Sol Genomics Network

Unigene SGN-U196122

Unigene Basic Information

Unigene ID:	SGN-U196122
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	196122
mRNA sequence:	Length: 1562 bp

>SGN-U196122 Capsicum annuum #1 (28 members)
GAAACACAAAAAGTTTTCATATATATTGAATTCTTATTTTCTCTGTTTCCCTTTGAGTCCTCCGAATGGCCGGCCAAACAGTTATTGTTT
CCGGGTTAAACCCGGCGGCCATTCTTCAGTCAACAATCGGCGGAGCTCCTCCTTCTACCGCCGCAGCTGCGGCGGAGAACGGTGACACCA
CCAGAAAAGTTGTTCCTCTATCAAAAGATGCCCTTCAGGATTTCATGGTTTCCATCATAACCCAGAAGTTACAAGGTGAAAAGAAGCCGT
TTTATGTGTTAGATTTGGGGGAAGTTGTTTCCCTGATGGATCAATGGAACGTTGCGTTGCCGAATGTTCGTCCGTTTTATGCTGTGAAGT
GTAATCCTGAACCTTCATTCCTTTCTATGTTGGCTGCTATGGGTTCGAATTTTGATTGTGCTAGCCGTGCTGAAATTGAGTACGTTTTGT
CTCTTGGTATCTCGCCGGAGAGGATTGTATTCGCTAACCCATGTAAGCCGGAATCCGATATCATTTTCGCCGAAAAAGTTGGAGTCAATC
TCACAACTTACGATTCAGAGGACGAGGTTTACAAGATCAAAAAGCATCACCCAAAATGCGAGCTTTTGCTCCGTATCAAACCGATGAACG
ATGGTAATGCTAGATGTCCAATGGGTCCAAAATACGGCGCTTTGCCTGAAGAAATCGAGCCGCTTCTCCGTATAGCTCAAGCTTCCCGGC
TCACTGTCTCCGGCGTCTCCTTCCATATCGGCAGCGGCGACGCTGATTCCAACGCTTATTTAGGCGCCATAGCCGCAGCCAAGCAAGTTT
TCGAAACGGCAGCCAAATTCGGCATGTCGAAAATGAATGTTCTAGACATCGGCGGCGGGTTTACCTCCGGCCACCAGTTCACCACCGCAG
CAACCGCCGTGAAATCAGCTTTACAACAACACTTCTCTAACGAACCGGAGCTCACCATCATAGCTGAACCGGGTCGGTTTTTCGCAGAAA
CGGCGTTCACATTGGCAACAACCATCATCGGAAAAAGAGTACGTGGAGATTTACGTGAATACTGGATCAACGACGGGTTATACGGGTCAA
TGAACTGTGTACTTTACGATCATGCAACGGTAACGGCGACGCCGTTGGCATGCATGTCGAATCGGGTCAACCTAAACTGCAGCGGGTCGA
AAATGTTTCCGTCGACTATATTCGGGCCCACGTGTGATGCACTTGATACCGTGTTAAGGGATTACCAGTTACCGGAACTGCAGGTTAATG
ACTGGTTAATTTTTCCTAATATGGGTGCTTATACTAAAGCTGCTGGATCAAATTTTAATGGATTTAATACTTCTGCCATTGTTACTCACC
TTGCTTATGCTTATCCAAGTTGATAGGATTTAATTAGCAAGGGGTTGTAATTTTATTTTTCTTATGGGTTTCCAATTTTGTTGTTTTGTT
AATTTATTTTTCAATCAGCTTGTAGTAGTTTTATCGTTGTCCCATAAAAAAAAAACAAGGATTTGCCCTTAATAAGATTTTGTTTATTTT
AAAAAAAAAAAAAAAAAAAAACTCGAGACTAG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
odc1	ornithine decarboxylase 1	ornithine decarboxylase

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	1
Capsicum annuum	KS07	Flower bud	4235	3
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	12
Capsicum annuum	KS10	Hairy root	2179	5
Capsicum annuum	KS11	Early root	2168	3
Capsicum annuum	KS12	Placenta	4279	4

mRNA member sequences (28)

Alignment image suppressed for unigene with 28 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	514	Decarbxylse2 DAP_decrbxlase	34
2	23737		11
5	57809		11
1.1	101407	Orn/DAP/Arg decarboxylase 2 - Molecular Function: catalytic activity (GO:0003824)	255
2	120256		10
5	130536		10

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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