Sol Genomics Network

Unigene SGN-U275281

Unigene Basic Information

Unigene ID:	SGN-U275281
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275281
mRNA sequence:	Length: 1525 bp

>SGN-U275281 Solanum tuberosum #4 (6 members)
CACGGGGTGAGGCAAATGAGAACGGCATGGGCAGATGGACCAGAATTCATCACTCAGTGTCCGATTAGACCAGGAGGGAGTTACACTTAT
CGGTTTACTATTCAAGGACAAGAAGGGACACTTTGGTGGCACGCCCATAGCTCGTGGCTCAGGGCCACTGTTTATGGAGCCTTAGTTATC
CACCCAAAAGAAGGAACGGCTTATCCATTCCCTAAGCCCAAGAGACAAACACCCATTCTGCTTGGTGAGTGGTGGGATGCAAACCCCATT
GATGTTATTAGACAAGCCACACGAACGGGAGCAGCACCTAATGCATCAGATGCTTACACCATCAATGGTCAACCGGGTGATCTTTACAAG
TGTTCTAATCAAGATACTACCATAGTCCATGTGGACTCAGGTGAGACGAACCTCCTTCGAGTCATCAACTCTGGACTCAACCAACAACTT
TTCTTCACAGTGGCCAACCACAAGTTCACTGTTGTTGGAGCAGATGCATCTTATGTTAAACCATTCACGACATCAGTCCTTATGCTAGGA
CCAGGCCAGACTACTGATGTCCTCATAACTGCTAATCAACAGCCAGCCAGATACTACATGGCTGCACGTGCCTACGCAAGTGCACAAGGA
GCACCCTTTGACAACACCACAACCACAGCCATCTTAGAGTACAAGGCTGCTCCTTGCCCTGCTAAGGGTGTCAAGATAAACCCCGCTTTC
CCATCTCTACCAGCATTTAATGACACAGCCACCGCCACTGCCTTCACCAGTAGCTTCAGAAGTGCAAGAAAAGTCCAAGTGCCAACTGAA
ATCGATGAAGATCTATTCTTCACAGTTGGATTGGGACTCAACAATTGCCCTGCAGGGGCAAGTTCCAGCAGCTGTCAAGGTCCAAATGGA
ACGCGGTTCACTGCCAGTATGAACAATGTATCATTTGTGCTACCATCCAATTTCTCCTTACTGCAAGCACATCACCAGGGAATACCTGGA
GTTTTCTCAACAGATTTCCCATCAAGCCCACCCGTTAAATTTGATTACACTGGTAATGTTAGCAGGTCACTCTGGCAACCTATTTCCGCG
ACTAAAGTATACAAGTTAAGTTATGGCGCGAGAGTGCAGATTGTGTTACAGGGGACTAGTATCGTCACAGCTGAAAACCATCCAATTCAT
CTTCACGGATACGATTTTTACATTCTTGCTGAGGGATTTGGAAACTTCAATCCACAAACAGATACTTCTAAATTTAACCTTGTTGATCCA
CCTCTTCGTAATACTGCAAGTGTACCAGTCAATGGATGGTCCGTCATAAGATTTGTAGCTGATAATCCAGGAATTTGGCTAATGCACTGT
CACTTGGATGTGCACATTACTTGGGGTTTGGCCATGGCATTCCTTGTGGAAAATGGAGTTACTGAATTAGAAGCAGTAAGGAGCCTCCAG
TTGACTTCCTGTTTGGTAACACTGGCTATCCACAACACTACAGAAATCATTTTGAATATTTTAGTTTATATCAATTATATTGTCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	69	Cu-oxidase CopA	171
2	22146	Cu-oxidase CopA	54
5	56362	Cu-oxidase CopA	59
1.1	101438	Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507)	162
2	118582	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	49
5	129041	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	54

Preceding Unigenes (1)

Unigene	Build
SGN-U249583	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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