Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U586127 in the current build, Tomato 200607 #2

Unigene SGN-U319538

Unigene Basic Information

Unigene ID:	SGN-U319538
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319538
mRNA sequence:	Length: 1477 bp

>SGN-U319538 Tomato 200607 #1 (13 members)
GGAACAGTGCGCATTTGGGAGGTTGAAACTGGAAGGTGTGTCAGGATTTGGGAGCTTGGGGAATCTGTAAGTCATGTCTCCTGGAATCCT
TTGCCTGAACGCCCCATATTGGCAGCCTGCATGGGAGAAGATGTATATCTTCTGAATACTGGACTTGGCAACGCAGAAGAACAAAAGAGT
CTTGAAGAGCTTTTGCATGTTGAAACTCCATCAACCCCTGATGACTCTGATAATGATAAAATCGCTGTGAATTGGGTTCAAGATGATAAG
AATGGGGGAATCAGGTTGAAGCACTTCAAGACTGTTTCTTCAGTTGAGTGGCATCGGAAGGGCGACTATTTCTCAACGCTTATGCCATCT
GCCCAATCAAAAGCAGTGCTAATTCATATGCTCTCAAAGAAACAGACTCAAAGAATACCATTCAAGCTTCATGGACTTCCAGTTTCAACA
GCTTTCCATCCCTCTCGCTCTGCCTTCTTTATTTCAACAAAGAAAAATATTCGAGTTTATGATCTCTTGAAGCAAAAGCTCATTAAGAAG
CTAGAGACAGGGGTTCGCGAAGTCTCGTCTATTGCTGTTCATCCTGGTGGTGACAATCTTATTGTAGGGAGCAAAGACGGGAAACTGTGC
TGGTTTGATATGGACCTTTCATCTCAACCTTACAGAGTTCTCAATTGCCATCCGAAGGACATCAACAGAGTGGCCTTTCATCGCTCCTAT
CCTTTGTTTGCTTCATCTTCTGACGATTGTACGGCATATGTTTTCCATGGCATGGTTTATTCAGATCTAAACCAGAATCCATTGATTGTA
CCTCTGGAGATTCTTCGTGGTCATGCCAGTGAAAATGGAAGAGGTGTCATGGACTGTAAGTTCCATCCTAGGCAACCATGGTTGTTTACT
GCAGGAGCAGACTCTGTGATCAAGCTCTACTGTCACTAGGAAGATCACTCCAAAATGCATAGTTATTGATTGTCGTGTTGCATTTGTTAA
TCTGAAAAGAGGAAGACAGTACATTGCACTGTAATACTGTATACATTGATGTGGGGTAATTTGGGAAGTTGTCTTCTTGGACAAAGGGAG
GATCTCTTGTTCTTTCTCAGATAGGCGAACAATGAATTCCACATATAGATGCAGAAGTTGGCACTGTTCTTTTGTATGATCAAGATGACG
ATCACCTCGTGTGTATGGGAGTGTTTGATGCAATTCACCCTAAGCCGGCTTTTTTTTACGATAGGAGAACTCTGCCCAAGTTATTATCTT
ATGTCAGCATTTTCCGTAGAGCTAGGAGCATATGGGTGAAGTACTTAGCACACTGGAGCTCTTCATTATTTTTTTGACCATAAACTGAGT
TATCATATATTTTTGTAATATTGTTATATTTATGCATGTAACAAATGGTAAGCATCTTTGGCACTCGCTATTAGCAACATAACAGTGGAA
TTTTGAAGAAATTATTTCTGCTGGTAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	5
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (13)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101382	Armadillo-like helical - Molecular Function: binding (GO:0005488)	408
2	121659	WD-40 repeat WD40-like BOP1 N-terminal	6
5	138325		2

Preceding Unigenes (1)

Unigene	Build
SGN-U217980	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer