Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U577687 and SGN-U580616 in the current build, Tomato 200607 #2

Unigene SGN-U216624

Unigene Basic Information

Unigene ID:	SGN-U216624
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	216624
mRNA sequence:	Length: 1347 bp

>SGN-U216624 Lycopersicon Combined #3 (16 members)
AACGCCGACGATCGGAGATGGCGCGAAGAATAGCGATCCACTGGTTCGCGCTCACAGTTACTATCGTGCTCTCCCTTCTTGTTCAGCCTT
CTTTCTCCATATACTGTGACGAAGATGACTGTTACGATCTCCTTGGGGTCACTCAAAATGCCAATTCTTCTGAAATCAAGAAAGCTTATT
ACAAGCTCTCTCTAAAACATCATCCAGATAAAAACCCTGATCCAGAATCAAAGAAGCTTTTTGTGAAAATTGCAAATGCTTATGAGATTT
TGAAAAACGAAGCCACAAGGGAGCAGTATGATTATGCACTTGCCCATCCAGAGGAGTTTTTCTACAATACAGCACGGTATTACCATGCTT
ACTATGGTCACAAAACGGATACCCGTGCTGTCCTCGTTGGTCTTCTTTTGATAGTCTCAATATTTCAGTATCTGAATCAGTGGACAAGAT
ATAATCAGGCTATTGACATGGTCAAGAAAACACCAGCTTATAAAAACAAGCTACGTGCTTTGGAGCTTCAACGCACTGGAGGAATGACTA
ATAGGAAGAAGGGCAACAAGCCGATGGACAAGAAGGTGGAAGAAGAACTTGGCAAGGAACTCAACTTGGACATAAAGGGCACCGAAAAGC
CTTCTGTTTGGGAACTAATTGGAATCCGTTTTATACTTCTTCCTTACACTCTGGGAAAGCTGTTACTGTGGTATGGATGCTGGTTCTGGA
GGTACAATGTCAAGCATGCTCCATATTCATGGGAAGATGCCTCCTATTTGACACGAAGGTCACTTCGGGCTTCTCTTGATTCATGGATAT
CTATTGACGAATCAACCAAGGAAGATCTTATTGAAAGACGGCTTTGGGAGAAGTCCAACTTTGAAAGCTATGTGGCTGAGATGCGCAAGG
AATCAAAGCGCCGAAGATAAAAAGTTTTTGGTTTTACTCAAAGCTATGTGTAGGATGAGAACAGTTTTGATGGGGGAGTATTCTGAGACA
TGAAGCAGGAAGTCTAATGTTTAAATTATTGAAGAAAGCAAAATTATTTTGACAAGGAGAGCTATTGAATTGATAAGTATGTCATAGAAC
TCGGATTTTCACGGTCAGTGTCATAGCTATATTAATAATACTATACAAAAAACATATTGAGACAGATACAAGCATATTGCATTTGGAGCA
ATTTTGGGGGACGAGTGCTGCTCCCCACTTGCTGTTGTAATGCTAGGTTAGAATGTGTTGAAGCATCTATATGTTCTGAAAAGACAGGAA
CTCTGTTCCATATAATGAACTTCATACTTGGCTATGTTGTATTTGTATGTACCATAGTCTTAACTGGTCAACTGTGAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	9	DnaJ_N	612
2	26877	Hsp_DnaJ DnaJ_N	4
5	62924	Hsp_DnaJ DnaJ_N	3

Preceding Unigenes (1)

Unigene	Build
SGN-U146689	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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