e-value: 2e-24 Identity: 32.58% Span: 789bp (49.2%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD subfamily [Cyanothece sp. PCC 7424] >gi218171676|gb|ACK70409.1| RNA polymerase...
Match: gi|196177205|gb|EDX72213.1| score: 116 e-value: 7e-24 Identity: 32.58% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|186686393|ref|YP_001869589.1| score: 116 e-value: 5e-24 Identity: 33.33% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor RpoD [Nostoc punctiforme PCC 73102] >gi8118663|gb|AAF73062.1|AF265349_1 primary vegetativ...
Match: gi|75812337|ref|YP_319956.1| score: 116 e-value: 7e-24 Identity: 30.71% Span: 837bp (52.2%) Frame: 1
Sigma-28
Match: gi|196192415|gb|EDX87379.1| score: 115 e-value: 9e-24 Identity: 31.82% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|17232755|ref|NP_489303.1| score: 115 e-value: 1e-23 Identity: 33.33% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor RpoD [Nostoc sp. PCC 7120] >gi75907632|ref|YP_321928.1| RNA polymerase sigma factor RpoD ...
Match: gi|170078618|ref|YP_001735256.1| score: 115 e-value: 1e-23 Identity: 32.95% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor [Synechococcus sp. PCC 7002] >gi558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002] >...
Match: gi|1588486|prf||2208419B score: 115 e-value: 1e-23 Identity: 32.95% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor
Match: gi|81299460|ref|YP_399668.1| score: 114 e-value: 2e-23 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
Sigma-70
Match: gi|56750888|ref|YP_171589.1| score: 114 e-value: 2e-23 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
gi|56750888|ref|YP_171589.1| principal RNA polymerase sigma factor RpoD1 [Synechococcus elongatus PCC 6301] >gi|56685...
Match: gi|217140|dbj|BAA01749.1| score: 114 e-value: 2e-23 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.]
Match: gi|172035560|ref|YP_001802061.1| score: 114 e-value: 2e-23 Identity: 31.78% Span: 768bp (47.9%) Frame: 1
group
Match: gi|186680839|ref|YP_001864035.1| score: 114 e-value: 3e-23 Identity: 29.29% Span: 831bp (51.8%) Frame: 1
RNA
Match: gi|196243917|ref|ZP_03142645.1| score: 114 e-value: 3e-23 Identity: 31.78% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|158335492|ref|YP_001516664.1| score: 114 e-value: 2e-23 Identity: 29.08% Span: 843bp (52.6%) Frame: 1
RNA
Match: gi|168012500|ref|XP_001758940.1| score: 114 e-value: 2e-23 Identity: 31.84% Span: 789bp (49.2%) Frame: 1
plastid sigma facor SIG2 [Physcomitrella patens subsp. patens] >gi12697780|dbj|BAB21618.1| PpSIG2 [Physcomitrella pat...
Match: gi|119512308|ref|ZP_01631394.1| score: 113 e-value: 6e-23 Identity: 33.33% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor [Nodularia spumigena CCY9414] >gi119463021|gb|EAW43972.1| RNA polymerase sigma factor [No...
Match: gi|209523577|ref|ZP_03272131.1| score: 113 e-value: 6e-23 Identity: 32.58% Span: 789bp (49.2%) Frame: 1
RNA polymerase, sigma 70 subunit, RpoD family [Arthrospira maxima CS-328] >gi209495982|gb|EDZ96283.1| RNA polymerase,...
Match: gi|218439771|ref|YP_002378100.1| score: 113 e-value: 6e-23 Identity: 31.4% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|17233195|ref|NP_490285.1| score: 113 e-value: 4e-23 Identity: 30.71% Span: 837bp (52.2%) Frame: 1
gi|17233195|ref|NP_490285.1| group 2 sigma 70-type sigma factor [Nostoc sp. PCC 7120] gi|25288483|pir||AC2500 group 2...
Match: gi|196242349|ref|ZP_03141103.1| score: 112 e-value: 7e-23 Identity: 31.82% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|166364164|ref|YP_001656437.1| score: 112 e-value: 1e-22 Identity: 32.17% Span: 768bp (47.9%) Frame: 1
group
Match: gi|196254691|ref|ZP_03153230.1| score: 112 e-value: 1e-22 Identity: 31.4% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|196190148|gb|EDX85112.1| score: 112 e-value: 1e-22 Identity: 29.06% Span: 792bp (49.4%) Frame: 1
RNA
Match: gi|159029420|emb|CAO90796.1| score: 112 e-value: 1e-22 Identity: 30.39% Span: 837bp (52.2%) Frame: 1
unnamed
Match: gi|159027100|emb|CAO89285.1| score: 112 e-value: 7e-23 Identity: 32.17% Span: 768bp (47.9%) Frame: 1
rpoD
Match: gi|126661338|ref|ZP_01732404.1| score: 112 e-value: 1e-22 Identity: 31.4% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|196189146|gb|EDX84110.1| score: 111 e-value: 2e-22 Identity: 29.08% Span: 837bp (52.2%) Frame: 1
RNA
Match: gi|119489756|ref|ZP_01622514.1| score: 111 e-value: 2e-22 Identity: 32.58% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|166368031|ref|YP_001660304.1| score: 111 e-value: 2e-22 Identity: 30.04% Span: 837bp (52.2%) Frame: 1
group
Match: gi|37523331|ref|NP_926708.1| score: 111 e-value: 2e-22 Identity: 31.5% Span: 813bp (50.7%) Frame: 1
gi|37523331|ref|NP_926708.1| group2 RNA polymerase sigma factor [Gloeobacter violaceus] gi|35214335|dbj|BAC91703.1| g...
Match: gi|19910024|dbj|BAB87263.1| score: 110 e-value: 5e-22 Identity: 30.04% Span: 798bp (49.8%) Frame: 1
gi|19910024|dbj|BAB87263.1| RNA polymerase sigma factor [Cyanophora paradoxa]
Match: gi|169883528|gb|ACA97859.1| score: 110 e-value: 5e-22 Identity: 30.04% Span: 837bp (52.2%) Frame: 1
RNA
Match: gi|1769413|dbj|BAA13122.1| score: 110 e-value: 4e-22 Identity: 30.39% Span: 837bp (52.2%) Frame: 1
gi|1769413|dbj|BAA13122.1| RpoD2 sigma factor [Microcystis aeruginosa]
Match: gi|113477482|ref|YP_723543.1| score: 110 e-value: 3e-22 Identity: 28.68% Span: 792bp (49.4%) Frame: 1
RNA
Match: gi|67924587|ref|ZP_00518002.1| score: 110 e-value: 3e-22 Identity: 31.4% Span: 768bp (47.9%) Frame: 1
Sigma-70
Match: gi|162605994|ref|XP_001713512.1| score: 109 e-value: 8e-22 Identity: 32.38% Span: 723bp (45.1%) Frame: 1
RNA-polymerase
Match: gi|170076992|ref|YP_001733630.1| score: 109 e-value: 6e-22 Identity: 28.27% Span: 837bp (52.2%) Frame: 1
Group
Match: gi|145347899|ref|XP_001418397.1| score: 109 e-value: 6e-22 Identity: 31.49% Span: 837bp (52.2%) Frame: 1
predicted
Match: gi|119511025|ref|ZP_01630145.1| score: 108 e-value: 1e-21 Identity: 28.21% Span: 813bp (50.7%) Frame: 1
RNA
Match: gi|158334991|ref|YP_001516163.1| score: 108 e-value: 2e-21 Identity: 31.82% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|160331013|ref|XP_001712214.1| score: 108 e-value: 1e-21 Identity: 29.7% Span: 894bp (55.8%) Frame: 1
rpoD
Match: gi|186685842|ref|YP_001869038.1| score: 108 e-value: 2e-21 Identity: 28.21% Span: 837bp (52.2%) Frame: 1
RNA
Match: gi|159026170|emb|CAO88820.1| score: 108 e-value: 2e-21 Identity: 27.92% Span: 792bp (49.4%) Frame: 1
unnamed
Match: gi|113477826|ref|YP_723887.1| score: 108 e-value: 2e-21 Identity: 31.6% Span: 633bp (39.5%) Frame: 1
RNA
Match: gi|218247332|ref|YP_002372703.1| score: 108 e-value: 2e-21 Identity: 30.62% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|209527735|ref|ZP_03276230.1| score: 108 e-value: 2e-21 Identity: 30.23% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|113478384|ref|YP_724445.1| score: 108 e-value: 1e-21 Identity: 31.82% Span: 789bp (49.2%) Frame: 1
RNA
Match: gi|22298374|ref|NP_681621.1| score: 108 e-value: 2e-21 Identity: 31.01% Span: 768bp (47.9%) Frame: 1
gi|22298374|ref|NP_681621.1| group 2 RNA polymerase sigma factor [Thermosynechococcus elongatus BP-1] gi|22294553|dbj...
Match: gi|186681941|ref|YP_001865137.1| score: 107 e-value: 4e-21 Identity: 27.96% Span: 909bp (56.7%) Frame: 1
RNA
Match: gi|22297808|ref|NP_681055.1| score: 107 e-value: 4e-21 Identity: 28.3% Span: 792bp (49.4%) Frame: 1
gi|22297808|ref|NP_681055.1| group2 RNA polymerase sigma factor [Thermosynechococcus elongatus BP-1] gi|22293985|dbj|...
Match: gi|75908113|ref|YP_322409.1| score: 107 e-value: 4e-21 Identity: 28.57% Span: 813bp (50.7%) Frame: 1
RNA
Match: gi|116058189|emb|CAL53378.1| score: 107 e-value: 3e-21 Identity: 30.41% Span: 915bp (57.1%) Frame: 1
SigA
Match: gi|196238683|ref|ZP_03137458.1| score: 107 e-value: 2e-21 Identity: 27.62% Span: 849bp (53.0%) Frame: 1
RNA
Match: gi|4105839|gb|AAD02575.1| score: 107 e-value: 3e-21 Identity: 31.85% Span: 723bp (45.1%) Frame: 1
gi|4105839|gb|AAD02575.1| RNA polymerase sigma factor; RpoD2 [Cyanidium caldarium]
Match: gi|186683480|ref|YP_001866676.1| score: 107 e-value: 2e-21 Identity: 27.55% Span: 879bp (54.8%) Frame: 1
RNA
Match: gi|196244562|ref|ZP_03143288.1| score: 107 e-value: 2e-21 Identity: 30.62% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|166367266|ref|YP_001659539.1| score: 107 e-value: 3e-21 Identity: 27.92% Span: 792bp (49.4%) Frame: 1
group
Match: gi|75907421|ref|YP_321717.1| score: 107 e-value: 3e-21 Identity: 27.86% Span: 831bp (51.8%) Frame: 1
Sigma
Match: gi|6273430|emb|CAB60192.1| score: 107 e-value: 2e-21 Identity: 29.43% Span: 789bp (49.2%) Frame: 1
putative sigma-like transcription factor [Arabidopsis thaliana]
Match: gi|17231741|ref|NP_488289.1| score: 107 e-value: 3e-21 Identity: 27.5% Span: 831bp (51.8%) Frame: 1
gi|17231741|ref|NP_488289.1| group 2 sigma 70-type sigma factor F [Nostoc sp. PCC 7120] gi|25288487|pir||AB2337 group...
Match: gi|158336372|ref|YP_001517546.1| score: 107 e-value: 2e-21 Identity: 28.3% Span: 792bp (49.4%) Frame: 1
RNA
Match: gi|67925121|ref|ZP_00518496.1| score: 107 e-value: 2e-21 Identity: 28.98% Span: 837bp (52.2%) Frame: 1
Sigma-70
Match: gi|158337702|ref|YP_001518878.1| score: 107 e-value: 4e-21 Identity: 28.68% Span: 792bp (49.4%) Frame: 1
RNA
Match: gi|18404292|ref|NP_565856.1| score: 107 e-value: 2e-21 Identity: 29.43% Span: 789bp (49.2%) Frame: 1
SIGF (RNA POLYMERASE SIGMA-SUBUNIT F); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor ...
Match: gi|119493081|ref|ZP_01624006.1| score: 106 e-value: 7e-21 Identity: 27.17% Span: 819bp (51.1%) Frame: 1
Sigma
Match: gi|170077819|ref|YP_001734457.1| score: 106 e-value: 7e-21 Identity: 31.01% Span: 768bp (47.9%) Frame: 1
sigma-70
Match: gi|157347545|emb|CAO18182.1| score: 106 e-value: 7e-21 Identity: 31.15% Span: 726bp (45.3%) Frame: 1
unnamed
Match: gi|119509984|ref|ZP_01629125.1| score: 106 e-value: 5e-21 Identity: 28.21% Span: 831bp (51.8%) Frame: 1
group
Match: gi|19910022|dbj|BAB87262.1| score: 105 e-value: 9e-21 Identity: 31.56% Span: 723bp (45.1%) Frame: 1
gi|19910022|dbj|BAB87262.1| RNA polymerase sigma factor [Guillardia theta]
Match: gi|218441429|ref|YP_002379758.1| score: 105 e-value: 2e-20 Identity: 28.68% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|196241468|ref|ZP_03140231.1| score: 105 e-value: 1e-20 Identity: 28.78% Span: 828bp (51.7%) Frame: 1
RNA
Match: gi|196179584|gb|EDX74578.1| score: 105 e-value: 9e-21 Identity: 30.32% Span: 660bp (41.2%) Frame: 1
RNA
Match: gi|86606677|ref|YP_475440.1| score: 105 e-value: 1e-20 Identity: 28.21% Span: 894bp (55.8%) Frame: 1
RNA
Match: gi|119489578|ref|ZP_01622338.1| score: 105 e-value: 2e-20 Identity: 27.92% Span: 792bp (49.4%) Frame: 1
RNA
Match: gi|186684216|ref|YP_001867412.1| score: 104 e-value: 2e-20 Identity: 28.3% Span: 792bp (49.4%) Frame: 1
RpoD
Match: gi|196183608|gb|EDX78591.1| score: 104 e-value: 2e-20 Identity: 27.46% Span: 843bp (52.6%) Frame: 1
RNA
Match: gi|86607034|ref|YP_475797.1| score: 104 e-value: 2e-20 Identity: 33.93% Span: 669bp (41.7%) Frame: 1
RNA
Match: gi|218440063|ref|YP_002378392.1| score: 104 e-value: 3e-20 Identity: 28.57% Span: 849bp (53.0%) Frame: 1
RNA
Match: gi|172038507|ref|YP_001805008.1| score: 104 e-value: 2e-20 Identity: 29.03% Span: 648bp (40.4%) Frame: 1
group
Match: gi|33863339|ref|NP_894899.1| score: 104 e-value: 2e-20 Identity: 28.09% Span: 765bp (47.7%) Frame: 1
gi|33863339|ref|NP_894899.1| Type II alternative RNA polymerase sigma factor, sigma-70 family [Prochlorococcus marinu...
Match: gi|119492598|ref|ZP_01623816.1| score: 104 e-value: 2e-20 Identity: 31.01% Span: 768bp (47.9%) Frame: 1
RNA
Match: gi|33862400|ref|NP_893960.1| score: 104 e-value: 2e-20 Identity: 28.09% Span: 765bp (47.7%) Frame: 1
gi|33862400|ref|NP_893960.1| Type II alternative RNA polymerase sigma factor, sigma-70 family [Prochlorococcus marinu...
Match: gi|17158751|ref|NP_478262.1| score: 104 e-value: 3e-20 Identity: 27.18% Span: 891bp (55.6%) Frame: 1
gi|17158751|ref|NP_478262.1| transcription initiation factor sigma [Nostoc sp. PCC 7120] gi|464687|sp|Q03065|RPSB_ANA...

150 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 5 hits recorded
Match: At5G24120.1 score: 466 e-value: 1e-131 Identity: 58.86% Span: 1446bp (90.2%) Frame: 1
Symbols: SIG5, SIGE | SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor...
Match: At2G36990.1 score: 107 e-value: 2e-23 Identity: 29.43% Span: 789bp (49.2%) Frame: 1
Symbols: SIG6, SIGF | SIGF (RNA POLYMERASE SIGMA-70 FACTOR); DNA binding / DNA-directed RNA polymerase/ transcriptio...
Match: At1G08540.1 score: 97.4 e-value: 2e-20 Identity: 31.02% Span: 717bp (44.7%) Frame: 1
Symbols: SIGA, SIG2, SIGB | SIGB (SIGMA FACTOR B); DNA binding / DNA-directed RNA polymerase/ transcription factor |...
Match: At1G64860.1 score: 83.6 e-value: 3e-16 Identity: 31.09% Span: 567bp (35.4%) Frame: 1
Symbols: SIG1, SIG2, SIGB, RPOD1, SIGA | SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcrip...
Match: At5G13730.1 score: 65.5 e-value: 9e-11 Identity: 26.96% Span: 588bp (36.7%) Frame: 1
Symbols: SIGD, SIG4 | SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor | chr5:...

swissprot [blastx] Showing best 77 hits recorded
Match: P26683 score: 115 e-value: 7e-25 Identity: 33.33% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Anabaena sp. (strain PCC 7120) GN=rpoD PE=3 SV=1
Match: P38023 score: 114 e-value: 1e-24 Identity: 32.2% Span: 789bp (49.2%) Frame: 1
RNA polymerase sigma factor rpoD1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpoD1
Match: Q03065 score: 104 e-value: 2e-21 Identity: 27.18% Span: 891bp (55.6%) Frame: 1
RNA polymerase sigma-B factor OS=Anabaena sp. (strain PCC 7120) GN=sigB PE=3 SV=1
Match: P74565 score: 98.2 e-value: 1e-19 Identity: 32.22% Span: 714bp (44.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Synechocystis sp. (strain PCC 6803) GN=rpoD PE=3 SV=1
Match: P52322 score: 95.5 e-value: 8e-19 Identity: 33.33% Span: 645bp (40.2%) Frame: 1
RNA polymerase sigma factor rpoD1 OS=Microcystis aeruginosa GN=rpoD1 PE=3 SV=1
Match: P33452 score: 93.2 e-value: 4e-18 Identity: 28.94% Span: 924bp (57.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpoD PE=3 SV=2
Match: P18333 score: 90.5 e-value: 2e-17 Identity: 31.74% Span: 495bp (30.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Chlamydia trachomatis GN=rpoD PE=3 SV=2
Match: P17531 score: 90.5 e-value: 2e-17 Identity: 25.29% Span: 942bp (58.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Myxococcus xanthus GN=rpoD PE=3 SV=1
Match: Q59753 score: 90.5 e-value: 2e-17 Identity: 29.26% Span: 924bp (57.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rhizobium meliloti GN=rpoD PE=3 SV=1
Match: P56835 score: 90.5 e-value: 2e-17 Identity: 31.74% Span: 495bp (30.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Chlamydia muridarum GN=rpoD PE=3 SV=1
Match: P77994 score: 90.1 e-value: 3e-17 Identity: 30.43% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Thermotoga maritima GN=rpoD PE=1 SV=3
Match: P46400 score: 90.1 e-value: 3e-17 Identity: 27.64% Span: 768bp (47.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rhodobacter capsulatus GN=rpoD PE=2 SV=1
Match: O66381 score: 90.1 e-value: 3e-17 Identity: 31.88% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Bacillus halodurans GN=sigA PE=3 SV=2
Match: Q9Z7F0 score: 89.4 e-value: 5e-17 Identity: 31.14% Span: 495bp (30.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Chlamydia pneumoniae GN=rpoD PE=3 SV=1
Match: P77951 score: 89.4 e-value: 5e-17 Identity: 32.39% Span: 501bp (31.3%) Frame: 1
RNA polymerase principal sigma factor hrdB OS=Streptomyces griseus GN=hrdB PE=1 SV=1
Match: P18183 score: 89 e-value: 7e-17 Identity: 33.77% Span: 447bp (27.9%) Frame: 1
RNA polymerase principal sigma factor hrdB OS=Streptomyces coelicolor GN=hrdB PE=3 SV=2
Match: Q92BQ6 score: 88.6 e-value: 9e-17 Identity: 28.43% Span: 897bp (56.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Listeria innocua GN=rpoD PE=3 SV=1
Match: P52331 score: 88.6 e-value: 9e-17 Identity: 28.43% Span: 897bp (56.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Listeria monocytogenes GN=rpoD PE=3 SV=1
Match: P33656 score: 88.6 e-value: 9e-17 Identity: 29.49% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Clostridium acetobutylicum GN=rpoD PE=3 SV=1
Match: Q03066 score: 88.2 e-value: 1e-16 Identity: 27.68% Span: 744bp (46.4%) Frame: 1
RNA polymerase sigma-C factor OS=Anabaena sp. (strain PCC 7120) GN=sigC PE=3 SV=2
Match: P52328 score: 87.8 e-value: 2e-16 Identity: 33.19% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Bacillus sp. GN=sigA PE=3 SV=1
Match: P26480 score: 87.4 e-value: 2e-16 Identity: 24% Span: 777bp (48.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Pseudomonas aeruginosa GN=rpoD PE=3 SV=1
Match: P0A4I9 score: 86.7 e-value: 4e-16 Identity: 32.5% Span: 474bp (29.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae GN=rpoD PE=3 SV=1
Match: P0A4J0 score: 86.7 e-value: 4e-16 Identity: 32.5% Span: 474bp (29.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rpoD PE=3 SV=1
Match: Q60012 score: 86.3 e-value: 5e-16 Identity: 30.13% Span: 681bp (42.5%) Frame: 1
RNA polymerase principal sigma factor hrdD OS=Streptomyces viridifaciens GN=hrdD
Match: P43766 score: 86.3 e-value: 5e-16 Identity: 27.2% Span: 777bp (48.5%) Frame: 1
RNA polymerase sigma factor rpoD OS=Haemophilus influenzae GN=rpoD PE=3 SV=1
Match: Q5HNY7 score: 85.9 e-value: 6e-16 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpoD PE=3 SV=1
Match: Q8CP24 score: 85.9 e-value: 6e-16 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpoD PE=3 SV=1
Match: P52329 score: 85.9 e-value: 6e-16 Identity: 31.88% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Enterococcus faecalis GN=rpoD PE=3 SV=2
Match: P52324 score: 85.9 e-value: 6e-16 Identity: 28.51% Span: 639bp (39.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Caulobacter crescentus GN=rpoD PE=3 SV=1
Match: Q99TT5 score: 85.5 e-value: 8e-16 Identity: 31.88% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain N315) GN=rpoD PE=1 SV=1
Match: P0A0I8 score: 85.1 e-value: 1e-15 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpoD PE=1 SV=1
Match: Q6GGD8 score: 85.1 e-value: 1e-15 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MRSA252) GN=rpoD PE=3 SV=1
Match: P0A0J0 score: 85.1 e-value: 1e-15 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain NCTC 8325) GN=rpoD PE=3 SV=1
Match: Q6G905 score: 85.1 e-value: 1e-15 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MSSA476) GN=rpoD PE=3 SV=1
Match: Q5HFJ9 score: 85.1 e-value: 1e-15 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain COL) GN=rpoD PE=3 SV=1
Match: P0A0I9 score: 85.1 e-value: 1e-15 Identity: 31.44% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Staphylococcus aureus (strain MW2) GN=rpoD PE=3 SV=1
Match: P33118 score: 84 e-value: 2e-15 Identity: 31.48% Span: 642bp (40.0%) Frame: 1
RNA polymerase sigma factor sigB OS=Corynebacterium diphtheriae GN=sigB PE=3 SV=2
Match: Q89B10 score: 84 e-value: 2e-15 Identity: 25.66% Span: 879bp (54.8%) Frame: 1
RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpoD PE=3 SV=1
Match: O33662 score: 84 e-value: 2e-15 Identity: 31.88% Span: 474bp (29.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptococcus mutans GN=rpoD PE=3 SV=1
Match: Q83BB6 score: 83.6 e-value: 3e-15 Identity: 28.21% Span: 675bp (42.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Coxiella burnetii GN=rpoD
Match: P0A603 score: 83.6 e-value: 3e-15 Identity: 30.12% Span: 735bp (45.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Mycobacterium bovis GN=rpoD PE=3 SV=1
Match: P0A602 score: 83.6 e-value: 3e-15 Identity: 30.12% Span: 735bp (45.9%) Frame: 1
RNA polymerase sigma factor rpoD OS=Mycobacterium tuberculosis GN=rpoD PE=3 SV=1
Match: P06224 score: 83.6 e-value: 3e-15 Identity: 26.42% Span: 891bp (55.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Bacillus subtilis GN=sigA PE=1 SV=2
Match: O83506 score: 83.6 e-value: 3e-15 Identity: 30.92% Span: 615bp (38.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Treponema pallidum GN=rpoD PE=3 SV=1
Match: O24744 score: 82.8 e-value: 5e-15 Identity: 27.23% Span: 615bp (38.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Shewanella violacea GN=rpoD PE=3 SV=1
Match: Q8PG33 score: 82.8 e-value: 5e-15 Identity: 28.26% Span: 684bp (42.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xanthomonas axonopodis pv. citri GN=rpoD
Match: P52327 score: 82.4 e-value: 7e-15 Identity: 27.71% Span: 660bp (41.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Pseudomonas putida GN=rpoD
Match: Q8P4H2 score: 82.4 e-value: 7e-15 Identity: 28.5% Span: 615bp (38.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xanthomonas campestris pv. campestris GN=rpoD
Match: Q87DT7 score: 82.4 e-value: 7e-15 Identity: 27.27% Span: 675bp (42.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rpoD
Match: P27785 score: 82.4 e-value: 7e-15 Identity: 30.26% Span: 678bp (42.3%) Frame: 1
RNA polymerase sigma factor rpoD OS=Streptomyces aureofaciens GN=rpoD PE=3 SV=1
Match: P18249 score: 82 e-value: 9e-15 Identity: 30.53% Span: 666bp (41.5%) Frame: 1
RNA polymerase principal sigma factor hrdD OS=Streptomyces coelicolor GN=hrdD
Match: P32001 score: 82 e-value: 9e-15 Identity: 24.17% Span: 945bp (59.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpoD PE=3 SV=1
Match: Q59996 score: 82 e-value: 9e-15 Identity: 27.68% Span: 669bp (41.7%) Frame: 1
Probable RNA polymerase sigma-C factor OS=Synechocystis sp. (strain PCC 6803) GN=sigC PE=3 SV=1
Match: P52326 score: 81.6 e-value: 1e-14 Identity: 24.56% Span: 651bp (40.6%) Frame: 1
RNA polymerase sigma factor rpoD OS=Pseudomonas fluorescens GN=rpoD PE=3 SV=1
Match: Q9PDM9 score: 81.6 e-value: 1e-14 Identity: 27.43% Span: 660bp (41.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Xylella fastidiosa GN=rpoD
Match: P18182 score: 80.9 e-value: 2e-14 Identity: 31.65% Span: 648bp (40.4%) Frame: 1
RNA polymerase principal sigma factor hrdA OS=Streptomyces coelicolor GN=hrdA PE=3 SV=2
Match: P0A2E4 score: 80.9 e-value: 2e-14 Identity: 27.38% Span: 723bp (45.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Salmonella typhi GN=rpoD PE=3 SV=1
Match: P33451 score: 80.9 e-value: 2e-14 Identity: 32.04% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia prowazekii GN=rpoD
Match: P0A2E3 score: 80.9 e-value: 2e-14 Identity: 27.38% Span: 723bp (45.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Salmonella typhimurium GN=rpoD PE=3 SV=1
Match: Q68VQ5 score: 80.9 e-value: 2e-14 Identity: 32.04% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia typhi GN=rpoD
Match: Q4UJT1 score: 80.9 e-value: 2e-14 Identity: 32.04% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia felis GN=rpoD
Match: Q92FZ8 score: 80.9 e-value: 2e-14 Identity: 32.04% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia conorii GN=rpoD
Match: P52325 score: 80.5 e-value: 3e-14 Identity: 26.77% Span: 900bp (56.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Neisseria gonorrhoeae GN=rpoD
Match: Q1RKH7 score: 80.5 e-value: 3e-14 Identity: 32.04% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Rickettsia bellii (strain RML369-C) GN=rpoD
Match: P00579 score: 79.3 e-value: 6e-14 Identity: 26.98% Span: 723bp (45.1%) Frame: 1
RNA polymerase sigma factor rpoD OS=Escherichia coli (strain K12) GN=rpoD PE=1 SV=2
Match: P57163 score: 79.3 e-value: 6e-14 Identity: 26.11% Span: 642bp (40.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpoD PE=3 SV=1
Match: P52323 score: 79 e-value: 7e-14 Identity: 27.52% Span: 648bp (40.4%) Frame: 1
RNA polymerase sigma factor rpoD OS=Borrelia burgdorferi GN=rpoD PE=3 SV=2
Match: P58290 score: 79 e-value: 7e-14 Identity: 32.62% Span: 420bp (26.2%) Frame: 1
RNA polymerase sigma factor rpoD (Fragment) OS=Lactococcus lactis subsp. cremoris GN=rpoD
Match: Q04506 score: 78.6 e-value: 1e-13 Identity: 32.62% Span: 420bp (26.2%) Frame: 1
RNA polymerase sigma factor rpoD OS=Lactococcus lactis subsp. lactis GN=rpoD
Match: Q9ZMY3 score: 77.8 e-value: 2e-13 Identity: 31.65% Span: 636bp (39.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Helicobacter pylori J99 GN=rpoD PE=3 SV=1
Match: P59117 score: 77.4 e-value: 2e-13 Identity: 29.13% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Leptospira interrogans GN=rpoD PE=3 SV=1
Match: P61540 score: 77.4 e-value: 2e-13 Identity: 29.13% Span: 609bp (38.0%) Frame: 1
RNA polymerase sigma factor rpoD OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rpoD ...
Match: P55993 score: 77 e-value: 3e-13 Identity: 31.65% Span: 636bp (39.7%) Frame: 1
RNA polymerase sigma factor rpoD OS=Helicobacter pylori GN=rpoD PE=3 SV=1
Match: Q59914 score: 76.6 e-value: 4e-13 Identity: 29.13% Span: 681bp (42.5%) Frame: 1
RNA polymerase principal sigma factor hrdD OS=Streptomyces griseus GN=hrdD
Match: O51804 score: 74.3 e-value: 2e-12 Identity: 29.3% Span: 636bp (39.7%) Frame: 1
RNA polymerase sigma factor rpoS OS=Vibrio cholerae GN=rpoS
Match: P18184 score: 73.2 e-value: 4e-12 Identity: 26.51% Span: 639bp (39.9%) Frame: 1
RNA polymerase principal sigma factor hrdC OS=Streptomyces coelicolor GN=hrdC PE=3 SV=1