Sol Genomics Network

Unigene SGN-U580527

Unigene Basic Information

Unigene ID:	SGN-U580527
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1939 bp

>SGN-U580527 Tomato 200607 #2 (240 members)
GAACAAATTGCATTCTCCATTCTTGGAAGTGGCCATTCTTGATTTCTTGAAACAAAGTGTTTTTGTTATATACAGGGGGTGGAGTTAGAG
GGTAAGTTACGCATTTAGTCGTAACTTTAGTCAAACTTCGTAATAATTAGAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTT
GTAAGTCAAGAAACAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAG
AAAGTGGGTAATTTTGTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTAAGTAAAGTTTGG
AAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTTATGGGTT
GTTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGAAT
TTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACT
CCATCTGGAGAACGGACGATGACATCGGAACAGATGGTCTATGATGTGGTTTTGAGGCAGGCAGCCTTGGTGAAGAGGCAACTGAGATCT
ACCAATGAGTTAGAAGTGAAGCCGGATATACCTATTCCGGGGAATTTGGGCTTGTTGAGTGAAGCATATGATAGGTGTGGTGAAGTATGT
GCAGAGTATGCAAAGACGTTTAACTTAGGAACTATGCTAATGACTCCCGAGAGAAGAAGGGCTATCTGGGCAATATATGTATGGTGCAGA
AGAACAGATGAACTTGTTGATGGCCCAAACGCATCATATATTACCCCGGCAGCCTTAGATAGGTGGGAAAATAGGCTAGAAGATGTTTTC
AATGGGCGGCCATTTGACATGCTCGATGGTGCTTTGTCCGATACAGTTTCTAACTTTCCAGTTGATATTCAGCCATTCAGAGATATGATT
GAAGGAATGCGTATGGACTTGAGAAAATCGAGATACAAAAACTTCGACGAACTATACCTTTATTGTTATTATGTTGCTGGTACGGTTGGG
TTGATGAGTGTTCCAATTATGGGTATCGCCCCTGAATCAAAGGCAACAACAGAGAGCGTATATAATGCTGCTTTGGCTCTGGGGATCGCA
AATCAATTAACTAACATACTCAGAGATGTTGGAGAAGATGCCAGAAGAGGAAGAGTCTACTTGCCTCAAGATGAATTAGCACAGGCAGGT
CTATCCGATGAAGATATATTTGCTGGAAGGGTGACCGATAAATGGAGAATCTTTATGAAGAAACAAATACATAGGGCAAGAAAGTTCTTT
GATGAGGCAGAGAAAGGCGTGACAGAATTGAGCTCAGCTAGTAGATTCCCTGTATGGGCATCTTTGGTCTTGTACCGCAAAATACTAGAT
GAGATTGAAGCCAATGACTACAACAACTTCACAAAGAGAGCATATGTGAGCAAATCAAAGAAGTTGATTGCATTACCTATTGCATATGCA
AAATCTCTTGTGCCTCCTACAAAAACTGCCTCTCTTCAAAGATAAAGCATGAAATGAAGATATATATATATATATATATAGCAATATACA
TTAGAAGAAAAAAAGGAAGAAGAAATGTTGTTGTATTGATATAAATGTATATCATAAATATTAGGTTGTAGTAACATTCAATATAATTAT
CTCTTGTAGTTGTTGTATCTTCACTTTATCTCAACTCCTTTGAGAGAACTTTCCGTAGTTATCTGCTTTGCACTTGGTTACTCAGAATTT
TACTGTGGGCATGATAATTGATATACCAAATTCAGTTTTGATTCTATCG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
psy1	Phytoene synthase 1	phytoene synthase

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	21
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	7
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	9
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	3
Solanum lycopersicum	Sl_FruitQTL	late maturation (breaker and red ripe)	663	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	21
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	3
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	100
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	48
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	12