Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U572726 in the current build, Tomato 200607 #2

Unigene SGN-U316851

Unigene Basic Information

Unigene ID:	SGN-U316851
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316851
mRNA sequence:	Length: 1251 bp

>SGN-U316851 Tomato 200607 #1 (24 members)
TTCTGGAGACTTCTTTTGAGGGAGGGTTGTTCATCTCTCTACTCTATCTCTCTAGAGTTTTAAATTCTTTGAACAAAGAAAAAAAAATCT
AATCACTTTTTGTATTAAAGTTTGCTGGAGATTTGTATTTAATTTGTCGACAAGACAGGAAAAATTCTGGGGTGTTAAGTTTTTCTTGAT
CGTTTTTTGGTGGTATTGAAGTTATGGAAGACAAAAGCAATGATTATTATGCAGTTTTGGGGTTGAAGAAGGAATGCACTGACACAGAAC
TTAGGAATGCCTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTTCAGCATCGGGGAATTTGAAGTTTGTAGATGAAGCAAAGA
AGCAATTTCAGGCAATTCAAGAAGCATATTCTGTGTTATCGGATGCAAACAAAAAGTTTTTGTACGATGTAGGAGTTTATGACTCTGGTG
ATGATGACGACGAAAATGGCATGGGTGATTTCCTGAATGAAATGGCAGCTATGATGAGCCAAAATAAGTCCAATGAAAATCAGGGAGAAG
AAACCTTTGAGGAATTGCAGGATATGTTTAATGAAATGTTCAACAGTGATAATGGAACGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTGGACTGGAACTCCTTCAATGTGCTCTACTACATCATCTACATCTTCAAGTGAGACTTTTTTAACCTTTCCCAACAAGAGAAGTTCAG
GTGAAATGAAGTCGGGTAGTAGTGTAAGAGGCGATTCTTGCCAATTCCAAGGATTTTGTGTAGGGGCAGGTGGAACTTCTGGAAAATGCA
ATGAAAGAGAACGAAGTTGGAGGAAAAATTCCAAGAGTGGACGGAAGCATTAGGAGGAGAGATGCCAAAATGCAAAAGGTTCTATCATAA
TTCAACAATTATTTTACCCAAAAGATAGGGAAAATGAAAAGAGCTGCAGCTGCTTAGTCCTGGTTTGATCCAAGTTCTTTTGTGGCTGTT
GTTTGTTACTATTTAAGGGATCAAGAGTTGTTGCCAAGGTTCTTTTTCACAGAAATCAGGATCTTCTTGGTCTTGTGAACACAAATGTAC
TGTAATTCTAGCTGCCCAAGTGTGATTCAAAAGGTTTTCACCAGACATAAATTCTTAGTATTTCATATCTTGAATTCTTTAGCAATTATA
TTGTATTGCTATTGAATCAAATCATTTAAGCTCGAGCCTTACGATGAAAAAAAAAAAAAAAAATTATATTTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (24)

To view details for a particular member sequence, click the SGN-E# identifier.
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Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118427	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	212
5	130640	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U215695	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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