Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576374 in the current build, Tomato 200607 #2

Unigene SGN-U315415

Unigene Basic Information

Unigene ID:	SGN-U315415
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315415
mRNA sequence:	Length: 1218 bp

>SGN-U315415 Tomato 200607 #1 (17 members)
AACACATAAAAGTGTAGCAATTTCATATATAACTATAGTATTTGAAATGGCTTCCAATAGCTTCTTTCTTCTTCATGTTTTGGTCATGTT
TTCTCTAGCAAGCATGGCACTTTCGGATTCTCTTTCACCTTCTTTCTATAATCATGTATGTCCTGAAGCTTTGCCAGCCATAAAACGAGT
CGTTGAGGATGCAGTCAGGAAAGAGAGGCGAATGGGTGCCTCTTTGCTACGTTTACACTTTCATGATTGTTTTGTCAATGGGTGTGACGC
TTCAATTCTTCTAGACAAAACGGCTACTATTGACAGTGAAAAGACTGCGATACCCAATAACAATTCTATTAGAGGATTTGATGTGATTGA
CAAAATCAAGTCAGAAGTTGATAAATGTTGTGGACGTTCTATTGTGTCTTGTGCAGATATTGTAGCTGTTGCAGCTCGCGACTCTGTAGT
TGCACTAGGTGGACCAACATGGGAAGTTCCTTTGGGAAGAAGGGATTCGACTACAGCAAGTAGAACCAAAGCAAACAATGATATCCCACC
TCCAACTTTGGACTTACCAGCACTTATCAACAGCTTCAAGAAGCAAGGATTGAATGAGAAAGATCTCGTCGCACTCTCTGGAGGACACAC
ACTAGGATTTGCTCAATGTTCCACCTTCAGGAATCGTATCTACAATGACACTAACATCGACTCCACTTTTGCAAGCCAACGCAAAGCCAA
TTGTCCACGCAGTGGAGGCAATACCAACCTTGCTCCACTTGATCCAACTCCAGCTCTTTTTGATTCAAAATATTTTAGTAACTTGGTGTC
CAAGAAAGGACTTTTGCACTCTGATCAAGCACTATTTAATGGCGGTCAAACTGATAATCTTGTTAAGAAATATAGTACCAACCTCGGGAG
TTTCTCTAAAGATTTTGCCGAGTCTATGATTAAGATGGGAAATATTAAGCCATTGACAGGGAATCAAGGCCAAATTCGCGTAAACTGCAG
GAAGGTGAACGTCTAAGATAATGTTGATTCATGAATAATTGTTTCAAGAATTTGATTGTTTTCCAGTGTAATTGTGATTTTTACTCAAGA
GCCTCTGTTCCATAAAGCAAGTTAATTGCGAATGGAGAGACTTTGTAGAGTTGTGTGTTAATTTGTTAATTATGTAGACATTGTATCTTC
TTGTTTTGATTGCTCAATAAATTCATGTTATTTCTAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	6
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	4
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	3

mRNA member sequences (17)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101394	Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase	328
2	118419	Haem peroxidase Plant peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	263
5	128931	Haem peroxidase Plant peroxidase - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979) Haem peroxidase plant/fungal/bacterial - Molecular Function: peroxidase activity (GO:0004601) - Biological Process: response to oxidative stress (GO:0006979)	255

Preceding Unigenes (1)

Unigene	Build
SGN-U214243	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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