Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U563777 and SGN-U589354 in the current build, Tomato 200607 #2

Unigene SGN-U321282

Unigene Basic Information

Unigene ID:	SGN-U321282
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321282
mRNA sequence:	Length: 1231 bp

>SGN-U321282 Tomato 200607 #1 (7 members)
GCGGTTGAAAGGATAAATAACGTCATTGGAACGTACAATGACTTAAGGCTCAGAATATTTTCCAAGCATCCTGATTTATTTCCTGAAGAG
ATATTCAACATAGAGACTTTCAACTGGTCATTTGGAATTCTCTTCTCACGTTTGGTCAGGTTACCCTCTATGGATGGAAGAGTTGCGTTG
GTTCCTTGGGCAGATATGTTGAATCATAATTGTGAGGTGGAAACATTTCTTGACTATGATAAATCATCGCAAGGAATCGTCTTTACAACA
GACAGGGCATATCTGCCAGGTGAGCAGGTTTTTATATCATATGGAAGGAAATCTAATGGAGAACTTTTGCTTTCATATGGATTTGTTCCT
AAAGAAGGGACCAATCCAAGCGACTCAGTTGAGGTGTCATTGGCACTTAAGAAATCTGACAAATGTTACAAAGAGAAGGTGGAAGCTCTA
AAGAAGCATGGATTATCAGCATCAGAATGTTTTCCAGTACAAGTTACTGGTTGGCCACTGGAGTTGATGGCTTTTGCTTATCTAGTGGTC
AGTCCACCTAGCATGAGCAGACAGTTTGAAGAGATGGCTGCTGCTGCATCAAACAAGGCAACATCAAAGAAAGATATCAAGTATCCAGAA
ATAGAAGAAGATGCATTGCAATTTATTCTCGATAGTTGTGAATCTAGCATATCAAAGTATTCCAAATTCCTTCAGGCAAGTGGAGAAATG
GATCTCGATGTAACAAACCCAAAGCAACTAAACAGAAGAGTGTTTCTGAAACAGCTAGCAGTTGACCTGTGTACAAGTGAGCGAAGGATA
CTCTATCGTAGCCAATATATATTGAGGAGAAGATTGAGGGACATAAGGAGTGGAGAATTGAGGGCTCTGAATTTATTTGATGGACTTAAG
AACCTTTTCAAATGACTTAAAGAATGACTCTTCCTGGTTTTTGAAATTGTTTTCCAAGAAAGTTTGCCACTTTCTCAATGATCAATTTTA
CAACACAAGTTGGAGTTTCCTGAAAATTTTTGCTCTCAGTGTATAATTTGCTATTCTACCTTCCAGCTTAATTAGTTTCAAGATTATTTG
TAATCTCCAAACTTTTTTGCTTACTGTTATGACCGGTTTGATGTTGCCATGTGTCTTTCTTTTTAGCACCAATAAGTGTATCTTTTACTC
TCTTTTTTCCTGTGTGTTTGGTACATAAGAAAAAAATATTATTCTAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (3)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101447	Six-hairpin glycosidase Glycoside hydrolase family 9 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975)	149
2	121139	Rubisco methyltransferase - Cellular Component: chloroplast (GO:0009507) - Molecular Function: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity (GO:0030785) Nuclear protein SET	7
5	132615	Rubisco methyltransferase - Cellular Component: chloroplast (GO:0009507) - Molecular Function: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity (GO:0030785) Nuclear protein SET	5

Preceding Unigenes (1)

Unigene	Build
SGN-U219236	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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