Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U578818 and SGN-U593710 in the current build, Tomato 200607 #2

Unigene SGN-U313403

Unigene Basic Information

Unigene ID:	SGN-U313403
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313403
mRNA sequence:	Length: 2371 bp

>SGN-U313403 Tomato 200607 #1 (65 members)
TTAATGAAATGGAATCAGAATTTGAAATTTATAGCTAATTTGAGTTACTAATTTATAAATTAAAATATTTCTTCACTATTTAATAAAATT
TTAATTAAATATAAAAGTTACTAAATTTATCTGAACTCGTACCTAATGTTATACTTCTTCTGTTTCACTTTTATTTATCATGTTACGCTT
TTCGAAACTAATTTAACTAATTTTCAATGTTAGATTAGATTATATTAATTTGATAGTTTAAACAAAAAATTTAGATATTCAAAAACTATA
CAAATAGTACTATATATTGCAATTTTTTACATATCAATATGATGAAAAAATACATCATAAAATATTAGTTCAAAATTTGTTCGACTCTAA
AAAAGAAACCATGACAAATAAAAATAGACGAAGGGAATAGTTCTACTTATGATAGTCTATATATACGATCATATAAATACTAGTATTATT
ATTAGATATATATACACCACATAGTATTGTGTGCTAGTGAGTGTAAGATAAGGCTTTCAATATGGATATACCATACAATTTTAAGCTTGC
AATATTTTCATTTGCAATTATTTTTGTATTAAGATGGGCATGGAGAATCTTGAATTATGTGTGGTTGAAACCAAAATATTTGGAGAAACA
ACTAAGAAAACAAGGTTTCAAAGGTCATACTTATAAGTTTTTGTTTGGGGATATGAAAGAGATGAGCAAGATGGGTGAAGAAGCTTGGTC
CAAGCCTGTTAATTTCTCCCATGACACGATTTGGCCTAGAGTGAACCCATTCATACACAAAATCATCACAAACTATGGTAAGAATTGTTT
TGTGTGGTTTGGGCCAAGACCAGCAGTGGTGATCATGGATCCAGAAGTTATAAAGGAGGTGATGATGAAGAATTATGTGTTTCAGAAGCC
AGGTGGCAATCCACTCACCAAATTATTAGCAACTGGAATTGCAGACTATGAGGCAGATAAATGGGCTGTACATAGAAGGCTTCTCAATCC
TGCTTTTCACCTTGACAAGTTGAAGCATATGCTACCTGCATTTAAATTGACTGGTAATGAGATGTTGAGCAAATGGGAGAAAATTGTGTC
TAGAGAAGGATCAGAGATAGATGTGTTGCCATATCTACAAACTTTGACAAGTGATGCAATTTCAAGAACTGCTTTTGGTAGTAGCTACGA
AGAAGGAATAAAGATTTTTGAACTTCAAAAAGAACAAATTCAACTAATTTTAGAAGTGTCACGCACGATATATATTCCAGGATGGAGATT
TTTGCCAACTAAAAGGAACAAAAGAATGAAGCAAATTTTCAATGAAGTAAGAACACTGATACTAGAAATTATCAATAAAAGAATGAGGAT
GATTGAAGCTGGAGAATCACATGATGATTTATTGGGTATATTATTGTCATCCAATTTAAAAGAAATTCAACAACATGGGAATAAGAAATT
TGGTATGAGCATTGATGAGGTGATTGAAGAATGTAAATTGTTTTATTTTGCTGGCCAAGAGACTACTTCAACTTTACTTGTATGGACAAT
GATTTTACTAAGCCAACATCCTAATTGGCAAGATAGAGCTAGAGAAGAAGTTTTACAAGTGTTTGGGAGTAATGAAGTTGACTATGACAA
GTTGAATCAACTAAAAGTAGTGACTATGATCTTAAACGAGGTCTTACGATTGTATCCAGCAGGATATATGATGACTAGAATGGTAAAAAC
AAAAACAAAGTTAGGAAATTTGTGTTTACCAGGTGGTGTGCAACTTTTGTTACCAACAATATTGTTGCAACATGACACTAAAATATGGGG
AGATGATGCAATGGAATTCAATCCAGAGAGGTTTAGTGATGGAATATTAAAAGCAACAAAAGGACAACTTGTGTTTTTTCCATTTGGTTG
GGGTCCTAGAATATGCATTGGACAAAACTTTGCTATGTTAGAGGCAAAAATGGCAATGGCTATGATACTTAAACACTATGCATTTGAACT
CTCTTCATCTTATTCTCATGCTCCTCATCCATTAATGCTTCAACCTCAATTTGGTGCTCCTTTAATTTTGTACAAGTTATAGACATGGTT
ATCATGTTTTATCTTTTGAGTCATGTTATATTAATAATTAACATAAATAAATGTTGTTTTGTCAATTATGGTTCAGGTAACTAGGAGTTT
AAGATTGGCATAGTAGCTATTTTATAAGTGAGCTATATTATTTTGTAAGAGTGGAGTACTTTTAATATATAACTATATCAGTGTACTAAT
ATTAATGATTTTCTGCTAAAAAAAAAAATTGCTTATCCTTTGAATTGAATTATTTTTAATAAAAGAAGAGAAAATGATCAAAATTATCTC
TGAAAAAAAAAAAAAAAAAAAAAAAAAACTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	29
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	11

mRNA member sequences (65)

Alignment image suppressed for unigene with 65 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (8)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118455	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	121
5	128959	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U213431	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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