Sol Genomics Network

Unigene SGN-U577677

Unigene Basic Information

Unigene ID:	SGN-U577677
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2591 bp

>SGN-U577677 Tomato 200607 #2 (202 members)
GAAATAATGCCGAGGATGATACGTCCTAAAAAAATAATAATAATACACTAATCATAGTTCACAACATATTTTTTTTTATATATATAAATA
AAATTCCCATTTTTTCTCTTCTCCAAATTCTCCTAAGTAAAATTTCTCCATTACAAATCAAACCATTTTTTGTTGGTCCAATGGCATCAT
CAATTGTACAAAATGGACATGTTAATGGAGAAGCTATGGATTTATGTAAGAAATCAATTAATGTTAATGATCCATTGAATTGGGAAATGG
CTGCTGAATCATTAAGAGGGAGTCATTTGGATGAAGTGAAAAAGATGGTGGATGAATTTAGAAAGCCAATTGTGAAACTTGGGGGTGAAA
CTTTAACAGTTGCACAAGTTGCATCCATTGCAAATGTTGATAACAAAAGTAATGGGGTCAAAGTGGAACTTTCTGAAAGTGCAAGGGCTG
GTGTGAAAGCTAGTAGTGATTGGGTAATGGATAGTATGGGGAAAGGTACAGATAGTTACGGTGTGACTACTGGATTTGGTGCAACATCTC
ATAGAAGAACTAAAAATGGTGGTGCACTTCAAAAGGAACTTATCAGGTTCTTGAATGCTGGAGTTTTTGGAAATGGAACAGAATCATCTC
ATACTTTGCCACATTCAGCAACAAGGGCAGCTATGCTTGTTAGGATCAATACTCTGCTTCAAGGCTACTCTGGCATTAGATTTGAAATTT
TGGAAGCAATTACTAAGTTGATCAACAGCAACATTACCCCGTGTTTGCCCCTTCGTGGGACGATCACTGCATCGGGTGATCTTGTCCCGT
TGTCATACATTGCTGGTTTGCTCACTGGCAGGCCTAACTCCAAGGCTGTTGGACCTAATGGTGAGAAACTTAATGCTGAGGAAGCGTTCC
GCGTGGCTGGTGTTACTAGTGGATTTTTCGAGTTGCAGCCTAAGGAAGGACTTGCACTTGTGAATGGTACTGCAGTTGGTTCTGGTATGG
CATCAATGGTACTGTTTGAGTCCAACATTCTTGCTGTCATGTCTGAAGTCTTGTCAGCGATTTTCGCTGAAGTGATGAACGGAAAGCCTG
AATTCACTGACTATTTGACACACAAGTTGAAGCATCACCCTGGCCAGATTGAGGCTGCTGCTATTATGGAACACATTTTGGATGGAAGCT
CTTATGTCAAGGCAGCTCAGAAGCTCCATGAAATGGATCCTCTTCAAAAACCAAAGCAAGATCGTTATGCTCTTCGAACATCTCCACAGT
GGCTTGGACCTCAAATTGAAGTCATCCGTGCAGCAACTAAGATGATTGAGAGAGAGATTAACTCAGTGAACGACAACCCATTGATCGATG
TTTCAAGAAACAAGGCCTTACACGGTGGAAACTTCCAAGGTACCCCTATTGGTGTGTCCATGGATAATACAAGATTGGCCCTTGCATCTA
TTGGGAAATTGATGTTTGCCCAATTTTCGGAACTTGTCAACGACTATTACAACAATGGGTTGCCATCTAATCTCACAGCAGGAAGGAATC
CAAGCTTGGATTATGGACTCAAGGGAGCTGAAATTGCAATGGCTTCTTACTGCTCAGAACTTCAATTCCTTGCAAATCCAGTGACTAACC
ATGTCCAAAGTGCTGAGCAACACAACCAAGATGTGAATTCATTGGGCTTAATCTCAGCAAGGAAAACCGCTGAGGCTGTAGACATCTTGA
AGCTAATGTCATCAACCTATCTCGTGGCGCTTTGCCAAGCTATCGACTTAAGGCATTTGGAGGAAAACTTGAGGAGTGCTGTCAAGAACA
CAGTGAGCCAAGTAGCTAAGAGAACTTTGACAATGGGTGCTAATGGTGAACTTCATCCTGCAAGATTCTGCGAGAAGGAATTGCTTCGAG
TTGTGGACAGGGAATACGTGTTTGCCTATGCTGATGATCCCTGCAGCTCCACCTACCCTTTGATGCAGAAGCTGAGACAAGTCCTTGTTG
ATCATGCAATGAAGAATGGTGAAAGTGAGAAGAATGTGAACAGCTCAATCTTCCAAAAGATTGTAGCTTTCGAGGACGAATTAAAGGCCG
TGTTGCCTAAAGAAGTTGAGAGTGCAAGAGCTGTTGTTGAAAGTGGCAACCCTGCAATTCCTAACAGGATCACAGAATGCAGATCATATC
CATTGTACAGGTTGGTGAGACAAGAACTTGGATCAGAACTTTTGACAGGTGAAAAAGTTCGATCACCCGGTGAGGAGATCGACAAGGTGT
TCACAGCAATGTGCAATGGACAGATCATTGATCCATTGTTGGAGTGTCTCAAGAGCTGGAATGGTGCTCCTCTTCCAATCTGCTAGATGC
TTGCCAGAAAAAAAGACCAGTTGTGAATGCTTGTCTAGTGCTATTTTTCAGATTCTTTTTTTGCTTTATGGTGAATTACTATCATAATAT
GTTGTGAACTTACATCTTTTTTGGTTAACTTGAGAGAGTGTTAAACTCTCTTAAATATGAATATGTCTCTTTTCAGTAAAAAACTTAAAT
GAAAAGTGACAGTGTGCTTATGTCTATTCAATTCTTCTGTTCAATCAAGTTTCTCTTGTTTTATTTAAAGC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc09g007920	Solyc09g007920

Genomic locations (0)

None

Library representation (42)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	7
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	LB	Leaf Mature leaves	3316	2
Solanum lycopersicum	LC	Leaf Mature leaves	5712	13
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	9
Solanum lycopersicum	LeTransC6	leaf 1.5-month old plants	150	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	3
Solanum lycopersicum	Sl_RootGC02	root Developing giant cell	141	1
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	1
Solanum lycopersicum	Sl_RootInf02	root and collar Three weeks old	333	1
Solanum lycopersicum	Sl_RootSSH03	root	149	2
Solanum lycopersicum	Sl_RootSSH04	root	171	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	33
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	12
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	6
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	10
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	7
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	7
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	23
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	9
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2