| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225435349|ref|XP_002285257.1| |
score: 399 |
e-value: 3e-109 |
Identity: 79.07% |
Span: 774bp (72.6%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147834996|emb|CAN61380.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|224132514|ref|XP_002328307.1| |
score: 393 |
e-value: 2e-107 |
Identity: 74.52% |
Span: 774bp (72.6%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222837822|gb|EEE76187.1| predicted protein [Populus trichocarpa] |
| Match: gi|224106782|ref|XP_002314284.1| |
score: 388 |
e-value: 7e-106 |
Identity: 76.65% |
Span: 768bp (72.0%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222850692|gb|EEE88239.1| predicted protein [Populus trichocarpa] |
| Match: gi|118489169|gb|ABK96391.1| |
score: 387 |
e-value: 2e-105 |
Identity: 76.65% |
Span: 768bp (72.0%) |
Frame: 1 |
| unknown [Populus trichocarpa x Populus deltoides] |
| Match: gi|118487722|gb|ABK95685.1| |
score: 385 |
e-value: 5e-105 |
Identity: 76.26% |
Span: 768bp (72.0%) |
Frame: 1 |
| unknown [Populus trichocarpa] |
| Match: gi|42567185|ref|NP_194479.2| |
score: 368 |
e-value: 7e-100 |
Identity: 72.31% |
Span: 774bp (72.6%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi124300968|gb|ABN04736.1| At4g27490 [A... |
| Match: gi|115474519|ref|NP_001060856.1| |
score: 347 |
e-value: 1e-93 |
Identity: 65.27% |
Span: 771bp (72.3%) |
Frame: 1 |
| Os08g0116800 [Oryza sativa (japonica cultivar-group)] >gi50725627|dbj|BAD33094.1| putative ribonuclease PH [Oryza sat... |
| Match: gi|125546411|gb|EAY92550.1| |
score: 346 |
e-value: 3e-93 |
Identity: 66.15% |
Span: 756bp (70.9%) |
Frame: 1 |
| hypothetical protein OsI_14290 [Oryza sativa Indica Group] |
| Match: gi|41469640|gb|AAS07363.1| |
score: 345 |
e-value: 4e-93 |
Identity: 66.15% |
Span: 756bp (70.9%) |
Frame: 1 |
| putative exoribonuclease [Oryza sativa Japonica Group] >gi108712055|gb|ABF99850.1| 3' exoribonuclease family, domain ... |
| Match: gi|242046408|ref|XP_002461075.1| |
score: 344 |
e-value: 9e-93 |
Identity: 64.98% |
Span: 771bp (72.3%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_02g040250 [Sorghum bicolor] >gi241924452|gb|EER97596.1| hypothetical protein SORBIDRA... |
| Match: gi|294464676|gb|ADE77845.1| |
score: 310 |
e-value: 2e-82 |
Identity: 67.26% |
Span: 660bp (61.9%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|293335373|ref|NP_001168912.1| |
score: 300 |
e-value: 1e-79 |
Identity: 72.28% |
Span: 606bp (56.8%) |
Frame: 1 |
| hypothetical protein LOC100382718 [Zea mays] >gi223973667|gb|ACN31021.1| unknown [Zea mays] |
| Match: gi|255578123|ref|XP_002529931.1| |
score: 266 |
e-value: 4e-69 |
Identity: 76.11% |
Span: 537bp (50.4%) |
Frame: 1 |
| Exosome complex exonuclease RRP41, putative [Ricinus communis] >gi223530561|gb|EEF32439.1| Exosome complex exonucleas... |
| Match: gi|4972074|emb|CAB43881.1| |
score: 231 |
e-value: 1e-58 |
Identity: 47.14% |
Span: 774bp (72.6%) |
Frame: 1 |
| putative protein [Arabidopsis thaliana] >gi7269603|emb|CAB81399.1| putative protein [Arabidopsis thaliana] |
| Match: gi|26452638|dbj|BAC43402.1| |
score: 214 |
e-value: 2e-53 |
Identity: 72.86% |
Span: 420bp (39.4%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|156398683|ref|XP_001638317.1| |
score: 162 |
e-value: 5e-38 |
Identity: 36.68% |
Span: 762bp (71.5%) |
Frame: 1 |
| predicted protein [Nematostella vectensis] >gi156225437|gb|EDO46254.1| predicted protein [Nematostella vectensis] |
| Match: gi|291000756|ref|XP_002682945.1| |
score: 158 |
e-value: 9e-37 |
Identity: 38.56% |
Span: 669bp (62.8%) |
Frame: 1 |
| 3'-5' exoribonuclease/RNA-binding protein-like protein [Naegleria gruberi] >gi284096573|gb|EFC50201.1| 3'-5' exoribon... |
| Match: gi|291237650|ref|XP_002738745.1| |
score: 158 |
e-value: 1e-36 |
Identity: 33.83% |
Span: 780bp (73.2%) |
Frame: 1 |
| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] |
| Match: gi|255076363|ref|XP_002501856.1| |
score: 154 |
e-value: 2e-35 |
Identity: 37.93% |
Span: 660bp (61.9%) |
Frame: 1 |
| predicted protein [Micromonas sp. RCC299] >gi226517120|gb|ACO63114.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|66824695|ref|XP_645702.1| |
score: 153 |
e-value: 3e-35 |
Identity: 36.74% |
Span: 627bp (58.8%) |
Frame: 1 |
| hypothetical protein DDB_G0271396 [Dictyostelium discoideum AX4] >gi60473889|gb|EAL71828.1| hypothetical protein DDB_... |
| Match: gi|262104361|gb|EEY62413.1| |
score: 150 |
e-value: 2e-34 |
Identity: 37.77% |
Span: 675bp (63.3%) |
Frame: 1 |
| exosome complex exonuclease MTR3-like protein [Phytophthora infestans T30-4] |
| Match: gi|66472734|ref|NP_001018322.1| |
score: 143 |
e-value: 3e-32 |
Identity: 35.29% |
Span: 678bp (63.6%) |
Frame: 1 |
| exosome component 6 [Danio rerio] >gi123905166|sp|Q6P0I8.2|EXOS6_DANRE RecName: Full=Exosome complex exonuclease MTR3... |
| Match: gi|242025392|ref|XP_002433108.1| |
score: 142 |
e-value: 7e-32 |
Identity: 35.04% |
Span: 663bp (62.2%) |
Frame: 1 |
| conserved hypothetical protein [Pediculus humanus corporis] >gi212518649|gb|EEB20370.1| conserved hypothetical protei... |
| Match: gi|213513832|ref|NP_001134673.1| |
score: 141 |
e-value: 1e-31 |
Identity: 35.71% |
Span: 711bp (66.7%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 [Salmo salar] >gi209735138|gb|ACI68438.1| Exosome complex exonuclease MTR3 [Salmo sa... |
| Match: gi|47210411|emb|CAF91679.1| |
score: 141 |
e-value: 1e-31 |
Identity: 37.17% |
Span: 642bp (60.2%) |
Frame: 1 |
| unnamed protein product [Tetraodon nigroviridis] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At4G27490.1 |
score: 368 |
e-value: 4e-102 |
Identity: 72.31% |
Span: 774bp (72.6%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr4:13739967-13741653 FORWARD |
| Match: At3G61620.1 |
score: 109 |
e-value: 2e-24 |
Identity: 31.08% |
Span: 651bp (61.1%) |
Frame: 1 |
| Symbols: RRP41 | RRP41 (Ribosomal RNA Processing 41); 3'-5'-exoribonuclease/ RNA binding | chr3:22812357-22813885 RE... |
| Match: At3G46210.5 |
score: 74.3 |
e-value: 1e-13 |
Identity: 31.53% |
Span: 591bp (55.4%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.4 |
score: 74.3 |
e-value: 1e-13 |
Identity: 31.53% |
Span: 591bp (55.4%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.3 |
score: 74.3 |
e-value: 1e-13 |
Identity: 31.53% |
Span: 591bp (55.4%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.2 |
score: 74.3 |
e-value: 1e-13 |
Identity: 31.53% |
Span: 591bp (55.4%) |
Frame: 1 |
| 3'-5'-exoribonuclease/ RNA binding | chr3:16987945-16989474 REVERSE |
| Match: At3G46210.1 |
score: 74.3 |
e-value: 1e-13 |
Identity: 31.53% |
Span: 591bp (55.4%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein | chr3:16987945-16989474 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q6P0I8 |
score: 143 |
e-value: 2e-33 |
Identity: 35.29% |
Span: 678bp (63.6%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Danio rerio GN=exosc6 PE=2 SV=2 |
| Match: A0RXU1 |
score: 135 |
e-value: 5e-31 |
Identity: 31.56% |
Span: 663bp (62.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Cenarchaeum symbiosum GN=CENSYa_1536 PE=3 SV=1 |
| Match: O26779 |
score: 133 |
e-value: 2e-30 |
Identity: 33.48% |
Span: 651bp (61.1%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Methanobacterium thermoautotrophicum GN=MTH_683 PE=3 SV=1 |
| Match: Q8U0L9 |
score: 130 |
e-value: 2e-29 |
Identity: 35.11% |
Span: 663bp (62.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus furiosus GN=PF1568 PE=3 SV=1 |
| Match: Q28F19 |
score: 129 |
e-value: 3e-29 |
Identity: 37.1% |
Span: 633bp (59.4%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Xenopus tropicalis GN=exosc6 PE=2 SV=1 |
| Match: O59223 |
score: 129 |
e-value: 3e-29 |
Identity: 34.67% |
Span: 663bp (62.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus horikoshii GN=PH1549 PE=3 SV=1 |
| Match: B6YSI2 |
score: 128 |
e-value: 8e-29 |
Identity: 34.47% |
Span: 690bp (64.7%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermococcus onnurineus (strain NA1) GN=TON_0030 PE=3 SV=1 |
| Match: Q9V119 |
score: 128 |
e-value: 8e-29 |
Identity: 34.67% |
Span: 663bp (62.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus abyssi GN=PYRAB06100 PE=1 SV=1 |
| Match: A9A5C9 |
score: 128 |
e-value: 8e-29 |
Identity: 31.06% |
Span: 693bp (65.0%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Nitrosopumilus maritimus (strain SCM1) GN=Nmar_0432 PE=3 SV=1 |
| Match: C5A2B9 |
score: 125 |
e-value: 4e-28 |
Identity: 33.78% |
Span: 663bp (62.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_203... |
| Match: Q5JIR6 |
score: 125 |
e-value: 5e-28 |
Identity: 33.78% |
Span: 663bp (62.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrococcus kodakaraensis GN=TK1634 PE=3 SV=1 |
| Match: A3MUP1 |
score: 124 |
e-value: 9e-28 |
Identity: 32.78% |
Span: 708bp (66.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_0933 PE=3 SV=1 |
| Match: Q4JB27 |
score: 123 |
e-value: 2e-27 |
Identity: 32.76% |
Span: 684bp (64.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus acidocaldarius GN=Saci_0610 PE=3 SV=1 |
| Match: A2BKC0 |
score: 123 |
e-value: 3e-27 |
Identity: 33.03% |
Span: 651bp (61.1%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0571 PE=3 SV=1 |
| Match: Q9UXC2 |
score: 122 |
e-value: 4e-27 |
Identity: 31.69% |
Span: 717bp (67.3%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus solfataricus GN=SSO0735 PE=1 SV=1 |
| Match: Q8ZVM9 |
score: 122 |
e-value: 6e-27 |
Identity: 33.06% |
Span: 708bp (66.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrobaculum aerophilum GN=PAE2207 PE=3 SV=1 |
| Match: B1Y978 |
score: 120 |
e-value: 2e-26 |
Identity: 32.37% |
Span: 708bp (66.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_13... |
| Match: Q975G8 |
score: 120 |
e-value: 2e-26 |
Identity: 32.08% |
Span: 708bp (66.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Sulfolobus tokodaii GN=ST0443 PE=3 SV=1 |
| Match: A1RST0 |
score: 120 |
e-value: 2e-26 |
Identity: 32.19% |
Span: 684bp (64.2%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0836 PE=3 SV=1 |
| Match: A4WM67 |
score: 118 |
e-value: 8e-26 |
Identity: 32.23% |
Span: 708bp (66.4%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1937 PE=3 SV=1 |
| Match: Q97BZ5 |
score: 117 |
e-value: 2e-25 |
Identity: 30.14% |
Span: 645bp (60.5%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermoplasma volcanium GN=TV0310 PE=3 SV=1 |
| Match: Q9HIP2 |
score: 116 |
e-value: 2e-25 |
Identity: 28.31% |
Span: 645bp (60.5%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Thermoplasma acidophilum GN=Ta1293 PE=3 SV=1 |
| Match: Q8TYC1 |
score: 115 |
e-value: 4e-25 |
Identity: 31.67% |
Span: 651bp (61.1%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Methanopyrus kandleri GN=MK0381 PE=3 SV=1 |
| Match: Q9YC03 |
score: 115 |
e-value: 7e-25 |
Identity: 31.36% |
Span: 648bp (60.8%) |
Frame: 1 |
| Probable exosome complex exonuclease 1 OS=Aeropyrum pernix GN=APE_1447 PE=3 SV=1 |
| Match: Q5RKV6 |
score: 114 |
e-value: 1e-24 |
Identity: 34.08% |
Span: 612bp (57.4%) |
Frame: 1 |
| Exosome complex exonuclease MTR3 OS=Homo sapiens GN=EXOSC6 PE=1 SV=1 |
|
| 12 lower scoring hits censored -- only 25 best hits are stored. |
