Sol Genomics Network

Unigene SGN-U272367

Unigene Basic Information

Unigene ID:	SGN-U272367
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272367
mRNA sequence:	Length: 971 bp

>SGN-U272367 Solanum tuberosum #4 (11 members)
AACTCCTCCTCCACAGAGGAACAAAATAATAAGTGACTAATATATTTTGATTTGATTCGATTCGATTCCCATTTTGCAGTGTCAAATCTA
CAATATCTCATTCAAATGCTCGGCGGTTCAATCTCCGGTGGCCGTACTAACGTCCGTGTCGTCGTCGTCGGCGACCGTGCTACTGGCAAA
TCAAGCCTCATTACAGCTGCCGCTAGTGAAACTTTTCCGGAAGAAGTTCCACCGGTGCTTCCTCCAACTCGACTTCCTGCCGATCTCTAT
CCTGATAATGTTCCTGTTACGATCATTGATACTTCCTCAAGTTTGGAGAGCAGAGGTAAGGTTGCTGAAGAATTGAAGCGAGCCGATGCT
GTTGTCCTTACCTATGCTTGCGATCAGCCTTCTACACTCAATCGCTTGACTACTTTCTGGCTTTATGAGTTCCGTCGCTTAGAGATCAAG
GTGCCGGTAATTGTTGTTGGCTGTAAGCTAGATAAGCGAGATGAGGAGCATCATATGAATCTTGAGCAAGTGATGGCTCCAATCATGCAA
CAGTTCCGTGAGATTGAGACTTGCATAGAATGTTCTGCTGCAAACCTAGTTCAGGTACCTGAAGTGTTCTATTATGCTCAGAAAGCTGTA
CTTCATCCAACAGCTCCACTCTTTGATCATGAAACTCAGGCTCTTAAACCCCGTTGTGTTAGAGCACTGAAACGGATATTTATTCTTTGT
GATCATGACATGGATGACGCTCTCAATGATGAAGAGCTTAATGAGTTTCAGATTAAGTGCTTCAATGCTCCCCTGCAGCCTGCTGAGATA
GTGGGTGTCAAAAGAGTAGTACAGGAGAAGCTACCTCAAGGTGTAAATGACCTGNGCCTTACATTGACAGGGTTTCTTTTTCTTCATGCA
CTTTTTATAGAGAAGGGTCGACTTGAGACCACTTGGACTGTGTTAAGGAAATTTGGGTACAATGATGAAAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	4
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	978	Small_GTP Ras_trnsfrmng EF-hand	19
2	23032	Small_GTP Ras_trnsfrmng EF-hand	16
5	57121	Small_GTP Ras_trnsfrmng EF-hand	16
1.1	101377	Ras GTPase - Molecular Function: GTP binding (GO:0005525) - Biological Process: small GTPase mediated signal transduction (GO:0007264)	504
2	119599	EF hand associated type-2 Miro-like EF hand associated type-1 EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	14
5	129926	EF hand associated type-2 Miro-like EF hand associated type-1 EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	14

Preceding Unigenes (1)

Unigene	Build
SGN-U245911	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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