Sol Genomics Network

Unigene SGN-U578831

Unigene Basic Information

Unigene ID:	SGN-U578831
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2008 bp

>SGN-U578831 Tomato 200607 #2 (444 members)
GTTCATACCTCGCTTGAAAGGGGACTTGTGGTTTGTGTTGTTATTCTCTATACGCAGCCAGGGTTTTAGCAAAGCTCAGAAAAGTTTTAA
GACATCATGGGTAAAGAGAAGATTCATATCAGCATTGTTGTCATTGGACATGTCGACTCTGGAAAGTCGACCACTACTGGTCACTTGATC
TACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTTGAGAAAGAAGCAGCTGAGATGAACAAGAGGTCATTCAAGTATGCATGG
GTGCTTGACAAGCTTAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTTGAGACCACAAAGTACTACTGCACT
GTGATTGATGCTCCTGGACACAGAGATTTCATCAAGAACATGATTACTGGTACCTCTCAGGCTGACTGTGCTGTCCTCATCATTGACTCC
ACAACTGGTGGTTTCGAAGCTGGTATTTCCAAGGATGGACAGACCCGTGAGCACGCATTGCTTGCTTTCACCCTTGGTGTCAAGCAAATG
ATTTGCTGCTGTAACAAGATGGATGCTACCACCCCCAAGTACTCCAAGGCTAGGTACGATGAAATTGTCAAGGAAGTTTCTTCCTACCTC
AAGAAAGTAGGATACAACCCTGACAAAATCCCCTTTGTCCCCATCTCTGGTTTTGAAGGAGACAACATGATTGAGCGATCAACCAACCTT
GACTGGTACAAGGGCCCAACCCTACTTGAGGCTCTTGACCAGATTAATGAGCCCAAGAGGCCCTCAGACAAGCCCCTCCGTCTTCCACTT
CAGGATGTCTACAAGATTGGAGGTATTGGAACTGTACCTGTCGGTCGTGTTGAAACTGGTGTGATTAAGCCTGGTATGGTTGTCACTTTT
GGTCCAACTGGTCTGACCACTGAGGTTAAATCTGTGGAGATGCACCACGAGGCTCTTCAGGAGGCACTTCCTGGTGACAATGTTGGGTTC
AACGTCAAGAACGTTGCAGTTAAGGATCTTAAGAGAGGTTACGTTGCCTCCAACTCCAAAGATGACCCAGCGAAGGGTGCTGCTAGCTTC
ACTGCCCAAGTTATCATCATGAACCACCCTGGTCAGATTGGAAACGGATATGCCCCAGTGCTCGACTGCCACACCTCCCACATTGCTGTC
AAGTTTGCTGAGATCTTGACCAAGATTGACAGACGTTCTGGTAAGGAACTTGAGAAGGAGCCCAAGTTTTTGAAGAATGGTGATGCCGGT
ATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCTTTGCTGAGTACCCACCATTGGGACGTTTTGCCGTGAGGGACATGCGT
CAGACTGTTGCTGTTGGAGTTGTCAAGAACGTCGACAAGAAAGACCCTACTGGTGCTAAAGTCACCAAGGCTGCCCAAAAGAAGAAGTGA
TGTGTTTTTGATGAGATTCTGCATTGATGAACTAGTTTTGTTTAATTGCATTAGCTATTTTCAATTTTGTTTTGAACATTTTACCAGTCA
TAGATATGGCTCCAGAAGCTTTTGTCATGGTTCTCTAGCCTCTTTTGAGGATAGTGGAGTTATTGAGCAATTTGGTTTGATCCAAGTTGC
TTGATGAGCTGTGACAAAAGCATCTCTGATGCCTTTCTACTTTCTGGTTTTTATAGCGAATTCCCAGATAAGATGCTGAGACGGTTTTAA
TATGTTATGCTTTTTAAGTTATCTTTTATCCTTCATTATCCTCCCTTTATCATTTTGGTTTGAGTTGTGTTCATTGCAAGGTGTTCTTCT
CTGTGTCATTGGAGATTTGCCATTGCTGAACTGTTGCTTTGATTGTCTATGCATTTTTCAAATGAGTTTCTTATACGTTTAGATTTTGTA
TTTTTTCTATTCGAGTCTTTCCCCATAGTTGTGGGATCTCTTAAAGACAGGTGACAGTGTCATTTCATTCATGGTCCAGTGTAAATACCA
GCTATACCTAAGATGTAACTTAAGACTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (42)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	7
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	43
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	12
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	13
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	4
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	11
Solanum lycopersicum	Sl_LeafInf01	Developmental stage	125	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	21
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	13
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	31
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	24
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	34
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	8
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	10
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	7
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	20
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	9
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	11
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	36
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	7
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	11
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	14
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	13
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	22
Solanum lycopersicum	cTOS	suspension cultures	8026	5
Solanum lycopersicum	cTSB	seed	1880	2
Solanum lycopersicum	cTSC	seed	2256	5
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	4
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	11
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	3