Sol Genomics Network

Unigene SGN-U273293

Unigene Basic Information

Unigene ID:	SGN-U273293
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273293
mRNA sequence:	Length: 1667 bp

>SGN-U273293 Solanum tuberosum #4 (9 members)
GGAACACACGAGTCTATTGATCCATTATCGATCCAAATGAGTGCAAGTGAAGGGAGCTCCGGCTCATCGGCTGCCGCCGCCGTCGAAGTA
CCGGTGGTATCAACGGAGAAGAAGAAGGAAAAGTCAAGAGTGAGCAAGACATCGCAAATACTGTGGCACGCTCATCATAACGATGCCGCT
GCCGTACGGAAGCTACTAGAAGAAGATCGGACGCTTGTTCAAGCTAGAGATTACGATAATCGAACTCCACTCCACGTTGCAGCGTTACAT
GGCTGGATCGATGTTGCAAAGTGCTTGATTGACTATGGCGCCGATGTCAACGCTCAGGATCGTTGGAGAAACACGCCTCTAGCCGATGCA
GAAGGCGCTAAGAAATCTGCCATGATTGAATTGTTAAAGACATATGGCGGGCTATCTTATGGACAAAATGGAAGCCATTTTGAACCAAGG
CCTGTCGCCCCACCTCTACCAAAGAAGTGTGATTGGGAGATTGATCCTACTGAGCTGGACTTCTCAAATTCTGCAATCATTGGAAAGGGG
TCTTTTGGTGAGATCTTAAAAGCTTGCTGGCGTGGAACACCTGTAGCTGTTAAACGCATCCTCCCAAACCTTTCAGATGATCGATTGGTG
ATTCAAGATTTCAGGCATGAGGTAAATTTGCTGGTGAAGCTCCGTCATCCAAATATAGTGCAATTTCTTGGAGCTGTTACTGAGAAAAAA
CCCTTAATGTTAATAACTGAATACTTGAGAGGGGGCGATCTGCATCAGCACCTCAAGGAAAAAGGTGCTCTTACACCATCTACAGCAATC
AATTTTGCTATGGATATAGCAAGAGGCATGACTTATCTTCACAATGAGCCAAATGTTATAATCCACAGAGATCTAAAGCCCAGGAATGTT
CTTCTAGTCAATTCCAATGCAGACCATTTGAAAGTTGGAGATTTTGGATTAAGCAAACTAATCAGGGTTCAGAACTCCCATGATGTTTAT
AAAATGACTGGGGAGACAGGGAGCTACCGCTATATGGCACCTGAAGTTTTCAAGCACCGGAAGTATGACAAGAAGGTTGATGTTTTCTCT
TTCGCAATGATCTTATATGAGATGCTAGAGGGTGATCCACCATTATCCCACTATGAACCATATGAAGCAGCCAAGTATGTGGCAGAAGGA
CACAGGCCTATGTTCAGGGCAAAAGGTTTTACCCCAGAATTGAAAGAGTTGGTAGAGGAATGTTGGGCACCAGATATGAACAAGAGACCC
TCATTTTTGGATATTCTAAAAAGACTTGAAAAAATTAAAGATGCTCTACCCTCGGAGCATCATTGGCACCTTTTCACTTCATGACATCAA
ATTCCAGAGCTGACCAGATATTTCGTTGAATTCTCCTATCAAACGCACTATTTGAAATTGATATGATTGTCGGATTGTGCATAGGATCAA
CTGGCAAAGGTCTGCAAAAACTGTTGCTGTACCAATTCTTTATGCCCCATTCAACATTCCAGCTATGCTTGTTGTAGATTTTATCAAGAT
ATTTCCACAAAATATCAAGTAGAACTGTGTGTCGAGAGATTTGTAACGAAATTTCTTACATTTGCTTCTTTTTTAAAATGTGATTCCCAG
TGGTATTGAAGTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	22004	Prot_kinase	166
5	58553	ANK Tyr_pkinase Prot_kinase Ser_thr_pkin_AS	8
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118442	Tyrosine protein kinase - Molecular Function: protein-tyrosine kinase activity (GO:0004713) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	149
5	131634	Tyrosine protein kinase - Molecular Function: protein-tyrosine kinase activity (GO:0004713) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Ankyrin Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U246772	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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