Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U565781 in the current build, Tomato 200607 #2

Unigene SGN-U215753

Unigene Basic Information

Unigene ID:	SGN-U215753
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215753
mRNA sequence:	Length: 1581 bp

>SGN-U215753 Lycopersicon Combined #3 (18 members)
AAAAAAGAAAAAGGAGCTGAGTTTTTTTTTAAAGAAAATTCAGCTCATAATCAGAGTTGGCTCTTACAAATTCTTATCCTTTTTTTCACT
AATTAATAAATCCCAAAATTTTTAAATTTTTTTTTTCCCTTGTTATATGATTTGATTTTTGTTATCCTATTACACTTTTAATTGTCTTGA
TAGGTCCCAAGATTCCCCTTTTTTCTTTTCTCTTCAAAAAAGTTTCCCTTTTGAATTCTTGATAACTTTTCAAGAATGTCGATTTGTGAT
GGTGATTTGGTGGATTCCAACAATTCTTTTGCTAAGCAACGTGAAAAGATTATTATTGATACTGATCCTGGTATTGATGACAGTATGACA
ATACTAATGGCATTTCAGACACCAGAAGTTGAGATCATAGGCTTGACTACAATCTTTGGCAACGTTACCACAAAAGATGCTACACGAAAT
GCTTTACTTTTGTGTGAAGCTGCAGGATATCCGGATGTTCCCGTGGCAGAGGGTAGCCCTGAACCTCTAAAGGGAGGGGAACCACGTGTT
GCAGACTTTGTTCATGGCTCAGATGGATTAGGCAACTTATTCTTACCTTCTCCAAACTCAAAGAAAATCGACAAGTCTGCATCTGAATTC
TTGGTGGAAAAAGTTTCTGAATATCCTGGTGAAGTGTCGATACTTGCACTGGGACCATTGACAAACTTGGCGTTGGCTGTCAAGAGGGAC
TCAACCTTTGCAAGCAAGGTGAAGAGAGTGGTTGTTCTCGGTGGTTCCTTCTTTGCTTTAGGAAATGTTAATCCTGCCGCAGAAGCAAAT
ATATATGGGGACCCTGAGGCTGCTGATGTTGTGTTTACATCGGGGGCAAATATTGATGTTGTCGGCATCAACATTACTACTCAAGTCAAA
TTGAAAGATGCTGATCTTGAAGAACTAAAGCAATCCAAAGGAAAATACGCTAAATTTGTGTGCGATATGTGCAAATTTTACCGTGATTGG
CACGTGAAATCAGACGGTGTCTATGGTATTTTCCTACATGATCCTGTTAGCTTTGCTGCACTAGTTTGGCCTGAACTTTTCACCTTCAAG
AAGGGCGTCGTGAGGGTTGAGACACAAGGCATCTGCGTTGGACACACCTTAATGGACCAAGGGCTAAAGAAGTGGAATACGAGCAATCCT
TGGACAGATTATTCCCCGGTTTCAGTTGCGTGGACAGTTGATGTGGACGAAGTTCTGGATTATATAAAGAAAACGTTAATGAAACCGTGA
TTACCATTGGATTTATCGGTCTCTTCCATGTGTGAATCTGCTCGGGAGATCGAGGAACGTCGTGTTTTCTAACATCTATTACAGCAATTG
TTCTTAATCTTCATTTTTCCTCCATTCCTTGCAACTAAATAAACCTCAGTTCTGAGAATTATGTAAAGGGCTTATAAAATAGGGTATTAT
AAAGTTATACTTCCTTCCATTTTCTTTTCTTTATTTTTTGGTTCGGATCGATATTTTCACTCCTTTGCTATTGACCTCATGTTTAACCAG
AGGTTTCTAGTTCGAGCTATATAAACAACGAAATTCTTGGTATATACTATA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTSC	seed	2256	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (1)

Expression Data (2)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	591	I/U_NHdlase	31
2	22884	I/U_NHdlase Gid	18
5	59371	I/U_NHdlase UBA_domain Gid	6

Preceding Unigenes (1)

Unigene	Build
SGN-U146166	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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