Sol Genomics Network

Unigene SGN-U270415

Unigene Basic Information

Unigene ID:	SGN-U270415
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270415
mRNA sequence:	Length: 2151 bp

>SGN-U270415 Solanum tuberosum #4 (20 members)
CTTTTTCCCTTTTTGGCCTTAAATCAGTACTTCTATCTGTTCAATTCAACACAGCTCCAATTCATATTCTTCTCCTAATCGTCTCGTCTC
GAAAGAGTGAAATTTATTCAGAGATGGCTTCGTCTGCTTTAATTAGCGATACTGAGTCCTGGAAGGATTTGCGAGCTCATGTTGAAGAAA
TTAACAAAACTCATTTACGTGATTTGATGAATAACACTAATCGATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGATCGATTACT
CGAGACAAAGAGCCACCCTTGATACATTGAATAAGCTCTTCAGTTTAGCTGAGGCAGCACGTGTTAAGGAGAAGATCATTCGGATGTTCA
ATGGAGAGCATATAAACAGCACAGAAAACAGATCTGTTCTTCATGTTGCACTGCGTGCTCCTAGGGATGCAGTCATAAATAGTGACGGGA
AGAATGTTGTCCCTGAGGTTTGGCACGTACTTGATAAGATCCGAGACTTCTCTGAGAGGGTTCGCAGTGGTGCCTGGGTTGGAGCCACAG
GAAAAACACTGAAAGATGTTGTAGCTGTTGGTATAGGTGGCAGTTTCTTAGGCCCTTTGTTCGTACACACAGCACTTCAAACAGAAGCGG
AGGCTAGTGAGTGTGCAAGAGGGCGCCAGTTGCGATTTCTTGCAAATGTTGATCCCATTGATGTAGCCCGAAATATAACAGGCTTGAATC
CTGAAACAACTCTAGTTGTGGTGGTCTCGAAGACTTTTACTACTGCCGAGACAATGCTAAATGCCCGTACAATGAGGGAATGGATCTCCT
CTGCATTAGGACCTCAGGCAGTTGCAAAGCATATGGTTGCAGTTAGTACCAATCTTAAGCTCGTAGAACAATTTGGCATCGATCCAAATA
ATGCATTCGCTTTCTGGGACTGGGTAGGAGGTCGATATAGTGTCTGCAGCGCAGTTGGAGTATTGCCTCTTTCTCTGCAATATGGATTTT
CCATTGTTGAGAAATTTCTGAAGGGAGCTTCGAGTGTTGATCAGCATTTCCTCTCAGCACCATTTGAGAAAAATATACCTGTGCTTTTAG
GCTTGCTGAGTGTGTGGAATGTTTCATTCCTTGGATATCCAGCAAGAGCAATATTACCCTATTCTCAAGCACTGGAGAAGTTGGCACCTC
ATATTCAACAGGTCAGTATGGAGAGTAATGGGAAAGGGGTGTCTATTGATGGTGTCCCTCTTCCTTACCAGACTGGTGAAATTGACTTTG
GTGAACCAGGGACGAATGGCCAACACAGCTTTTACCAATTAATTCATCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTTAAGA
GTCAGCAACCTATTTACCTGAAAGATGAAGTGGTGAATAACCATGATGAGCTCATGTCGAACTTCTTTGCGCAGCCAGATGCCCTTGCTT
ATGGGAAGACACCAGAGCAGTTGCAAAAGGAGAATATTCCTGAGCATCTTGTTTCTCATAAGACATTTTCTGGAAATCGACCTTCTCTAA
GTATACTACTTCCATCATTGAATGCTTACAACATTGGACAGTTACTGGCCATCTACGAGCACAGAGTTGCAGTCCAAGGCTTTGTATGGT
GTATCAATTCTTTTGATCAGTGGGGTGTGGAGCTAGGAAAGTCTCTAGCGACTCAAGTTAGAAAGCAACTTCATGCATCTCGTAAGAAAG
GAGAATCAGTTGAAGGCTTCAATTTCAGCACCAAAACGTTGATAACAAGATATCTCGAGGCAAGTGCTGATGTTCCTTCTGATCCTTCAA
CTCTTCTACCAAATATATGAGGAATGTTAAGAATGGGGTTTGATGACCACGGTTTAACGGAAGCCTCAACTTCACTACCAAGCAAAATGA
ACAAATTTTAATCAATTAGTTTTGAAGTTTACATAAAAGATTTGGTGTTGTATGGTCACTCATCTTGGCAAACATATCGCTGCAGTTGTA
TCAATAAAATTCAAAGCATTTATTTGTGGTTTCATTTGTAAAAATAATGGTCTTTTAACTTGGAAGTCGGTGTCAGTTTGTGAAAGTGAA
CAAAGTATTAACCTGATTGTGAAAAAAATAATTTTCTATTGAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
gpi	glucose-6-phosphate isomerase

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	6
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	3
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1427	G6P_Isomerase	13
2	25384	G6P_Isomerase	6
5	59403	G6P_Isomerase	6
1.1	102715	Phosphoglucose isomerase (PGI) - Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347) - Biological Process: gluconeogenesis (GO:0006094) - Biological Process: glycolysis (GO:0006096)	11
2	121903	Phosphoglucose isomerase (PGI) - Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347) - Biological Process: gluconeogenesis (GO:0006094) - Biological Process: glycolysis (GO:0006096)	6
5	132104	Phosphoglucose isomerase (PGI) - Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347) - Biological Process: gluconeogenesis (GO:0006094) - Biological Process: glycolysis (GO:0006096)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U244929	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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