Sol Genomics Network

Unigene SGN-U581016

Unigene Basic Information

Unigene ID:	SGN-U581016
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1670 bp

>SGN-U581016 Tomato 200607 #2 (540 members)
GTTATAATGCAAATACATTTTACGCGATGCCTATGCAACATCAGAGTTATATGAATCAAGACTATGGCGCGACAATGTACAATCATGGTT
ATGCTCATACGGGCTACGTAGTCGAGTATGGCCACCAGCCTCAGTATGTGCCACCACCTCCTCCACCAACATACCTGAACGCGCCTCAAA
TGTTTAGTGATGAAAATCCTAATGGTTGTTTTATTATGTGAAAATGATCAACTTTCGTCCACCTTTTTGGAAGACTCAAACTCTAATTAG
GAGTCTTGTCTATGAAATAGAGCGACCTCATTTTTATTTGATTGGTTCAGCTAAATTGTACAAAAATTTAATATGTAAAAGCTGAAAAAT
AGATCCATCTTAGTTTGTACCAAAAACATTACTTCTCATCAAACATCATGGCTACCTCACAAATAGCTATTATTGTGCTTCTAGGATTAC
TTGTCGCCACCAACATTCACATAACAGAGGCTCAAATAGGTGTTTGTTATGGAATGATGGGGAACAACTTGCCATCACATTCTGAAGTTA
TACAGCTCTACAAGTCGAGAAACATTAGAAGACTGAGGCTTTATGATCCAAATCATGGAGCTTTGAATGCGCTAAGAGGATCAAACATTG
AAGTGATATTAGGACTTCCAAATGTAGATGTGAAACACATTTCTTCTGGGATGGAACACGCGAGATGGTGGGTACAGAAGAACGTTAGAG
ATTTCTGGCCTCATGTTAAAATTAAGTATATAGCTGTTGGTAATGAAATCAGCCCTGTTACTGGCACTTCCAATCTTGCCCCATTTCAAG
TTCCTGCTTTGGTTAACATTTACAAAGCAATCGGTGAAGCTGGTTTGGGAAATGACATTAAGGTCTCAACGTCTGTAGACATGACGTTGA
TTGGCAATTCTTATCCACCATCACAGGGTTCATTTAGGAACGATGTTAGATGGTTTACTGATCCAATTGTTGGGTTTTTGAGGGATACAC
GTGCACCTTTGCTCGTTAACATTTATCCTTATTTTAGCTATTCTGGTAATCCAGGACAGATTTCACTTCCGTATGCTCTTTTTACAGCAC
CTAATGTAGTGGTACAAGATGGATCGCGTCAATATAGGAACTTATTTGATGCTATGTTGGATTCTGTTTATGCTGCGATGGATCGAACAG
GAGGAGGATCTGTAGGAATAGTTGTGTCAGAGAGTGGATGGCCATCTGCTGGTGCATTTGGTGCAACACATGAAAATGCACAAACATACT
TGAGGAACTTAATTCAACATGCTAAAGAAGGTAGTCCGAGAAAGCCTGGACCTATAGAGACTTATATATTCGCCATGTTTGATGAGAATA
ACAAGAATCCAGAGCTTGAGAAGCATTTTGGAATGTTTTCACCAAACAAGCAGCCAAAATACAACCTAAACTTTGGGGTGTCTGAAAGAG
TTTGGGACATTACTAATAGCACTGCTTCTTCACTCACTAGTGAGATTTAAAAAGACATATTTGAAAGCATATATATAGTATCTTCATGCA
ATTTTATGTTTGTATGCAACACCAAATAAATTCGTAGGGGGAACTTTTAAAATTCCTTTTGTTTGTCATTCTGGAATGAAACTTTTTGTA
AGGTTGTATATTTCAATACACCATCAATTACATTATTTCCATGTTTGATT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
TOMB13GLUB	beta-1,3-glucanase TOMB13GLUB	beta-1,3-glucanase

Genomic locations (0)

None

Library representation (24)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	1
Solanum lycopersicum	Sl_LeafInf01	Developmental stage	125	1
Solanum lycopersicum	Sl_RootSSH01	root	123	1
Solanum lycopersicum	Sl_RootSSH03	root	149	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	458
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	12
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	6
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	10
Solanum lycopersicum	cTOS	suspension cultures	8026	6
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	3
Solanum lycopersicum	vSlycmRNA		8362	3