Sol Genomics Network

Unigene SGN-U578741

Unigene Basic Information

Unigene ID:	SGN-U578741
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2750 bp

>SGN-U578741 Tomato 200607 #2 (159 members)
GAATTGGCTCATTTCGCAGTTGTTTACAGTTTTCCTAAACGGAACTCTACCATCTCTTTTTTCCGGTTACCGTTTAGGTTTCCGACCAAT
TTTCTTCTTCTCCGGTGAACTATTCCGGTTAAAAGTTGTATGGTGGGGTGTTTGTTTGAATCTTAGGTTTGTGTTTCTGTTGGTTTTGAG
TTTTAATTCTTTGTTTTGATTTAGAAAATTTTGCTTCTTCTGAAGTCGTTGTGGGGATATTCGGGTCGTGTAAGAGTGTGTTAGAAGGTG
ATTATCTTTTGATTAAGTTCTTTTTTTGCTTCTTTTGAGGGGGTAGCCGGGGCTCTGGCCTCGGCGGGTTCTAAAGCCCCCAGCTATTAC
AACATTGGTCAACAAATCATTTCTGTATAATTAGTTTTACACATTCTTTGATTCTTTTTTTTTTGTGAAGATTTTACGAGATGCCTGCTT
TAGGTTGTTGTGTAGAATCTGCTGTTTCCCCTCCTCTTGGCTATTCCTTCCTTTCCACGCCGGAGATTTTTTCCTCCGGCGTACCTCCGT
CGACAAACGCTGTCCCTCTTACCACCCATTGGTCACCGGAGCTGTCATCTGATCTGTATCGTATTGATGGTTGGGGTGCTCCGTATTTCA
CCGTTAATTCTTCCGGTGATATATCTGTCAGGCCCCATGGTACAGATACCCTTCCTCACCAAGAAATTGATCTCCTGAAGGTCGTGAAAA
AGGCTTCCGACCCGATTAATTCTGGTGGGCTCGGGTTACAGCTTCCACTCGTTGTTCGGTTTCCTGATGTTTTGAAGAACCGATTGGAGT
CTCTTCAATCGGCTTTTGATTATGCTGTTCAATCTGAAGGATATGAGGCTCATTACCAAGGTGTTTATCCTGTAAAATGCAATCAGGACA
GGTTCGTTGTTGAAGATATTGTCAAATTCGGGACGGGTTTCCGGTTTGGTCTTGAAGCTGGGTCAAAACCTGAGCTCCTCCTGGCCATGA
GCTCTCTATGCAAGGGCAGCTCGGAGGGTCTTCTTGTATGCAACGGATTCAAGGATGCAGAATACATTTCACTTGCTTTGGTTGCAAGAA
AGCTCCAATTGAACACGGTGATTGTGCTCGAACAAGAGGAGGAGCTTGATTTGGTGATTGACATCAGCCGTAAAATGGCGGTCCAGCCTG
TAATTGGGCTCCGGGCTAAGCTTAGGACCAAACATTCCGGTCATTTTGGATCCACTTCTGGAGAGAAAGGCAAGTTTGGGCTTACAACAA
CTCAGATCCTTCGTGTGGTGAGGAAACTGAAAGAATCCGGAATGTTAGATTGTCTTCAGCTGCTGCATTTCCACATTGGATCTCAGATCC
CTTCAACGGAGTTGCTTGCTGATGGTGTTGGTGAGGCTGCTCAGGTTTATTCTGAGTTAGTCCGCCTTGGTGCTGGCATGAAATTCATTG
ATATTGGTGGTGGGCTTGGAATTGATTATGATGGTACCAAATCTTCCGATTCTGATGTTTCCGTCGGATATGGCCTTCAGGATTACGCCT
CTACAGTGGTTCAAGCTGTCCGGTTTGTTTGTGACCGGAAGAACGTGAAGCATCCGGTGATCTGTAGCGAAAGTGGCAGAGCAATTGTAT
CTCATCACTCTGTTCTGATATTTGAAGCTGTGTCTTCAACTACCACGCGTTCTCAAGAGCTGTCCTCTATGAGTCTCCACTCCTTCGTGG
AGAAACTCAATGATGACGCTCGTGGCGATTACCGGAATCTATCTGCTGCTGCTATTCGCGGAGAGTACGATACCTGTATGCTTTATGCCG
ATCAGTTGAAACAGAGGTGTGTGGATCAGTTCAAAGATGGTAATCTGGACATTGAACAGCTTGCTGCCGTAGATGCCGTCTGTGACTTTG
TGTCAAAAGCTATTGGTGCTTCTGACCCTGTTCGCACCTATCATGTGAATCTGTCCGTTTTCACTTCAATTCCTGATTTCTGGGCAATCG
ACCAACTATTCCCGATTGTTCCCATCCACAAGCTAGACGAACATCCTTCAGCTCGGGGAATTCTATCCGACTTGACATGTGACAGTGATG
GAAAGATCGATAAATTCATCGGAGGCGAGTCAAGCTTGGCTCTCCATGAATTGGGAAGTGGAAACAGCGCACCTTATTATCTGGGAATGT
TTTTAGGCGGGGCATATGAGGAAGCCCTCGGCGGACTCCATAACCTATTTGGCGGACCAAGCGTCCTGCGTGTGTCACAGAGCGACAGCC
CTCACAGCTTCGCTGTAACCTATGCAGTCCCTGGGCCTTCCTGTGCTGACGTCCTCCGAGCAATGCAACACGAGCCTGAACTCATGTTCG
AGACCCTCAAGCACCGTGCAGAGGAATTCGTGCACAAGGAAGAAGAAGTAGAAGTCTCATTGGCCAATAGCCTAAATCAGTCGTTCCACA
ACATGCCATATCTTGCACCACATTCATCCTGCTGTTTTTCTGGGTATTACTATTGCAATGATGAGAATATTGTTGGTGTTGGCGCAGAAT
GTGCAATAGGGGAGGAAGAGTTTTGGCCATACTGCGTTGCTTGAAGACTTTTTGTCTTTTCAGTTTGTTGTTTTAGTAATAAAGTTTGTC
GGATGGTATGTTAAATTAATGTAAATTTTTGGTGTAATTTACTAGTTGTGGAGAAAGTTATGGTTCAATCTTTGTGTAATTTTCTCCTTA
TCCTATGTAAACTTTTTCCTTATTAAATGAATTTACCTTAGAAATTATCT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
adc1	arginine decarboxylase 1	arginine decarboxylase

Genomic locations (0)

None

Library representation (32)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	4
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	10
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	6
Solanum lycopersicum	LeMiToLf01	leaf	30679	11
Solanum lycopersicum	Sl_LeafCherry01	epidermis	226	1
Solanum lycopersicum	Sl_RootGC02	root Developing giant cell	141	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	37
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	15
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	12
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	5
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	5
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	6
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTSB	seed	1880	2
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1