Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U585413 in the current build, Tomato 200607 #2

Unigene SGN-U214793

Unigene Basic Information

Unigene ID:	SGN-U214793
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	214793
mRNA sequence:	Length: 1286 bp

>SGN-U214793 Lycopersicon Combined #3 (30 members)
TAGATTTCATTTCTTTGTCTTTGTCAAATCCTAGAATCAACCTGATAATATGGCGGGGGAAAAGACTGGAATTGCCAAGGATGTAACTGA
ATTGATAGGTAACACTCCTTTGGTATACCTGAATAATGTTGTGGATGGGTGTGTTGCACGTGTTGCTGCCAAGCTGGAAAGCATGGAGCC
ATGCTCTAGTGTTAAGGATAGGATTGGTTATAGTATGATTACAGATGCTGAGGAGAAGGGCTTAATCAAACCTGGTGAGAGTGTCCTCAT
CGAACCTACAAGTGGAAACACCGGTGTAGGATTGGCATTCATGGCTGCTGCTAAAGGCTACAAACTCATCATTACGATGCCTTCTTCAAT
GAGTCTTGAGAGAAGAATTATTCTGCGTGCTTTCGGTGCTGAGTTGGTGCTTACTGACCCGGCAAAAGGGATGAAAGGTGCAATTTCGAA
GGCCGAAGAGATAAGGGGCAAAACACCTAACTCCTATATTCTTCAGCAATTTGAAAACCCTGCTAACCCAAAGATACACTATGAATCTCC
TGGTCCTGAGATCTGGAAAGGCTCAAACGGGAAAGTGGATGCTCTAGTCTCTGGAATTGGAACAGGAGGCACAATAACAGGTTCAGGCAA
GTATTTGAGAGAGCAGAACCCCAACATCAAGCTGTATGGCGTGGAACCAGTTGAAAGTGCTATCCTTTCTGGTGGAAAGCCTGGTCCACA
TAAGATTCAGGGGATTGGTGCTGGTTTCGTTCCTGGTGTTTTGGAAGTTAACCTTATTGACGATGTAGTTCAGGTTTCAAGTGATGAATC
CATAGAAATGGCTAAGCTTCTGGCATTGAAGGAAGGATTGCTAGTGGGAATATCATCTGGTGCTGCTGCTGCTGCGGCAATTAAAGTTGC
TAAGCGTCCTGAAAATGCTGGGAAGCTCATTGTTGTTGTTTTCCCAAGCTTCGGGGAGCGATATCTTTCCTCTGTGCTCTTCGAAACTGT
CAGACGAGAAGCAGAGAACATGACTGTGGAGCCTTGAACTTTTTGTCCTTCGATTACTACATCATCGTCGCGAATAGGGCTTCTGATGAA
GCAGAATGTTCTTGTCTAAACCTTCCCCTTTCCATTTTGCTGAAACTGCTAGAAAATAAGGCCATCTCTTTCCTTTATTGGCTATGTTCT
TTAAAGTAAAAAAAAAAACCGTTCAAGTATCTTTTAGTGCTTTTGTAATTCTACTGTTTCTACAACATTTGAAAAAAAAAAAAAAAATAA
AAAAAAAAAAAAAAAAAACTCGAGAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (30)

Alignment image suppressed for unigene with 30 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (10)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	199	Cysta_beta_synth Cys_synthM B6_enzyme_beta Cys_synthKM Cys_synthK	74
2	22155	Cysta_beta_synth Cys_synthM B6_enzyme_beta Cys_synthKM Cys_synthase_BS Cys_synthK	52
5	56417	Cysta_beta_synth Cys_synthM B6_enzyme_beta Cys_synthKM Cys_synthase_BS Cys_synthK	45

Preceding Unigenes (1)

Unigene	Build
SGN-U145112	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Web URL:

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