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Unigene SGN-U638870

Unigene Basic Information

Unigene ID:	SGN-U638870
Unigene Build:	Coffee species #1
Date:	2010-04-19
Organism:	C.canephora C.arabica
Alternative ID:	none
mRNA sequence:	Length: 114 bp

>SGN-U638870 Coffee species #1 (1 members)
GGCTTAGTAACTTTGTGTAGATCACAGTGGTGGTTGAGCCCTTTCTTCTTTTGGCTCCCTTGATTCCCTCTGGGATCTATATATGTGTTT
TTATCTTTGGATGCTTTAACAGTG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs46w	Endosperm and perisperm 46 week after pollination	10903	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E663937
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P805636 (39 Aa)

XTVKASKDKNTYIDPRGNQGSQKKKGLNHHCDLHKVTKP

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P822734 (38 Aa)

TVKASKDKNTYIDPRGNQGSQKKKGLNHHCDLHKVTKP

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (0)

None

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