Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U575884 in the current build, Tomato 200607 #2

Unigene SGN-U215803

Unigene Basic Information

Unigene ID:	SGN-U215803
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	215803
mRNA sequence:	Length: 1496 bp

>SGN-U215803 Lycopersicon Combined #3 (21 members)
TAGGGTTTTTCGCTCTCGCGCTCTGCAACCTAAACCCCCCATTTTCAAATCTCAGTTCTTCGTCTTCCAATACATCCAGGGCTGAGAGAG
AGAATGAGTACAGCAGTGCGAACCCCGAAAACTGGAAGACAATCACTGTTCTTCCAGGATTTAGCTACACCTATTTCTTCCCGGAAATCT
GGGTCGAAATTCAATACACCAGGTCAGGCAGCAGCTGTTTCTGCTTTATGGCGTGAGAATTTTGCCAGTTCAGATCTGCCACCACCGCCT
GTATTTACCCTTGAAGATCGATCGGATGTCTCTCCGGAATCGGGGATTCCTGAATATATTACTTCGCCAGAAATCAAGTCGGACCCTAGA
ACGCCGGTGCTTAATTCAGGACGGGAATTTTCAACACCTAAGAGTAAGTCTGAGGCAAGTACTTCATATGCACTGATGGGTAAGCAGCAG
CAACAGAGTAAACAAAGCCCCTTGCCAAGTTTGACATGGTGGTCACCTGCAAAGGGTAGTGGTAGTGCTGAGCAGGATGACAAGGACAAA
GGTTCGCCAGTAGAAGGCGTCGTACATCCTGGTGCTTTGATAACCTTACCTCCACCAAGGGAAGTTGCAAGGCCAGAGATCAGGAAGAAC
TCAATCCCTGTGGGAAACCTTAATGAGGAAGAATGGGTCACAGTTTATGGGTTTTCCCCAATTGACACCAATTCAGTTTTACGGGAATTT
GAGAAATGTGGTGTCATTTTGAAACACATTCTGGGCCCCCGAGATGCTAATTGGATGCACATTCTCTATCAGAATCGTGCTGATGCTCAA
AAAGCTCTTAACAAGAACGGTATGCAGATAAATGGAGTTCTTATGATTGGGGTTAAACCAGTGGATCCAACACAACGTCAGGCACTGGAT
GATAGGCTCAACAAGCAGGGATTTATACCTTTACCGCATGCTCCAACCAGTAAAAGCAATGACCCGACTCCATTTAGAACCTCCTCTCAA
CCTTGTTATCTCCAAAATGGCAGCAATAGTGCAAAGCAATCATCTGGATCCGTTGCCACCCCAGCGAGATCCGTTGTGTCTAAAATTGTC
GACTTAATGTTTGGTGTCTAATCTTCCATGCTTCGTTTTGTTCTTCCTCCCATGCTTTTGTGTTATTTCTACTCAATGATGTCAAATATC
AAAGTTGATTCATCCGAATGCATATTGATTCCAAACAACAGTAGAGTCATGAGTCTTGATTTGTGCTCCCTTCCCTCCTTTGTCTTCTCT
GTTTGTCCTCTGAATGCATGTTCATGGTGTATTTGTATCGATGTGAACAAAGATTAATCCTGTCATATTTTGAAGAAAAGAGACGGTGTT
GTAATGCAGATATAGAGAAATTTACATTTCCTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAACGGGGGGGGGGGCCCCCCCCCCCCCCCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	cTSB	seed	1880	2
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2975	MPPN	6
2	25724	MPPN	6
5	61347	MPPN	4

Preceding Unigenes (1)

Unigene	Build
SGN-U146312	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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