Sol Genomics Network

Unigene SGN-U580380

Unigene Basic Information

Unigene ID:	SGN-U580380
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2186 bp

>SGN-U580380 Tomato 200607 #2 (55 members)
GGCGATTGGCGGCCAAATCGGCCGAATTGGTATAATCTTATTACCGAAGCAAAAGAAAATGAAAACGCGTACACGTTCTACATAATCATC
ATCTATAAATTATTATAATTCCAATAACTGTGTATCTCTTAAGACAAAATTCACTCAAAATTCAACTACTCAAAGCAATTTACAATCAAT
TTCTCGAATCATGACAGGCACAGGAGACGAAAATCAACCCAAATTTAAAAAATCAGAGTCTCAAATACCTTCTGTTTCTTCATCATCTTC
AGATCCACAAGCACCAGAAATGGATCCCCAAAAATGGGGTACCCATATTATGGGTCCGCCTGCAGTTCCAACTTGTCATCCAGACAATCA
GAAAGCTGCTTCATGGAGAGCTGAGGATCAAAGAGAAGAGTTTCAGCCACAGCCTTATGTTGTTTATTCCCCAATTGATAAGCCTAGCAA
TAACCCACTTGATTCCGTTGTTAATGTGTTCAATTCATGGAGTAACAGAGCTGAGAACATAGCTCGCAACATTTGGTATAATCTGAAAGC
TGGACCGTCAGTTACAGAAGCGGCATGGGGAAAACTTAATTTGACAGCTAAGGCGTTGACAGAGGGTGGATTTGAGCCTCTTTACAAGCA
GATTTTTGGAGCAGATCCTAATGAACAGCTGAAAAAGACGTTTGCTTGTTATCTTTCTACTGCGACTGGGCCTGTTGCTGGTACACTCTA
TCTGTCAACTACTAAAGTTGCTTTTTGCAGCGATCGGCCATTATCATACAAAGCTCCATCTGGTCAGGAGGCCTGGAGCTACTACAAGGT
AGCAGTACCGTTGGGAAATATTGGGACTATAAACCCAATAGTGATGAAAGAGTCTCCACCAGAGAGGTACATTCAGATTGTTACCATCGA
TGGTCATGATTTCTGGTTCATGGGGTTTGTGAATTTTGATAAAGCAAAACATCATCTACTTGAAACTTTGTCAATTTTTAGAGCACAACC
CCCTCATCTCAATCTGCAACAACCAGCAGCTACTTACTAGAAGCATTGCCTGTACTCTGTTTTAGTGTGTTTTTTTTCCTGTTTGTTCCT
GCATTAGATATGTATTTGTATTTCTTTTATTGTAACATTACTTGTATGTTTATACATATTCGGGAGTGACTATGTTCGTTTTGATGTAAA
TAAAAGTTCTTTGCGTTTTAATTTATTTGTCTTGTTTTGACTTGATATAGAAGATTTTGAGATTTGAAGGTAAAAAAAAAGTTTGGGTGC
ACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGATTCGACAATGTT
CGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGGATACTAAAATGCCAATTTTTAATTATGTAATGTATAACTGACCCTA
TGTATTTAGGGGAAGCTTGTTTGAATCCTCCTTAAAGTTTTTCTCTGGAGAAACTGTAGTAATTTTACTTTGTTGTGTTCCCTTCATCTT
TTGAATTAATGGCATTTGTTTTAATACTATTTTTTTTTTTTTTTTCAAACATAGCATATAAGATTCAGACATTGAAAATAAATAAGCGTT
ACTACATAAAAAAGGAAGCAAGGAGTATTATTAAGGGAAAAGAATTAGTGTTTTGTTCATTTTTATATTTTTAAATAATTACTTTCAATA
GAGGGAGAATTATAGTTGGAAATCAGATTCATCCCATTGAAGTACAGCAGAATCCAAATTTTGTTCTCTTTTAAGCTTATCTTTCAAGAA
CCAATCACATATTTTCCCAGCATTTAACTCTTCAATTGAACAACCTTCTTGTTCTCCTATCACTTTTAATAAATTGAGAGATGAAATCGT
CAATCGACATAGAAAACGTTCATGAGTGCTGAGGCCGGACACTTCAACAAGGCCAGCTTCTTCTAGTGTCAAAAAGGTACGCCTTTCACC
ATTATTTGCTTTCACTACTAAGCTTTGCATTTGCTTTTTTCTATAAGCAAATTTTAATGGTTCTACAACATAATTAGCATTTGCATTTTG
ATATTTGGAACTTATAAATGATGGTACTAATTGATGGTAATTTTCTCCACAAGTTTTGAGCATATTCATTGTTTGAACAAAATGGGGAAT
AAAAAGATTGTTATGTTTTATTTTTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (25)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	2
Solanum lycopersicum	LeCAD	Seedling Two-week-old seedings	428	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	6
Solanum lycopersicum	LeMiToLf01	leaf	30679	1
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	2
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	1
Solanum lycopersicum	Sl_RootSSH04	root	171	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	5
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum lycopersicum	vSlycmRNA		8362	2