Sol Genomics Network

Unigene SGN-U271403

Unigene Basic Information

Unigene ID:	SGN-U271403
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271403
mRNA sequence:	Length: 589 bp

>SGN-U271403 Solanum tuberosum #4 (13 members)
GTTTGGTAAGCTAATTTTTGCGAAGCCCATAGAAAAAAGAACAACTCAGAGAAATGGCAGAGGAGGGACAAGTCTTTGGCGTCCACGCCG
TTGATGAATGGAACCAACATCTCCAAAAAGGAATTGATAACAAAAAACTGATAGTTGTGGACTTTACTGCTTCCTGGTGTGGTCCCTGCA
AGTTCATTGCTCCATTCCTTGCAGAGTTGGCCAAGAAGATACCCACTGTTACCTTCCTGAAGGTGGATGTGGATGAATTGAAGTCTGTAG
CTACTGATTGGGCCGTGGAGGCGATGCCAACCTTCATGTTCATCAAGGAGGGGAAGATCGTTGATAAGGTGGTGGGAGCCAAAAAAGATG
AGCTGCAGCAGACCATTGCCAAGCACATCAGTAGTACTTCATCAGCCTAATTAATATGTTTTACTCCATATTATATTGCACTTGGTTGAG
TGGCATCTATCTTAATATGAGCAAGAATTAATTTAATTTTCGTTGGATATTGCAAGTTCTTACTATTAAGTCAAATATTATTCTGCAGTT
TGAACCATTCCGTATCTAATCAAAAAATGATTTCTTGCGCTGAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	TBSK	Tuber Skin	4812	3
Solanum tuberosum	TUBS	Tubers	5976	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1

mRNA member sequences (13)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	39	Thiored Thioredox_dom2	262
2	22137	Thioredoxin Thiored Thioredox_dom2 Disulph_isom	56
5	56431	Thioredoxin Thiored Thioredox_dom2 Disulph_isom	43
1.1	101384	Thioredoxin-like fold	404
2	118571	Thioredoxin fold Thioredoxin-related - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) Thioredoxin domain 2 - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) Thioredoxin domain Thioredoxin-like fold	51
5	129154	Thioredoxin fold Thioredoxin-related - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) Thioredoxin domain 2 - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) Thioredoxin domain Thioredoxin-like fold	35

Preceding Unigenes (1)

Unigene	Build
SGN-U246855	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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