Sol Genomics Network

Unigene SGN-U273296

Unigene Basic Information

Unigene ID:	SGN-U273296
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273296
mRNA sequence:	Length: 1489 bp

>SGN-U273296 Solanum tuberosum #4 (9 members)
GTTATTACAGAGAGCAACTTGATCTGCATATTCTACACTGAATTCTGCTAAATACCAGCTTCCTCTCAATCCCCGCGTTAATAATTGAAG
TATATCAACCGTTCACATTCTCTCCCGTCTTCTTCGCCCTACCACAGACATTTACAGAGGTAGTAGTAGTAGTACCTTTCAATAGAGAAG
GAGAAGGAGAAAACAGAGGAATCAAGATCCAAAAAACCCAAAAAAATGGGGTCTCTTCCACCACCATATCAGGACTTCTTTCATCACTCG
GCAAAGCAAGATTCAATTGACCCAGATCAACTTCTTAAACTCTTCAAAGCCCAGCAGAATTATCTCAATCATTTCTTTCAAAATCTTGAT
CTTTCCCAAACTCTTAGTTTTACCCAAACTCTCCTTAATGCCAAAGGTACCATTTACTTTACTGGTGTTGGGAAATCTGGGTTTGTTTCC
CAGAAAATCTCACAGACCCTTGTTTCTCTCGGTATCAAATCTGGGTTTTTATCCCCTGTTGATGCCCTTCATGGAGACATTGGCATTTTG
GATCCACAAGATGTTTTGGTTATGTTTAGCAAGAGTGGGAATACGGAAGAATTGTTAAAGCTTGTGCCTTGTGCAAAGGCGAAACGGGTC
TTTTTGATTTCGGTTACTTCGGTAAAGCCTAATTCTTTGATGGGTGTGTGTGATCTGAATGTGCATTTGCCTCTAGAGAGAGAATTATGC
CCTTTTGATTTGGCACCTGTGACGTCTACTGCAATTCAGATGGTGTTTGGAGATACCGTGGCGATTGCTTTGATGGGGGCGAGGAACTTG
AGCCGGGAGGAGTATGCTGCCAATCACCCTGCTGGGAGGATCGGGAAAAGTTTGATCTTCAAGGTTAGAGATGTGATGAAGAAGAAAGAA
GATCTTCCAATTTGCAAGGAAGGAGATCTTATTATGGATCAACTTGTAGAGCTGACAAGCAAAGGATGCGGGTGCCTTCTTGTTATTGAT
GAGGAGTTTCATCTGCTCGGCACATTCACTGATGGTGATTTACGTCGGACATTGAAAGCCAGTGGAGAAGGAATCTTCAAGCTTACAGTT
GGAGAAATGTGTAACAGGAAACCAAGGACAATTGGTCCAGATGCTATGGCAGCTGATGCAATGCAGAAAATGGAATCTCCACCATCTCCA
GTCCAGTTCTTGCCAGTTATTGATCAAGATAATGTGTTGATTGGTATTGTTACCTTACATGGACTGGTCTCAGCAGGCTTGTGAAGTTCT
TGCCATTATCATTAATTCTTTTTGTATATTGTTGGGTTTCTTACCCTATTTTCTTCAGCTGATGTTATTTTATTCCTATAGCAATGATGA
ATATTGGTAGTAAAATATTATAGTCATGTTATTGGACTTATAGATTGGGCAAGAGCTCTGTACCCTTCATCATTTGTGCCCTGTTACAAT
GTACAACGAGGGAGAATGTGATAATGATGGGCATCTATTCATTATAGTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2230	GmhA SIS CBS_domain ProV KpsF	8
2	24481	GmhA SIS CBS_domain ProV KpsF	8
5	58513	GmhA SIS CBS_domain ProV KpsF	8
1.1	103315	KpsF/GutQ Sugar isomerase (SIS) - Molecular Function: sugar binding (GO:0005529) - Biological Process: carbohydrate metabolism (GO:0005975) CBS	7
2	121189	CBS KpsF/GutQ Sugar isomerase (SIS) - Molecular Function: sugar binding (GO:0005529) - Biological Process: carbohydrate metabolism (GO:0005975)	7
5	131432	CBS KpsF/GutQ Sugar isomerase (SIS) - Molecular Function: sugar binding (GO:0005529) - Biological Process: carbohydrate metabolism (GO:0005975)	7

Preceding Unigenes (1)

Unigene	Build
SGN-U246601	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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