Sol Genomics Network

Unigene SGN-U581281

Unigene Basic Information

Unigene ID:	SGN-U581281
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1408 bp

>SGN-U581281 Tomato 200607 #2 (298 members)
TACTAAATACTTGACTAACATTAAAAGAAATTTTCAAGCTGATCACCTAATCCTAAAAAATTACTTACAAGTCATCATAGGCTACATTTT
CTAGTATTAATTTATGTTGAAAAGAAGTGTGGTTGTAAAAAAACCTTATACTCCAAAGTAAAGCCCCACTAGAATATGACATGGAGATTT
CAAGTAGAAACTAGAACAAACAACAATATTTTGAATGTCTAGTTGGCACCAATGAAAGCCTCAAAAACCTTATCCCACATCATAAATCTA
ATCTTTCCCCACATCCAAAAACTAAGCCAATTTCCCTTCACACATCACAAAATTATCTAAAACATATTGACCCTCCAACATCACCATTGT
AACAAAGAATTGGAAAATCCATTCCCAAAACCAAACCAAAGAGAGTAATTGAGCAATGGCTGCTTCCACACAATGTTTCTTGCACCAATA
TCATGCACTAAGATCTAGCCCTGCTAGAACATCCTCTGTTTCATCTCCTAAGCCTAACCAATTGATTTGCCGTGCACAAAAGCAAGATGA
TGCCAGCAACGCCGCCGTCTCGAGACGATTGGCTCTTACTCTCCTCATTGGTACTGCTGCCATTGGTTCCAAGGTTTCCCCTGCAGATGC
TGCCTATGGAGAAGCTGCAAATGTTTTTGGTAAGCCAAAGGAAAACACTGATTTCTTGCCATACAATGGAGATGGATTCAAGCTCCAAGT
CCCAGCCAAATGGAACCCCAGCAAAGAAGTTGAGTACCCTGGTCAGGTTCTCAGATATGAAGACAACTTTGATTCCACAAGTAATCTTAT
TGTTGCAGTTACTCCAACTGACAAGAAGTCCATCACCGACTACGGCTCCCCTGAAGAGTTCCTCTCTAAAGTGGACTATCTGCTAGGAAA
GCAAGCTTACTTTGGTAAAACTGATTCAGAGGGAGGATTTGAATCTGGTGCAGTGGCAACTGCTAACCTGTTGGAGGCATCAAGCGCAAC
AGTGGGAGGAAAAGAGTACTACTACTTGTCAGTATTGACAAGAACTGCAGATGGAGATGAAGGTGGAAAGCACCAGTTGATCACAGCCAC
AGTGAATGATGGCAAACTTTACATTTGCAAGGCACAAGCTGGTGACAAGAGATGGTTTAAGGGTGCTAAAAAGTTTGTGGAGAATGCTGC
CACTTCTTTCAGTATTGCTTAAGAATGGGAAAACTAAAGAAAACCATTATTTAAGTTTGTATGTACTTAGTTCTTCCCCCCTCTACAAAA
CATATGGTGCTGAGATGAGTTGCTTAATTGGACTTCTTTTTTGCTCTTTCCAACCAATCCCAAAAATGTTTTTAGACATGTTTCAAGTAC
TGTTGGAGGAAGCTTAATGTTAATAATTTCATAATCTGTTGATGGACTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
psbx	psbXphotosystem II 23 kDa protein

Genomic locations (0)

None

Library representation (34)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	5
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	21
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	8
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	20
Solanum lycopersicum	LB	Leaf Mature leaves	3316	7
Solanum lycopersicum	LC	Leaf Mature leaves	5712	9
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	15
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	9
Solanum lycopersicum	Sl_FruitQTL	late maturation (breaker and red ripe)	663	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	12
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	22
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	20
Solanum lycopersicum	cLES	leaf 4 weeks	5243	10
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	57
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	12
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	5
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	21
Solanum lycopersicum	cTSB	seed	1880	3
Solanum lycopersicum	cTSD	seed	1504	1
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	6
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1