Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U582039 in the current build, Tomato 200607 #2

Unigene SGN-U216947

Unigene Basic Information

Unigene ID:	SGN-U216947
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	216947
mRNA sequence:	Length: 1456 bp

>SGN-U216947 Lycopersicon Combined #3 (15 members)
CTCCGCCTCCCACCACCGTCTAATTTGTAAATATATTCGCCGGAAACTTCTCTATCCACGCTTTCTCTATATCTATCATACCCTTTTTCT
TAATTAATCGGTTGCTATTCCTTTGATGGCAGCGATTACGCAGAGAAAAGATTCGGATCGGATCAAAGGTCCATGGAGTCCTGAAGAGGA
CGAGTTGTTGCAGACGCTTGTTGAGAAACATGGACCTAGAAACTGGACTTTGATAAGCAAATCGGTGCCGGGTCGATCTGGTAAATCCTG
TCGTCTCCGGTGGTGTAATCAGCTTTCACCTCAAGTGGAACATCGTGCTTTTACTCCTGAAGAAGATGATACGATCATCAGGGCTCATGC
CAAGTTTGGTAATAAATGGGCGACTATTGCCCGTTTGTTATCGGGTCGGACTGATAACGCTATAAAGAACCATTGGAACTCTACTCTTAA
ACGTAAGTGTCCTTCCATGTCCGAAGATTTAAGCTTTGAAACCCCTCAACCGCCTTTGAAAAGATCGTCTAGTGTTGGTCCCTGTACCAA
TTTTTCTTCTGTTATGAATCCGGGTAGTCCGTCTGGATCCGACTTGAGTGATTCTAGTCTTTCGGGTTTTCCCCAATCGCATGTTTACAG
ACCTGTTCCCCGTACCGGCGGGATTTTCCCTCTTCCTCCTCCTCCTCCGGTTAAGCAGATCGAAATTCCTCCATCTGTACCCGACCCACC
AACATCTCTCTGCCTTTCGTTACCCGGATCCGGATCCGGATCCATCGAAAAGCCAACCCAGTCCCCTAAATCACCACCACTACCACCGCC
TCCTTTGCCGGCGGTTGATAAACCGATTCCCCCATCCGTACCCGTAACTTGTCCACCATCGGCTTTCATGGGTCATCTTGCTCAATCTAA
TCAAAGTTATGATTTTAGTGCTGCACCCAAATCAGGAGAGAAACAGTTTTTTACTCCAGAGTTCTTATCAGTTCTGCAAGATATGATTAG
AAAGGAAGTTAAGAGTTACATGTCTGGGTTTGAACAAAATGGTCTCTGCATGCAGACTGATGCAATAAGGAATGCAGTCATTAAGCGTAT
TGGCATCAGCAAGATTGAGTAATCCATCTATGATTACTGTTGAACTGTTCTATAGTCATCAACAATGGCTGCCGCTGCTCAGCGAAATGA
CACCGGAGAAGAAACAATGGAAGATCGGAGCAGTCTTCCTCCCCCTTTTTTTTATTGCTTAATTACTTCCTTAGAATTCCAATCAAAAAA
AATAATTTTGCAGTAATGTACAGATGAATGAGAGGATGAGAGAAGAAAACTAAATTTAAAAATGCCCGAAAAGATGAAAAAATTGAGAAA
AATCTCATTCTCTTGTCTAATGTCGCATGATGATCTCGCTTCGATAGCGTTGCAAGAACAGGCTCATGAAAATTAATCTATGAATTAGGA
AATTTTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 3 | blast: 2 | go: 2 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	27	Myb_DNA_binding	304
2	21986	Myb_DNA_binding	272
5	56260	Myb_DNA_binding	262

Preceding Unigenes (1)

Unigene	Build
SGN-U147008	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
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