Sol Genomics Network

Unigene SGN-U199338

Unigene Basic Information

Unigene ID:	SGN-U199338
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	199338
mRNA sequence:	Length: 656 bp

>SGN-U199338 Capsicum annuum #1 (1 members)
GGAATTGCTCCTTTCCGATCATTCTTGTGGAAAATGTTCTTTGAGAAACACGACGATTACAAGTTCAATGGTTTGGCATGGCTTTTCTTG
GGTGTTCCCACCAGCAGCTCCCTACTTTACAAGGAGGAATTCTAGAAAATGAAGGAGAAGGCCCCATAAAACTTCAGATTGGACTTTGCT
GTGAGCAGAGAGCAATACAAACGAAAAGGGTGAAAAGATGTACATCCAAACCATAATGGCTCAATATGCTGAAGAACTATGGACTTTGCT
CAAGAAAGACAACACATTTGTGTACATGTGTGGACTCAAGGGCATGGAGCAAGGAATTGATGACATTATGTCTTCACTTGCTGCCAAAGA
GGGTATTGACTGGGCAGACTACAACAAGCAATTGAACAATGCAGAGCAATGGAATGTGGAAGTCTACTAAATATCTTTACTTTTGCTTGT
ACAAATATGAGCCAACTTTATGCTTCTCTTCCCTGCATCCATGTAGATAGGTAAAAATTTTCCTTTAATATTGTATTTTCATTCTTTGGG
ACTTGCCTTTTTTAATCTTCCATCTGTATCTCTTAATGAATCACTGTATTGGCCTTGCCCTTCTCAAACCATGATTTTGAGGGCCTGGAT
CAATAACATATAGCTGAATCAACCTC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
fnr	ferredoxin-NADP+ oxidoreductase precursor	oxyreductase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E491056
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	297	FPN_cyt_redctse Oxred_FAD/NAD(P)	53
2	22665	FPN_cyt_redctse Oxred_FAD/NAD(P)	22
5	57578	FPN_cyt_redctse Oxred_FAD/NAD(P)	12
1.1	101624	Oxidoreductase FAD/NAD(P)-binding - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) Flavoprotein pyridine nucleotide cytochrome reductase - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	56
2	118990	Ferredoxin--NADP reductase - Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324) - Biological Process: electron transport (GO:0006118) - Cellular Component: thylakoid membrane (GO:0042651) - Molecular Function: FAD binding (GO:0050660) - Molecular Function: NADP binding (GO:0050661) Oxidoreductase FAD/NAD(P)-binding - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) Flavoprotein pyridine nucleotide cytochrome reductase - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	23
5	129986	Ferredoxin--NADP reductase - Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324) - Biological Process: electron transport (GO:0006118) - Cellular Component: thylakoid membrane (GO:0042651) - Molecular Function: FAD binding (GO:0050660) - Molecular Function: NADP binding (GO:0050661) Oxidoreductase FAD/NAD(P)-binding - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) Flavoprotein pyridine nucleotide cytochrome reductase - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	13

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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