Sol Genomics Network

Unigene SGN-U197350

Unigene Basic Information

Unigene ID:	SGN-U197350
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	197350
mRNA sequence:	Length: 796 bp

>SGN-U197350 Capsicum annuum #1 (3 members)
GATTTTCTCACTCTCTCTGTTCTGCTCTGAAAATCTTGGAAAAAATGGGGTCTACTAGTTGTGTTCTCTTGGGTATTTTCTCTCTTGTTA
TGGTGGGCTTGGTTAGTTCTTCAAAATTTGAAGAGCTATATCAGCCTAGCTGGGCTTTTGACCATTTGACAACTGAAGGAGAAATTCTTA
GGATGAAACTTGACAGCCTTTCTGGTACTGGATTTCAGTCAAAGGGCAAGTACATGTTTGGTAAAGTTACTGTTCAGATTAAGCTTGTTG
AGGGTGACTCTGCTGGAACTGTAACTGCTTTCTATATGTCGTCAGATGGACCAACCCATAATGAGTTTGATTTTGAGTTTCTTGGTAACA
CAACTGGTGAACCATACACTGTTCAAACCAATGTATATGTCAATGGTGTTGGTAACAGGGAACAAAGATTGAACCTTTGGTTCGACCCAT
CTAAGGATTTCCACTCTTATTCCATCTTGTGGAACCAACGCCAAGTTGTATTCTTGGTAGATGAGACACCAGTTCGTGTACACTCCAATT
TGGAGCACAAAGGGATACCATTCCCCAAGGACCAACCAATGGGTGTATACAGTTCAATATGGAATGCAGATGATTGGGCTACACAAGGCG
GAAGGGTAAAGACTGATTGGTCGCACGCGCCCTTCGTTGCATCCTACAAGGGATTTGAGATTAACCGGTTGTGAGTGCCCCGCAACTGCT
GCAGTCGCCTGAGAATACTCAGCGTTGCAGCAGCAATGGTCAGAAGAGGTACTGGTGGGATGAACCGGCTTATGTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY512584	sadtomato protein

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS07	Flower bud	4235	1
Capsicum annuum	KS09	Young fruit (0.5-2 cm)	4055	2

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	95	Glyco_hydro_16	133
2	22025	Glyco_hydro_16	130
5	56288	Glyco_hydro_16	128
1.1	101462	Xyloglucan endo-transglycosylase C-terminal - Cellular Component: cell wall (GO:0005618) - Biological Process: glucan metabolism (GO:0006073) - Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762) - Cellular Component: apoplast (GO:0048046) Concanavalin A-like lectin/glucanase subgroup Glycoside hydrolase family 16 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975) Concanavalin A-like lectin/glucanase	129
2	118454	Glycoside hydrolase family 16 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975) Xyloglucan endo-transglycosylase C-terminal - Cellular Component: cell wall (GO:0005618) - Biological Process: glucan metabolism (GO:0006073) - Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762) - Cellular Component: apoplast (GO:0048046) Concanavalin A-like lectin/glucanase subgroup Concanavalin A-like lectin/glucanase	122
5	128954	Glycoside hydrolase family 16 - Molecular Function: hydrolase activity hydrolyzing O-glycosyl compounds (GO:0004553) - Biological Process: carbohydrate metabolism (GO:0005975) Xyloglucan endo-transglycosylase C-terminal - Cellular Component: cell wall (GO:0005618) - Biological Process: glucan metabolism (GO:0006073) - Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762) - Cellular Component: apoplast (GO:0048046) Concanavalin A-like lectin/glucanase subgroup Concanavalin A-like lectin/glucanase	122

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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