Sol Genomics Network

Unigene SGN-U274106

Unigene Basic Information

Unigene ID:	SGN-U274106
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	274106
mRNA sequence:	Length: 1604 bp

>SGN-U274106 Solanum tuberosum #4 (7 members)
CTTCTTTCTTTGACCAAAGAAAAACTGTATCATCAAAAAAATACTCTCTTTTTTTGCCCCTTTTCTTCTTTGTAATTGACCATCAAGATC
CAGCATTTGATATCCTCAACTGGGTTCCTTACATTTTGCTTCTTAACTCGGGAGAAATTGGATTTGTTCTTGCAATGGATTTTTCGGGGT
TGCAAACTAGTCTATAGAGATCTTAAATGTTTCAGTCAACTACTTAATTAGGACCTTCGATTGTTGCGGTTATGACTGGGCCTCTCACCA
AGATGGCTTTGGATAACAGAGCTCTTACTACCTTTGCTGCTATTTTGATCTACTTGGTCTTGAGCTGTGCTGTTTGCTCTGCTCTTCAAA
GCGACATTGACTGTCTGAAATCTATAAAAGATTCATTTGAAGATCCATTGAAGTTCTTGAACACAACATGGAAGTTCGATAATCAGACCG
AAGGTTTCATCTGCAAGTTTGCTGGGATTCAGTGCTGGCATCCTGATGAAACCAGGGTTCTGAGTATCAGTCTTCCTGACATGGGTCTCA
AGGGCAAGTTTCCACGTGGTCTTCAGAATTGCACCTCTATTACATCATTAGATCTTTCGAGCAACAATCTCCATGGAACTATTCCAAATG
ATATCTCCAATATTATAGGTTTTGTGGTAACGCTGGATCTCTCATCCAACAATCTATCAGGGGATATCCCAGTTAATCTTGCAAACTGCT
CTTTTTGAATAGCCTTAGACTTGACAACAACCAGTTTACGGGTCAAATTCCTCCAGAAATTGCCTTGCTTGGTCGGCTCAAGAATTTTAA
TGTAGCAAACAATCAATTGTTCGGACCAGTCCCACATTTCATAAATTCAACTTTTCCTGCAGAGAGCTATGCCAATAATGCCGGACTGTG
TGGATCACCATTACCTCTTTGTAAGGGTTATGCTAAGAAACCCCCTACTGGAATCATTGTTGGTGCAGCTGTTGGTGGGGTGACTTTAGG
TGCTGTATTATTGACCATTGGTATGTTCTTCTATATGAGAAAGATATCCAGGAAGAGGAAAAAGGAAGATGATCCTGAAGGGAATAAATG
GGCGAAGAGTATTAAGGGTTCCAAGGCAATCCAGCTTTCAATGTTTGAGAAATCTACTTCAAAAATGAGATTAAGTGATCTCATGAAGGC
CACCAACAACTTCAGCAAGAACAATATTATTGGGTCAGGAAGAACCGGGACATTCTACAAAGCAGTACTTGATGATGGCACTTCACTTAT
GGTTAAGAGGTTGCAGAATACTCAACACTCAGAGAAAGAGTTTACATCCGAGATGGCTACGTTGGGAAATGTAAAGCACCGTAACCTGGT
GCCTCTTTTAGGTTTCTGCATGGCGAAAAAAGAAAGGCTGTTGGTCTACAAAGATATGTCAAATGGCACCTTGCATGATAGGTTGCATTC
GGTGAGTGAAGGGGAAAAAACTCTTGAGTGGCCTATGAGAATGAAAATCGCCATTGGAGCAGCCAAAGGATTTGCATGGCTTCACCACAA
CTGCAATCCTCGTATCATCCACAGAAATATTAGTTCTAAATGCATCTTGCTGGATGTGGAATATGAACCTAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21971	LRR	768
5	56254	LRR	702
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128926	Leucine-rich repeat	647

Preceding Unigenes (1)

Unigene	Build
SGN-U247376	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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