| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|4090943|gb|AAC98912.1| |
score: 536 |
e-value: 9e-151 |
Identity: 86.73% |
Span: 882bp (99.5%) |
Frame: 1 |
| COP1 homolog [Solanum lycopersicum] |
| Match: gi|224131692|ref|XP_002321154.1| |
score: 521 |
e-value: 3e-146 |
Identity: 85.03% |
Span: 882bp (99.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa] |
| Match: gi|255587080|ref|XP_002534127.1| |
score: 521 |
e-value: 4e-146 |
Identity: 84.69% |
Span: 882bp (99.5%) |
Frame: 1 |
| ubiquitin ligase protein cop1, putative [Ricinus communis] >gi223525812|gb|EEF28255.1| ubiquitin ligase protein cop1,... |
| Match: gi|11127996|gb|AAG31173.1| |
score: 519 |
e-value: 1e-145 |
Identity: 84.35% |
Span: 882bp (99.5%) |
Frame: 1 |
| COP1 [Ipomoea nil] |
| Match: gi|270259000|emb|CBI41056.1| |
score: 516 |
e-value: 1e-144 |
Identity: 83.33% |
Span: 882bp (99.5%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225469127|ref|XP_002270330.1| |
score: 515 |
e-value: 3e-144 |
Identity: 82.99% |
Span: 882bp (99.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Match: gi|225447155|ref|XP_002271415.1| |
score: 514 |
e-value: 6e-144 |
Identity: 84.19% |
Span: 873bp (98.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270241649|emb|CBI28869.1| unnamed protein product [Vitis vinifera] |
| Match: gi|147825286|emb|CAN71084.1| |
score: 513 |
e-value: 1e-143 |
Identity: 84.19% |
Span: 873bp (98.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|15225760|ref|NP_180854.1| |
score: 510 |
e-value: 9e-143 |
Identity: 82.99% |
Span: 882bp (99.5%) |
Frame: 1 |
| COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi20141387... |
| Match: gi|402685|gb|AAA32772.1| |
score: 507 |
e-value: 8e-142 |
Identity: 82.99% |
Span: 882bp (99.5%) |
Frame: 1 |
| regulatory protein [Arabidopsis thaliana] |
| Match: gi|224118164|ref|XP_002331573.1| |
score: 504 |
e-value: 4e-141 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa] |
| Match: gi|218191653|gb|EEC74080.1| |
score: 498 |
e-value: 4e-139 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| hypothetical protein OsI_09100 [Oryza sativa Indica Group] |
| Match: gi|125583833|gb|EAZ24764.1| |
score: 498 |
e-value: 4e-139 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| hypothetical protein OsJ_08537 [Oryza sativa Japonica Group] |
| Match: gi|13925701|gb|AAK49415.1|AF261992_1 |
score: 498 |
e-value: 4e-139 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| COP1 [Oryza sativa Indica Group] |
| Match: gi|46805328|dbj|BAD16847.1| |
score: 498 |
e-value: 4e-139 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| putative COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica Group] |
| Match: gi|7592844|dbj|BAA94422.1| |
score: 498 |
e-value: 4e-139 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| COP1 [Oryza sativa Japonica Group] |
| Match: gi|115448949|ref|NP_001048254.1| |
score: 498 |
e-value: 4e-139 |
Identity: 81.97% |
Span: 882bp (99.5%) |
Frame: 1 |
| Os02g0771100 [Oryza sativa (japonica cultivar-group)] >gi16151847|gb|AAL14875.1| copI [Oryza sativa] >gi|46805327|dbj... |
| Match: gi|226501498|ref|NP_001145835.1| |
score: 496 |
e-value: 1e-138 |
Identity: 81.63% |
Span: 882bp (99.5%) |
Frame: 1 |
| hypothetical protein LOC100279342 [Zea mays] >gi219884613|gb|ACL52681.1| unknown [Zea mays] |
| Match: gi|7688063|emb|CAB89693.1| |
score: 496 |
e-value: 1e-138 |
Identity: 79.59% |
Span: 882bp (99.5%) |
Frame: 1 |
| constitutively photomorphogenic 1 protein [Pisum sativum] |
| Match: gi|15029364|gb|AAK81856.1|AF394913_1 |
score: 495 |
e-value: 2e-138 |
Identity: 80.27% |
Span: 882bp (99.5%) |
Frame: 1 |
| photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar] |
| Match: gi|8574407|emb|CAB94800.1| |
score: 492 |
e-value: 3e-137 |
Identity: 78.91% |
Span: 882bp (99.5%) |
Frame: 1 |
| COP1 regulatory protein [Pisum sativum] |
| Match: gi|3121867|sp|P93471.1|COP1_PEA |
score: 492 |
e-value: 3e-137 |
Identity: 78.91% |
Span: 882bp (99.5%) |
Frame: 1 |
| RecName: Full=E3 ubiquitin-protein ligase COP1; AltName: Full=Constitutive photomorphogenesis protein 1 >gi1694900|em... |
| Match: gi|226503711|ref|NP_001152482.1| |
score: 491 |
e-value: 3e-137 |
Identity: 80.95% |
Span: 882bp (99.5%) |
Frame: 1 |
| ubiquitin ligase protein COP1 [Zea mays] >gi195656705|gb|ACG47820.1| ubiquitin ligase protein COP1 [Zea mays] |
| Match: gi|7688065|emb|CAB89694.1| |
score: 484 |
e-value: 7e-135 |
Identity: 78.98% |
Span: 882bp (99.5%) |
Frame: 1 |
| constitutively photomorphogenic 1 protein [Pisum sativum] |
| Match: gi|224116030|ref|XP_002317189.1| |
score: 483 |
e-value: 1e-134 |
Identity: 79.25% |
Span: 882bp (99.5%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222860254|gb|EEE97801.1| predicted protein [Populus trichocarpa] |
|
| 310 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 18 hits recorded |
| Match: At2G32950.1 |
score: 510 |
e-value: 5e-145 |
Identity: 82.99% |
Span: 882bp (99.5%) |
Frame: 1 |
| Symbols: ATCOP1, DET340, FUS1, EMB168, COP1 | COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) | chr2:13985077-13990359 FORWARD |
| Match: At1G53090.2 |
score: 292 |
e-value: 2e-79 |
Identity: 48.32% |
Span: 873bp (98.5%) |
Frame: 1 |
| Symbols: SPA4 | SPA4 (SPA1-RELATED 4); signal transducer | chr1:19787416-19790358 FORWARD |
| Match: At1G53090.1 |
score: 292 |
e-value: 2e-79 |
Identity: 48.32% |
Span: 873bp (98.5%) |
Frame: 1 |
| Symbols: SPA4 | SPA4 (SPA1-RELATED 4); signal transducer | chr1:19787416-19790358 FORWARD |
| Match: At4G11110.1 |
score: 281 |
e-value: 4e-76 |
Identity: 47.8% |
Span: 855bp (96.5%) |
Frame: 1 |
| Symbols: SPA2 | SPA2 (SPA1-RELATED 2); signal transducer | chr4:6772159-6776671 FORWARD |
| Match: At2G46340.1 |
score: 281 |
e-value: 5e-76 |
Identity: 45.76% |
Span: 855bp (96.5%) |
Frame: 1 |
| Symbols: SPA1 | SPA1 (SUPPRESSOR OF PHYA-105 1); signal transducer | chr2:19029645-19033894 REVERSE |
| Match: At3G15354.1 |
score: 276 |
e-value: 2e-74 |
Identity: 46.98% |
Span: 873bp (98.5%) |
Frame: 1 |
| Symbols: SPA3 | SPA3 (SPA1-RELATED 3); signal transducer | chr3:5169334-5172487 REVERSE |
| Match: At5G23730.1 |
score: 165 |
e-value: 3e-41 |
Identity: 34.85% |
Span: 846bp (95.5%) |
Frame: 1 |
| nucleotide binding | chr5:8005289-8006395 FORWARD |
| Match: At5G52250.1 |
score: 156 |
e-value: 1e-38 |
Identity: 32.67% |
Span: 861bp (97.2%) |
Frame: 1 |
| transducin family protein / WD-40 repeat family protein | chr5:21234124-21235281 FORWARD |
| Match: At4G18900.1 |
score: 76.3 |
e-value: 2e-14 |
Identity: 27.95% |
Span: 651bp (73.5%) |
Frame: 1 |
| transducin family protein / WD-40 repeat family protein | chr4:10356476-10359089 FORWARD |
| Match: At4G35370.1 |
score: 73.2 |
e-value: 2e-13 |
Identity: 26.84% |
Span: 681bp (76.9%) |
Frame: 1 |
| transducin family protein / WD-40 repeat family protein | chr4:16815143-16817291 FORWARD |
| Match: At5G02430.1 |
score: 69.3 |
e-value: 3e-12 |
Identity: 26.18% |
Span: 633bp (71.4%) |
Frame: 1 |
| WD-40 repeat family protein | chr5:526590-529837 FORWARD |
| Match: At4G18905.1 |
score: 69.3 |
e-value: 3e-12 |
Identity: 26.01% |
Span: 621bp (70.1%) |
Frame: 1 |
| transducin family protein / WD-40 repeat family protein | chr4:10360245-10363002 FORWARD |
| Match: At5G23430.2 |
score: 68.2 |
e-value: 6e-12 |
Identity: 25.81% |
Span: 552bp (62.3%) |
Frame: 1 |
| transducin family protein / WD-40 repeat family protein | chr5:7894076-7899865 REVERSE |
| Match: At5G23430.1 |
score: 68.2 |
e-value: 6e-12 |
Identity: 25.81% |
Span: 552bp (62.3%) |
Frame: 1 |
| transducin family protein / WD-40 repeat family protein | chr5:7894076-7899865 REVERSE |
| Match: At5G58230.1 |
score: 68.2 |
e-value: 6e-12 |
Identity: 28.99% |
Span: 459bp (51.8%) |
Frame: 1 |
| Symbols: MEE70, MSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1) | chr5:23573338-23575220 FORWARD |
| Match: At5G08390.1 |
score: 67.4 |
e-value: 1e-11 |
Identity: 26.52% |
Span: 537bp (60.6%) |
Frame: 1 |
| similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G23430.1); simila... |
| Match: At2G16780.1 |
score: 66.6 |
e-value: 2e-11 |
Identity: 24.22% |
Span: 456bp (51.5%) |
Frame: 1 |
| Symbols: MSI02, NFC02, NFC2, MSI2 | MSI2 (NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2) | chr2:7288697-7290665 REV... |
| Match: At4G35050.1 |
score: 65.5 |
e-value: 4e-11 |
Identity: 24.22% |
Span: 456bp (51.5%) |
Frame: 1 |
| Symbols: NFC3, MSI3 | MSI3 (NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3) | chr4:16682757-16684756 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P43254 |
score: 510 |
e-value: 6e-144 |
Identity: 82.99% |
Span: 882bp (99.5%) |
Frame: 1 |
| E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 |
| Match: P93471 |
score: 492 |
e-value: 2e-138 |
Identity: 78.91% |
Span: 882bp (99.5%) |
Frame: 1 |
| E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 |
| Match: Q9R1A8 |
score: 303 |
e-value: 1e-81 |
Identity: 49.32% |
Span: 855bp (96.5%) |
Frame: 1 |
| E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 |
| Match: Q8NHY2 |
score: 303 |
e-value: 1e-81 |
Identity: 49.32% |
Span: 855bp (96.5%) |
Frame: 1 |
| E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 |
| Match: Q94BM7 |
score: 292 |
e-value: 2e-78 |
Identity: 48.32% |
Span: 873bp (98.5%) |
Frame: 1 |
| Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 |
| Match: Q9LJR3 |
score: 292 |
e-value: 2e-78 |
Identity: 48.32% |
Span: 873bp (98.5%) |
Frame: 1 |
| Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 |
| Match: Q9T014 |
score: 281 |
e-value: 4e-75 |
Identity: 47.8% |
Span: 855bp (96.5%) |
Frame: 1 |
| Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 |
| Match: Q9SYX2 |
score: 281 |
e-value: 5e-75 |
Identity: 45.76% |
Span: 855bp (96.5%) |
Frame: 1 |
| Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 |
| Match: Q8C092 |
score: 92.8 |
e-value: 3e-18 |
Identity: 29.07% |
Span: 648bp (73.1%) |
Frame: 1 |
| Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1 |
| Match: Q15542 |
score: 91.3 |
e-value: 8e-18 |
Identity: 28.63% |
Span: 648bp (73.1%) |
Frame: 1 |
| Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3 |
| Match: Q8YRI1 |
score: 80.5 |
e-value: 1e-14 |
Identity: 25.74% |
Span: 705bp (79.6%) |
Frame: 1 |
| Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1 |
| Match: P49846 |
score: 79 |
e-value: 4e-14 |
Identity: 25.94% |
Span: 624bp (70.4%) |
Frame: 1 |
| Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1 |
| Match: Q8YRI1 |
score: 77.8 |
e-value: 9e-14 |
Identity: 31.64% |
Span: 525bp (59.3%) |
Frame: 1 |
| Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1 |
| Match: Q9I8G9 |
score: 77.8 |
e-value: 9e-14 |
Identity: 28.25% |
Span: 585bp (66.0%) |
Frame: 1 |
| Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1 |
| Match: P90916 |
score: 77.4 |
e-value: 1e-13 |
Identity: 27.2% |
Span: 639bp (72.1%) |
Frame: 1 |
| Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2 |
| Match: Q8YRI1 |
score: 77 |
e-value: 2e-13 |
Identity: 30.56% |
Span: 534bp (60.3%) |
Frame: 1 |
| Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1 |
| Match: P49695 |
score: 76.6 |
e-value: 2e-13 |
Identity: 30.27% |
Span: 546bp (61.6%) |
Frame: 1 |
| Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1 |
| Match: Q8BG40 |
score: 76.3 |
e-value: 3e-13 |
Identity: 29.35% |
Span: 594bp (67.0%) |
Frame: 1 |
| Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1 |
| Match: Q9BVA0 |
score: 76.3 |
e-value: 3e-13 |
Identity: 29.35% |
Span: 594bp (67.0%) |
Frame: 1 |
| Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1 |
| Match: Q60972 |
score: 76.3 |
e-value: 3e-13 |
Identity: 27.35% |
Span: 585bp (66.0%) |
Frame: 1 |
| Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=4 |
| Match: Q4R304 |
score: 75.9 |
e-value: 3e-13 |
Identity: 28.25% |
Span: 585bp (66.0%) |
Frame: 1 |
| Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1 |
| Match: Q71UF4 |
score: 75.9 |
e-value: 3e-13 |
Identity: 28.25% |
Span: 585bp (66.0%) |
Frame: 1 |
| Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2 SV=1 |
| Match: Q60973 |
score: 75.9 |
e-value: 3e-13 |
Identity: 28.25% |
Span: 585bp (66.0%) |
Frame: 1 |
| Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1 |
| Match: Q8YRI1 |
score: 70.5 |
e-value: 1e-11 |
Identity: 26.52% |
Span: 537bp (60.6%) |
Frame: 1 |
| Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1 |
| Match: Q8YRI1 |
score: 67.8 |
e-value: 1e-10 |
Identity: 26.49% |
Span: 549bp (62.0%) |
Frame: 1 |
| Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1 |
|
| 57 lower scoring hits censored -- only 25 best hits are stored. |
