Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U579029 and SGN-U579752 in the current build, Tomato 200607 #2

Unigene SGN-U215132

Unigene Basic Information

Unigene ID:	SGN-U215132
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215132
mRNA sequence:	Length: 1224 bp

>SGN-U215132 Lycopersicon Combined #3 (24 members)
GCACGAGCAAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCT
CCTCCATCTACTGTAACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCA
ATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGC
CTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCG
GTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGACAGGGGATCCTCTGTATGTGCTACTGT
GTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTG
AATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGG
AATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTA
CCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTG
AAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGA
ATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCCACAAACATT
CGGTATAGGAAATCACAGCCACATGTCATGAATGACAAATCTTCTTCGCACAATGTCGCCAACTAATTAAAAAACATTGCATGTGTATGC
TGCCTGCTCTCTTTCTTTTGTGATCAGTCTGCATTTTCTACTTGCACTTGAAAGATATAGTGGCTCTGATTTGTATTCAAAAATTACCTA
TTACTATAACTGTAATGTTAATGACGACAGTCTCAAAACAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTSB	seed	1880	1

mRNA member sequences (24)

Alignment image suppressed for unigene with 24 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	# Members
1.2	3423	5
2	26461	5
5	60468	5

Preceding Unigenes (1)

Unigene	Build
SGN-U145741	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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