Sol Genomics Network

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Unigene SGN-U271160

Unigene Basic Information

Unigene ID:	SGN-U271160
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271160
mRNA sequence:	Length: 959 bp

>SGN-U271160 Solanum tuberosum #4 (9 members)
GATGAATCCATCTGTCATCAAGCGTGGGCGGGTGGAGATTGGTCTTTGATCAGCAATGTTCTATCTCCTTGGTATGGAATTGACAATAAA
ACAAAGTAAATAAAGAGTCATTCTGAACATTCTCTGATTAACGAAATAACTTTGGCGATTAAGCTGTGTTGTCTGTAGCCCTATGCTTTG
AGTAGGCTGATGTGTTTCTCAACTTGATGGCTTTGAAGATGAATTTCTTTGTCTTTGTTCCGAAATTCATAGTTGAAACTTGCTTCTGAA
GTATCGAACATCAGTCAAAATGTCTCGGAAAGGATTGATGGAGCAAGATCTAAGCAAATTGGATGTGACAAAGCTACATCCGCTTTCGCC
TGAAGTTATTGCTCGTCAGGCAACAATAAACATTGGTACTATTGGCCATGTGGCTCATGGGAAGTCAACAGTTGTAAAAGCTATATCTGG
TGTGCAGACTGTTCGTTTTAAAAATGAGCTAGAGCGTAATATTACAATTAAGCTTGGATATGCAAATGCTAAGATATACAAATGTGAAGA
AGAGCGCTGTCCTAGACCTGCATGCTACAAGGCTTATGGAAGTGGAAAAGAAGACAATCCCATGTGTGACGTCCCTGGTTTTGAGAACTG
CAAAATGAAATTGCTGAGGCATGTGTCTTTTGTTGATTGCCCGGGTCATGATATTCTCATGGCTACTATGCTTAATGGAGCCGCAATTAT
GGATGGCGCCTTACTTCTAATTGCTGCCAATGAGAGCTGTCCCCAACCTCAAACTTCTGAACATTTAGCTGCTGTAGAAATTATGCGTCT
CCAACATATAATAATTCTTCAAAATTAGGTTGATCTGGTTCAAGAAAATGTTGCTATCAACCAGCATGAGGCAATTCAAAAATTTATTCA
GGGAACTGTTGCAGAATGTGCCCCAGTTGTACCAATATCTGCACAATTAAAGTACACAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	50	ProtSyn_GTPbind	231
2	22673	Ribosomal_S6 ProtSyn_GTPbind	22
5	56813	Ribosomal_S6 ProtSyn_GTPbind	22
1.1	101378	Heavy metal transport/detoxification protein - Biological Process: metal ion transport (GO:0030001) - Molecular Function: metal ion binding (GO:0046872)	495
2	119214	Protein synthesis factor GTP-binding - Molecular Function: GTP binding (GO:0005525) - Biological Process: protein biosynthesis (GO:0006412)	18
5	129563	Protein synthesis factor GTP-binding - Molecular Function: GTP binding (GO:0005525) - Biological Process: protein biosynthesis (GO:0006412)	18

Preceding Unigenes (1)

Unigene	Build
SGN-U245061	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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