All Stored BLAST annotations for SGN-U584331
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|157358557|emb|CAO66233.1| score: 195 e-value: 3e-48 Identity: 88.35% Span: 309bp (42.0%) Frame: 3
unnamed
Match: gi|116780936|gb|ABK21888.1| score: 195 e-value: 3e-48 Identity: 87.38% Span: 309bp (42.0%) Frame: 3
unknown [Picea sitchensis]
Match: gi|21555384|gb|AAM63846.1| score: 194 e-value: 6e-48 Identity: 89.32% Span: 309bp (42.0%) Frame: 3
small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
Match: gi|148909638|gb|ABR17910.1| score: 194 e-value: 4e-48 Identity: 87.38% Span: 309bp (42.0%) Frame: 3
unknown [Picea sitchensis]
Match: gi|18394883|ref|NP_564119.1| score: 194 e-value: 6e-48 Identity: 89.32% Span: 309bp (42.0%) Frame: 3
small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative [Arabidopsis thaliana] >gi8886923|...
Match: gi|194699166|gb|ACF83667.1| score: 193 e-value: 1e-47 Identity: 87.38% Span: 309bp (42.0%) Frame: 3
unknown
Match: gi|194696928|gb|ACF82548.1| score: 193 e-value: 1e-47 Identity: 87.38% Span: 309bp (42.0%) Frame: 3
unknown
Match: gi|125580469|gb|EAZ21400.1| score: 192 e-value: 2e-47 Identity: 86.41% Span: 309bp (42.0%) Frame: 3
hypothetical
Match: gi|195657699|gb|ACG48317.1| score: 192 e-value: 2e-47 Identity: 86.41% Span: 309bp (42.0%) Frame: 3
small nuclear ribonucleoprotein Sm D3 [Zea mays]
Match: gi|195658123|gb|ACG48529.1| score: 192 e-value: 2e-47 Identity: 86.41% Span: 309bp (42.0%) Frame: 3
small nuclear ribonucleoprotein Sm D3 [Zea mays]
Match: gi|195656155|gb|ACG47545.1| score: 192 e-value: 2e-47 Identity: 86.41% Span: 309bp (42.0%) Frame: 3
small nuclear ribonucleoprotein Sm D3 [Zea mays]
Match: gi|115443639|ref|NP_001045599.1| score: 192 e-value: 2e-47 Identity: 86.41% Span: 309bp (42.0%) Frame: 3
Os02g0102700 [Oryza sativa (japonica cultivar-group)] >gi41052905|dbj|BAD07817.1| putative small nuclear ribonucleopr...
Match: gi|115451821|ref|NP_001049511.1| score: 191 e-value: 5e-47 Identity: 85.44% Span: 309bp (42.0%) Frame: 3
Os03g0240800 [Oryza sativa (japonica cultivar-group)] >gi108707095|gb|ABF94890.1| Small nuclear ribonucleoprotein Sm ...
Match: gi|125543063|gb|EAY89202.1| score: 191 e-value: 5e-47 Identity: 85.44% Span: 309bp (42.0%) Frame: 3
hypothetical protein OsI_10698 [Oryza sativa Indica Group] >gi125585557|gb|EAZ26221.1| hypothetical protein OsJ_10089...
Match: gi|168011639|ref|XP_001758510.1| score: 186 e-value: 2e-45 Identity: 86.54% Span: 309bp (42.0%) Frame: 3
predicted protein [Physcomitrella patens subsp. patens] >gi168011861|ref|XP_001758621.1| predicted protein [Physcomit...
Match: gi|147809809|emb|CAN60390.1| score: 186 e-value: 1e-45 Identity: 83.5% Span: 309bp (42.0%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|157347316|emb|CAO17845.1| score: 186 e-value: 1e-45 Identity: 83.5% Span: 309bp (42.0%) Frame: 3
unnamed
Match: gi|147822390|emb|CAN59901.1| score: 185 e-value: 3e-45 Identity: 85.44% Span: 309bp (42.0%) Frame: 3
hypothetical protein [Vitis vinifera]
Match: gi|15223010|ref|NP_177757.1| score: 179 e-value: 2e-43 Identity: 84.47% Span: 309bp (42.0%) Frame: 3
SmD3 (snRNP core protein SmD3) [Arabidopsis thaliana] >gi6554488|gb|AAF16670.1|AC012394_19 putative small nuclear rib...
Match: gi|8778615|gb|AAF79623.1|AC027665_24 score: 178 e-value: 4e-43 Identity: 68.66% Span: 309bp (42.0%) Frame: 3
F5M15.9 [Arabidopsis thaliana]
Match: gi|168003064|ref|XP_001754233.1| score: 161 e-value: 5e-38 Identity: 82.8% Span: 279bp (38.0%) Frame: 3
predicted
Match: gi|159480580|ref|XP_001698360.1| score: 150 e-value: 1e-34 Identity: 66.34% Span: 303bp (41.2%) Frame: 3
small
Match: gi|111226987|ref|XP_001134627.1| score: 148 e-value: 4e-34 Identity: 65% Span: 300bp (40.8%) Frame: 3
LSM
Match: gi|145344044|ref|XP_001416549.1| score: 137 e-value: 1e-30 Identity: 60% Span: 285bp (38.8%) Frame: 3
predicted
Match: gi|219423110|ref|XP_002209354.1| score: 136 e-value: 2e-30 Identity: 64.95% Span: 291bp (39.6%) Frame: 3
hypothetical
Match: gi|156402297|ref|XP_001639527.1| score: 135 e-value: 4e-30 Identity: 60% Span: 300bp (40.8%) Frame: 3
predicted
Match: gi|41054297|ref|NP_956054.1| score: 133 e-value: 1e-29 Identity: 60.82% Span: 291bp (39.6%) Frame: 3
gi|41054297|ref|NP_956054.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa; wu:fa18f04 [Danio rerio] >gi|28278...
Match: gi|156550773|ref|XP_001605596.1| score: 133 e-value: 1e-29 Identity: 63.16% Span: 285bp (38.8%) Frame: 3
PREDICTED:
Match: gi|148227688|ref|NP_001079359.1| score: 132 e-value: 3e-29 Identity: 58.76% Span: 291bp (39.6%) Frame: 3
hypothetical
Match: gi|209732980|gb|ACI67359.1| score: 132 e-value: 3e-29 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
Small
Match: gi|209734524|gb|ACI68131.1| score: 132 e-value: 2e-29 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
Small
Match: gi|47211785|emb|CAF93753.1| score: 132 e-value: 2e-29 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
gi|47211785|emb|CAF93753.1| unnamed protein product [Tetraodon nigroviridis]
Match: gi|4759160|ref|NP_004166.1| score: 132 e-value: 2e-29 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
gi|4759160|ref|NP_004166.1| small nuclear ribonucleoprotein polypeptide D3; snRNP core protein D3 [Homo sapiens] gi|1...
Match: gi|209730588|gb|ACI66163.1| score: 132 e-value: 2e-29 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
Small
Match: gi|194382308|dbj|BAG58909.1| score: 132 e-value: 2e-29 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
unnamed
Match: gi|170087186|ref|XP_001874816.1| score: 132 e-value: 3e-29 Identity: 60.58% Span: 309bp (42.0%) Frame: 3
predicted
Match: gi|74007795|ref|XP_534749.2| score: 131 e-value: 6e-29 Identity: 58.76% Span: 291bp (39.6%) Frame: 3
gi|74007795|ref|XP_534749.2| PREDICTED: similar to small nuclear ribonucleoprotein D3 [Canis familiaris]
Match: gi|91084331|ref|XP_972583.1| score: 130 e-value: 1e-28 Identity: 62.5% Span: 285bp (38.8%) Frame: 3
PREDICTED:
Match: gi|15079335|gb|AAH11510.1| score: 130 e-value: 8e-29 Identity: 58.76% Span: 291bp (39.6%) Frame: 3
gi|15079335|gb|AAH11510.1| Small nuclear ribonucleoprotein D3 [Mus musculus]
Match: gi|169158992|emb|CAQ13721.1| score: 130 e-value: 8e-29 Identity: 60% Span: 300bp (40.8%) Frame: 3
small
Match: gi|215504603|gb|EEC14097.1| score: 130 e-value: 8e-29 Identity: 62% Span: 300bp (40.8%) Frame: 3
small
Match: gi|50344816|ref|NP_001002081.1| score: 130 e-value: 1e-28 Identity: 60% Span: 300bp (40.8%) Frame: 3
gi|50344816|ref|NP_001002081.1| small nuclear ribonucleoprotein D3 polypeptide [Danio rerio] >gi|47938090|gb|AAH71554...
Match: gi|116206378|ref|XP_001228998.1| score: 129 e-value: 2e-28 Identity: 59.22% Span: 309bp (42.0%) Frame: 3
conserved
Match: gi|209732182|gb|ACI66960.1| score: 129 e-value: 2e-28 Identity: 58.76% Span: 291bp (39.6%) Frame: 3
Small
Match: gi|171693559|ref|XP_001911704.1| score: 129 e-value: 2e-28 Identity: 59.22% Span: 309bp (42.0%) Frame: 3
unnamed
Match: gi|212511744|gb|EEB14637.1| score: 129 e-value: 2e-28 Identity: 61% Span: 300bp (40.8%) Frame: 3
Small
Match: gi|85102544|ref|XP_961352.1| score: 129 e-value: 2e-28 Identity: 59.22% Span: 309bp (42.0%) Frame: 3
hypothetical
Match: gi|189199034|ref|XP_001935854.1| score: 129 e-value: 3e-28 Identity: 60.19% Span: 309bp (42.0%) Frame: 3
small
Match: gi|169846820|ref|XP_001830124.1| score: 128 e-value: 4e-28 Identity: 60% Span: 297bp (40.4%) Frame: 3
hypothetical
Match: gi|209731578|gb|ACI66658.1| score: 128 e-value: 5e-28 Identity: 58.33% Span: 288bp (39.2%) Frame: 3
Small
Match: gi|195384527|ref|XP_002050966.1| score: 127 e-value: 9e-28 Identity: 58% Span: 300bp (40.8%) Frame: 3
GJ19907
Match: gi|24652901|ref|NP_725106.1| score: 127 e-value: 9e-28 Identity: 58% Span: 300bp (40.8%) Frame: 3
gi|24652901|ref|NP_725106.1| Small ribonucleoprotein Sm D3 CG8427-PA [Drosophila melanogaster] gi|13124554|sp|O44437|...
Match: gi|194753313|ref|XP_001958958.1| score: 127 e-value: 9e-28 Identity: 58% Span: 300bp (40.8%) Frame: 3
GF12297
Match: gi|195030021|ref|XP_001987867.1| score: 127 e-value: 9e-28 Identity: 58% Span: 300bp (40.8%) Frame: 3
GH19718
Match: gi|169614183|ref|XP_001800508.1| score: 127 e-value: 7e-28 Identity: 59.22% Span: 309bp (42.0%) Frame: 3
hypothetical
Match: gi|195455442|ref|XP_002074722.1| score: 127 e-value: 9e-28 Identity: 58% Span: 300bp (40.8%) Frame: 3
GK23009
Match: gi|58393584|ref|XP_320178.2| score: 127 e-value: 1e-27 Identity: 59.79% Span: 285bp (38.8%) Frame: 3
ENSANGP00000011800
Match: gi|157129367|ref|XP_001661657.1| score: 127 e-value: 7e-28 Identity: 60.82% Span: 285bp (38.8%) Frame: 3
small
Match: gi|167524150|ref|XP_001746411.1| score: 127 e-value: 9e-28 Identity: 55.56% Span: 297bp (40.4%) Frame: 3
predicted
Match: gi|195148972|ref|XP_002015436.1| score: 127 e-value: 1e-27 Identity: 58% Span: 300bp (40.8%) Frame: 3
GL11081
Match: gi|46123175|ref|XP_386141.1| score: 126 e-value: 2e-27 Identity: 57.28% Span: 309bp (42.0%) Frame: 3
gi|46123175|ref|XP_386141.1| hypothetical protein FG05965.1 [Gibberella zeae PH-1] >gi|42552767|gb|EAA75610.1| hypoth...
Match: gi|110758613|ref|XP_001120143.1| score: 126 e-value: 2e-27 Identity: 60% Span: 285bp (38.8%) Frame: 3
PREDICTED:
Match: gi|58264244|ref|XP_569278.1| score: 125 e-value: 2e-27 Identity: 58.42% Span: 300bp (40.8%) Frame: 3
pre-mRNA
Match: gi|170038404|ref|XP_001847040.1| score: 125 e-value: 3e-27 Identity: 58.76% Span: 285bp (38.8%) Frame: 3
small
Match: gi|115497280|ref|NP_001069947.1| score: 125 e-value: 4e-27 Identity: 57.73% Span: 291bp (39.6%) Frame: 3
hypothetical
Match: gi|39944144|ref|XP_361609.1| score: 125 e-value: 4e-27 Identity: 55.34% Span: 309bp (42.0%) Frame: 3
gi|39944144|ref|XP_361609.1| hypothetical protein MG04083.4 [Magnaporthe grisea 70-15]
Match: gi|119174174|ref|XP_001239448.1| score: 124 e-value: 6e-27 Identity: 57.28% Span: 309bp (42.0%) Frame: 3
conserved
Match: gi|157754287|ref|XP_001669487.1| score: 124 e-value: 6e-27 Identity: 60.2% Span: 291bp (39.6%) Frame: 3
Hypothetical
Match: gi|170574009|ref|XP_001892634.1| score: 124 e-value: 7e-27 Identity: 55.56% Span: 297bp (40.4%) Frame: 3
small
Match: gi|154286938|ref|XP_001544264.1| score: 124 e-value: 7e-27 Identity: 57.28% Span: 309bp (42.0%) Frame: 3
conserved
Match: gi|193610931|ref|XP_001951500.1| score: 124 e-value: 9e-27 Identity: 63.86% Span: 249bp (33.9%) Frame: 3
PREDICTED:
Match: gi|212538165|ref|XP_002149238.1| score: 124 e-value: 7e-27 Identity: 57% Span: 300bp (40.8%) Frame: 3
small
Match: gi|196006814|ref|XP_002113273.1| score: 123 e-value: 2e-26 Identity: 63.1% Span: 252bp (34.3%) Frame: 3
hypothetical
Match: gi|154299390|ref|XP_001550114.1| score: 123 e-value: 2e-26 Identity: 56.31% Span: 309bp (42.0%) Frame: 3
hypothetical
Match: gi|211592220|emb|CAP98547.1| score: 123 e-value: 1e-26 Identity: 57% Span: 300bp (40.8%) Frame: 3
Pc22g12590
Match: gi|115492327|ref|XP_001210791.1| score: 122 e-value: 2e-26 Identity: 57% Span: 300bp (40.8%) Frame: 3
small
Match: gi|17542052|ref|NP_503027.1| score: 122 e-value: 3e-26 Identity: 59.18% Span: 291bp (39.6%) Frame: 3
gi|17542052|ref|NP_503027.1| small nuclear ribonucleoprotein, small nuclear ribonucleoprotein SNR-1 (14.8 kD) (snr-1)...
Match: gi|67523101|ref|XP_659611.1| score: 122 e-value: 2e-26 Identity: 57% Span: 300bp (40.8%) Frame: 3
gi|67523101|ref|XP_659611.1| hypothetical protein AN2007.2 [Aspergillus nidulans FGSC A4] >gi|40745683|gb|EAA64839.1|...
Match: gi|70993910|ref|XP_751802.1| score: 121 e-value: 5e-26 Identity: 56% Span: 300bp (40.8%) Frame: 3
small
Match: gi|170585533|ref|XP_001897537.1| score: 121 e-value: 5e-26 Identity: 60% Span: 255bp (34.7%) Frame: 3
small
Match: gi|198436795|ref|XP_002126080.1| score: 121 e-value: 5e-26 Identity: 54.84% Span: 279bp (38.0%) Frame: 3
PREDICTED:
Match: gi|209881474|ref|XP_002142175.1| score: 120 e-value: 8e-26 Identity: 57.14% Span: 294bp (40.0%) Frame: 3
LSM
Match: gi|71023653|ref|XP_762056.1| score: 118 e-value: 5e-25 Identity: 53.47% Span: 300bp (40.8%) Frame: 3
gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521] >gi|46101621|gb|EAK86854.1| hypothe...
Match: gi|66362186|ref|XP_628057.1| score: 117 e-value: 9e-25 Identity: 54% Span: 300bp (40.8%) Frame: 3
gi|66362186|ref|XP_628057.1| small nuclear riboprotein SMD3 [Cryptosporidium parvum] >gi|46227630|gb|EAK88565.1| smal...
Match: gi|212538167|ref|XP_002149239.1| score: 117 e-value: 9e-25 Identity: 56% Span: 300bp (40.8%) Frame: 3
small
Match: gi|67601489|ref|XP_666403.1| score: 117 e-value: 1e-24 Identity: 55.67% Span: 291bp (39.6%) Frame: 3
gi|67601489|ref|XP_666403.1| aspartyl protease-like [Cryptosporidium hominis] >gi|54657392|gb|EAL36172.1| aspartyl pr...
Match: gi|68165953|gb|AAY87930.1| score: 116 e-value: 2e-24 Identity: 55.67% Span: 291bp (39.6%) Frame: 3
gi|68165953|gb|AAY87930.1| small nuclear ribonucleoprotein SM-D3 [Schistosoma mansoni]
Match: gi|56756683|gb|AAW26514.1| score: 116 e-value: 2e-24 Identity: 55.67% Span: 291bp (39.6%) Frame: 3
gi|56756683|gb|AAW26514.1| SJCHGC04758 protein [Schistosoma japonicum]
Match: gi|19112491|ref|NP_595699.1| score: 115 e-value: 3e-24 Identity: 59.76% Span: 246bp (33.5%) Frame: 3
gi|19112491|ref|NP_595699.1| probable small nuclear ribonucleoprotein Sm D3 [Schizosaccharomyces pombe] gi|12230614|s...
Match: gi|45200940|ref|NP_986510.1| score: 113 e-value: 1e-23 Identity: 60.49% Span: 243bp (33.1%) Frame: 3
gi|45200940|ref|NP_986510.1| AGL157Cp [Eremothecium gossypii] >gi|44985710|gb|AAS54334.1| AGL157Cp [Eremothecium goss...
Match: gi|164661203|ref|XP_001731724.1| score: 112 e-value: 3e-23 Identity: 50.5% Span: 300bp (40.8%) Frame: 3
hypothetical
Match: gi|50545379|ref|XP_500227.1| score: 112 e-value: 4e-23 Identity: 64.2% Span: 243bp (33.1%) Frame: 3
gi|50545379|ref|XP_500227.1| hypothetical protein [Yarrowia lipolytica] >gi|49646092|emb|CAG84160.1| unnamed protein ...
Match: gi|156084564|ref|XP_001609765.1| score: 111 e-value: 6e-23 Identity: 56.52% Span: 276bp (37.6%) Frame: 3
small
Match: gi|167378504|ref|XP_001734822.1| score: 110 e-value: 8e-23 Identity: 54.55% Span: 264bp (35.9%) Frame: 3
small
Match: gi|67476256|ref|XP_653731.1| score: 110 e-value: 8e-23 Identity: 54.55% Span: 264bp (35.9%) Frame: 3
gi|67476256|ref|XP_653731.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica HM-1:IMSS] >gi|56470719...
Match: gi|121707652|ref|XP_001271900.1| score: 109 e-value: 2e-22 Identity: 46.67% Span: 300bp (40.8%) Frame: 3
small
Match: gi|145493031|ref|XP_001432512.1| score: 109 e-value: 2e-22 Identity: 51.09% Span: 276bp (37.6%) Frame: 3
hypothetical
Match: gi|145510771|ref|XP_001441315.1| score: 109 e-value: 2e-22 Identity: 51.09% Span: 276bp (37.6%) Frame: 3
hypothetical
Match: gi|211961885|gb|EEA97080.1| score: 109 e-value: 2e-22 Identity: 54.35% Span: 276bp (37.6%) Frame: 3
small
Match: gi|145495655|ref|XP_001433820.1| score: 109 e-value: 2e-22 Identity: 51.09% Span: 276bp (37.6%) Frame: 3
hypothetical

37 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 2 hits recorded
Match: At1G20580.1 score: 194 e-value: 5e-50 Identity: 89.32% Span: 309bp (42.0%) Frame: 3
small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | chr1:7128969-7130361 FORWARD
Match: At1G76300.1 score: 179 e-value: 2e-45 Identity: 84.47% Span: 309bp (42.0%) Frame: 3
Symbols: SMD3 | SMD3 (SNRNP CORE PROTEIN SMD3) | chr1:28630851-28631974 FORWARD

swissprot [blastx] Showing best 7 hits recorded
Match: P62320 score: 132 e-value: 1e-30 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
Small nuclear ribonucleoprotein Sm D3 OS=Mus musculus GN=Snrpd3 PE=1 SV=1
Match: P62318 score: 132 e-value: 1e-30 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
Small nuclear ribonucleoprotein Sm D3 OS=Homo sapiens GN=SNRPD3 PE=1 SV=1
Match: P62323 score: 132 e-value: 1e-30 Identity: 59.79% Span: 291bp (39.6%) Frame: 3
Small nuclear ribonucleoprotein Sm D3 OS=Xenopus laevis GN=snrpd3 PE=2 SV=1
Match: O44437 score: 127 e-value: 6e-29 Identity: 58% Span: 300bp (40.8%) Frame: 3
Small nuclear ribonucleoprotein Sm D3 OS=Drosophila melanogaster GN=SmD3 PE=1 SV=1
Match: Q17348 score: 122 e-value: 2e-27 Identity: 59.18% Span: 291bp (39.6%) Frame: 3
Small nuclear ribonucleoprotein Sm D3 OS=Caenorhabditis elegans GN=snr-1 PE=2 SV=2
Match: Q9UUC6 score: 115 e-value: 2e-25 Identity: 59.76% Span: 246bp (33.5%) Frame: 3
Probable small nuclear ribonucleoprotein Sm D3 OS=Schizosaccharomyces pombe GN=smd3 PE=2 SV=1
Match: P43321 score: 102 e-value: 3e-21 Identity: 50% Span: 258bp (35.1%) Frame: 3
Small nuclear ribonucleoprotein Sm D3 OS=Saccharomyces cerevisiae GN=SMD3 PE=1 SV=1