Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U573183 in the current build, Tomato 200607 #2

Unigene SGN-U322472

Unigene Basic Information

Unigene ID:	SGN-U322472
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322472
mRNA sequence:	Length: 833 bp

>SGN-U322472 Tomato 200607 #1 (8 members)
ATAGAAAACACAAACAACAGGCAAGTAACTTATTCAAAAAGAAGAAATGGTATAATAAAGAAAGCTAAAGAAATTACTGTTCTTTGTGAA
GCTAAGGTTTCACTTATAATCTTTGCTAGTTCTGGAAAGATGCATGAATATTGTAGCCCTTCTACTACGATNAGTGATATGTTGGATGGT
TATCAAAAAGCTTCTGGGAGGAGACTATGGGATGCTAAGCATGAGAATTTGAGTAATGAAATTGATAGAATCAAGAAAGAGAATGACAGT
ATGCAGGTTAAGCTCAGGCACCTCAAAGGAGAAGATATCAATCAACTTACCCATAAAGAGCTTATAATTATGGAAGAAGCCTTACAAAAT
GGACTTTCTAGTATCAGTGCCAAGCAGTCTGAAATCTTGAGGATGGTCAGGAAAAATGATCAAATTCTGGAGGAGGAAAATAAGCAACTT
CAATATGCTTTGCACCAAAAGGAGATGGGAGCCATTGGTGGAAGTGGAAATATGAGAGGAATTCATGAAGAAGTGTATCATCAAAGAGAA
AGGGATTATGAGTACCAAATGCCATTTGGCCTACGAGTTCAGCCAATGCAGCCAAATCTACATGAAAGAATGTAAAATTATATTAATTCC
CACTTTAAATTAAGAACTCTAATAATTTTAATTTGGGTTTCTACTATAGCTAGAAACACTAATTAATCAATTCTAGTTATATGTAATGAG
TATTAGCTAAGACTTTGTTTCATGTTGGAATTATTACCTAATTTTATGGGCTCTTCCCATGGTTTTAATTAAGTACTGAAATGTAGTGAC
ATATTTATATGAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
TPI	TPI	transcription factor

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	6
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101412	Transcription factor MADS-box - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	242
2	118437	Transcription factor MADS-box - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	170
5	128950	Transcription factor MADS-box - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	149

Preceding Unigenes (1)

Unigene	Build
SGN-U220623	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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