Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U564446, SGN-U564449, and SGN-U594664 in the current build, Tomato 200607 #2

Unigene SGN-U213028

Unigene Basic Information

Unigene ID:	SGN-U213028
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213028
mRNA sequence:	Length: 1447 bp

>SGN-U213028 Lycopersicon Combined #3 (90 members)
TAAAAAGCTATCAACTTCTCTATTTTGCCTCTATTTGCTGCTGTTAGAAGCATTTTGTACTATAAACTATTTCTCTTTCATTCCTTTCTC
ACTTTTCTTTGCTTTTGGGTTTCTGGTTTATTTTTTCTCTTCTAGTTTTGTTTTGGTTTGATCTGCTTCGTGGGGTTCTTTATATTCTCT
TGAAATCTTGAATTTTGGGTGTTTCTTGAAAATTCAAAGAGATGGAGAGGGACTTTATGGGATTGAATATCAAAGATTCTTTACTTGTAG
TCAAGGATGAACCTGTTGAAAGCTCAAAAGACTCTGGGTTTCGCTGGCCAATGTCGAGCAAGGTTGGTGTACCTCATTTCATGTCCTTGA
ACTCTGCTCAAGATGAGAACACCTTCAAAGCTCTATCTGCCACAGATGGAGTCGATGCTGGTCTCAAACGTCAGCCTGGTGAACTCCAGA
TGAAGCAAGTTCTTGGTGGAATTCCTGTTACAGCTCCTCATTCAATGCTTCCATCGCGTGGCTCTGTGGCTGGAACAACCGAACCTTGGT
TTAATTCCAAGGGTTCTGCAGCACCTGCTCAACTGACCATCTTCTATGGTGGGATGGTCAATGTCTTCGAGGATATCTCCCCTGAGAAGG
CACAGGCTATTATGTTTTTGGCTGGACATGGCTGTGCTCCACCTAATGTGGTGCAGCCAAGGTTTCAACTTCAGGCATCTGCATCGAAAC
CTGCTGCTGCAGATGGTGTTTGTGTGAACCAAACCCCAAACATGCTGCCTGCCTCGGGTCTTTCTAGCCCTATGTCCGTTTCTTCCCATC
CCATTGGTCAATCTGATGGCAGTTCTGGAAACAAAGATGACATGAAGATGTCTAAAACTGCAAACATTTCAGTGACTCCCCATGTCAAAT
TGGACACTTCAAAGATTGTGACATCACTAGGACCTGTTGGGGCGACTACCATAATGACAGCAGCGGTTCCACAAGCTAGGAAAGCATCTT
TGGCTCGTTTTCTGGAGAAGCGCAAGGAAAGGGTGATGAACTTAGCACCATATGGCCTCAGCAAGAAATCGCCTGAGTGCTCCACCCCCG
AGTCTAATGGAGTTGGTTTCTCTGCAACTTCCACTCCTCTGTTAGCCGGTAAGGAGACCTAGCTATGATATCTGAAGACTGCTCAACGCC
GTAAATCAGTGAAGCATTATCTATTTTATTTCAGCAAGTTAAAATCTGTGTAGCTATCAAGTTTTGTTTCTTGTCAACTTTTGTTTAGCT
CTAGCTAGACATCTTAGTATCCAATTGGTTTGGTCTTTTCTTTTTTCTGTAACTTGATGGAATTTATCCCATCCAAATAACTTCTTCAAT
TTGTAACTATTTATTTTGTTACATTGTGTTTCACAAGTATATATATATATATATTAATGTTATTTAGTCAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (22)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	18
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	12
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	5
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	5
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	10
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	cTSD	seed	1504	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (90)

Alignment image suppressed for unigene with 90 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (18)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	240	ATPase_a/bcentre	64
2	22874		18
5	57426		13

Preceding Unigenes (2)

Unigene	Build
SGN-U143560	Lycopersicon Combined #2
SGN-U143562	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Web URL:

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