Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U564297 in the current build, Tomato 200607 #2

Unigene SGN-U316218

Unigene Basic Information

Unigene ID:	SGN-U316218
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316218
mRNA sequence:	Length: 2228 bp

>SGN-U316218 Tomato 200607 #1 (30 members)
GCTTATATAACAAAACAACAGTCTCTTGAACTAATGTTTCTTGATTCTAATGAACTGAAAATGAATTATTCTCATCTCATCTTTGTTTTT
ACCATCATTCTTGCTTATTCCTCTGTTTCAATTCTTGCACAACAGCCTTATTTTGGAACTGGAACAAATGACTGCAGCAGCCAAGATACC
TCCACTTCTGCTTTTGGGTATTTATGCAATGGCGTTAACCGTACTTGCCAATCTTATTTGACCTTCAGATCTCAACCCCCTTTCAATACT
GTGTCCTCAATCTCTTCTTTACTCGGTGCTAATCCTTCACAGCTCTCTCAGCTCAATTCTGTTTCTCAAAATGCTACCTTTAACACCAAT
CAAATGGTTCTTGTTCCTGTCACTTGTTCTTGTTCAGGTCAGTTTTATCAATCAAATGCATCTTATGTTATCAGAAGGGATGATAGTTTC
TTGAATATTGCAATGAATACCTTACAAGGATTGTCAACTTGCCAAGCTATCAACGCGGAGAACAGTGAACAAGCTAACAATCTTGTTGTT
GGTTCAAGAATTAATGTTCCTCTGCGATGTGCTTGTCCTACACAAAACCAAACTAATAATGGTACAAATTATCTGCTTACTTATTTGATT
GCTTCTGGGGAATTTGTTTCCTTTATTAGTGATAAATTTGGGGTGGATTTTAGGGCAACTCTTGCTGCTAATAGTATACCAGAAGATGCT
CCTACTGTCTTTCCAAATACTACTCTATTAGTTCCTTTATCGACCCCACCTTTGAGTTCCCAAGTTGCTGGACCATCTCCACCACCGCCT
CCTGCGACAACACCAACACCACCTGCTGTCCCTGTATCGGAGAGCAGCTCGAACAAAACTTGGATATATGTTGTCGCTGGTGTTGTTGGA
GGACTTGTTGCTTTGTGTATTCTGGGGGTGGTTGTTTTCTTTTTGTTTTTCAGGAAAAAGGAAAAGAAAGCTGATCCACAGTTTGTTTCT
GAAAGCTTTGAAGCTGTTGAGAAACCGTCGAATAAGAAAGTTGAAGAAGAATCAGAGGAGTTTTTGGAAAGTTTATCCAGCATAGCTCAA
TCTGTTAAGGTTTACAAGTTTGAAGAGGTTAAAGCAGCCACAGAAAATTTCAGTCCTACATGTTTGATTAAGGGATCTGTTTATCGGGGC
ACGATAAATGGGGATTTTGCTGCTATAAAGAAAATGAGTGGTGATGTATCAAAGGAAATTAATTTGTTGAGCAAAATCAATCATTTTAAT
CTTATTAGTCTATCGGGAATTTGTTTTCATGATGGTCACTGGTATCTTGTATATGAATATGCTGCCAATGGACCATTAAGTGATTGGATA
TGTCACCATAATGGTGAGCAGAAGTCACTAAGTTGGGCACAAAGAGTACAAATTTCTTTTGATGTGGCTACAGGACTTAACTATCTCCAT
AGCTACACATCCCCACCTCATGTTCACAAGGATTTAAACGGTGATAATATACTTCTTGATGGTGATTTAAGAGCCAAGATTGCTAACTTT
GGTCTAGCAAGGTCAGCAGATGGACAAGAAGGTGAGTTTGCATTGACAAGGCACATAGTTGGGACCCAAGGCTACATGGCACCTGAGTAT
TTGGAGAATGGGCTAGTCTCACCGAAGCTGGATGTCTATGCATTGGGAGTTCTGTTGCTGGAGATTCTCACCGGGAAAGAAGTTTCCGCT
TTATATGAAGGTTCAAACACAAACTTGGCTGAGTTGTTGATCCCGGTGCTTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTT
GACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGCCATGGTCAGATTGATCGATAACTGCCTAATGAAAGATCCCTCACAT
CGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAGCCACACACTCATGGGAAACGTCATTTAGCACTTCAGTGTCA
CCACATAGATTGCCCTAGATCAATGATTGTTTTTCTTTGTTGTTTATTTTGTTTTTGTTTTTTCCTCCTTCCACATCTAGCATGATTTGT
TATGTGCAATTGTTATTACCTTGTTTATGAATTTGGAAGAGCTATTGCACCATTTATCCTACATAAAAATCAGTTTAACATTTCAGTCGA
AGATTCAAGCATTAATAGAACTATTGCAAAGCAACACACCAACAACAGAAGCAACGTTCGGGGGGGGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	22
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1

mRNA member sequences (30)

Alignment image suppressed for unigene with 30 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (1)

Unigene	Build
SGN-U214930	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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