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Unigene Basic Information |
Unigene ID: | SGN-U204047 |
Unigene Build: | Capsicum annuum #1 |
Date: | 2003-12-15 |
Organism: | C.annuum |
Alternative ID: | 204047 |
mRNA sequence: | Length: 279 bp |
>SGN-U204047 Capsicum annuum #1 (1 members)
CAGACATGTATCAGTTAAAGAAGCTGTTCTTCCATTTGAGAAATTCCAAGGCTGTGATGTGCTTCTTGGTCCTGAGATGCGCAGCACTGG
TGAGGTAATGGGTATCCACTACGAGTCATCAATTGCATTTGCCAAAGCACAAATTGCTGCTGGACAGAAAATGCCACTTTCAGGTACTCT
CTTCCTTAGCCTAAATGAAATGAAAAAACCCCATCTTACTACAATTGCTCGAGCCTTCTCGGGGCTTGGGTTTCAAATCATTGCAACTTC
TGGAACTGC
[Blast] [AA Translation]
Associated Loci (0) | None |
Genomic locations (0) | None |
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Organism | Library | Description | Library size (#ESTs) | Ests in this Unigene |
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Capsicum annuum | KS10 | Hairy root | 2179 | 1 |
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Unigene Mapped Marker Information
No member sequence or clone is mapped.
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COSII Markers Information
None cosii markers associated to this unigene.
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No expression data was found associated to this unigene
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Manual annotations
None manual annotation was found for this unigene
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Blast Annotations [Show All]
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GO Terms Annotations
No Gene Ontology annotation
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Prediction based on ESTScan [ Show ESTScan Detail]
>SGN-P38462 (93 Aa)
>SGN-P38462 (93 Aa)
RHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIHYESSIAFAKAQIAAGQKMPLSGTLFLSLNEMKKPHLTTIARAFSGLGFQIIATS
GTA
GTA
SignalP predicts non-secretion with a score of 0.05
No InterPro domain matches or not analyzed.
Prediction based on longest six frame method
>SGN-P158162 (93 Aa)
RHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIHYESSIAFAKAQIAAGQKMPLSGTLFLSLNEMKKPHLTTIARAFSGLGFQIIATS
GTA
GTA
SignalP predicts non-secretion with a score of 0.05
No InterPro domain matches or not analyzed.
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Family Build (I value*) | Family ID | Annotation** | # Members |
---|---|---|---|
1.2 | 2411 | CPase_L_N PurK_ATP CarA_L_glu CPase_L_D3 MGS_like CoA_lig_beta CPase_L_D2 D_ala_D_ala Fe-ADH Dala_lig_Van AccC PurT CPase_L | 7 |
2 | 24781 | CPase_L_N PurK_ATP CarA_L_glu CPase_L_D3 MGS_like CoA_lig_beta CPase_L_D2 D_ala_D_ala Fe-ADH Dala_lig_Van AccC PurT CPase_L | 7 |
5 | 58810 | CPase_L_N PurK_ATP CarA_L_glu CPase_L_D3 MGS_like CoA_lig_beta CPase_L_D2 D_ala_D_ala Fe-ADH Dala_lig_Van AccC PurT CPase_L | 7 |
1.1 | 101898 | Carbamoyl-phosphate synthetase large chain N-terminal - Biological Process: metabolism (GO:0008152) - Molecular Function: ligase activity (GO:0016874) ATP-grasp fold - Molecular Function: catalytic activity (GO:0003824) Carbamoyl-phosphate synthase L chain ATP-binding - Molecular Function: ATP binding (GO:0005524) | 29 |
2 | 122103 | Carbamoyl-phosphate synthetase large chain N-terminal - Biological Process: metabolism (GO:0008152) - Molecular Function: ligase activity (GO:0016874) MGS-like Carbamoyl-phosphate synthase large subunit glutamine-dependent - Molecular Function: carbamoyl-phosphate synthase activity (GO:0004086) - Biological Process: nitrogen compound metabolism (GO:0006807) Carbamoyl-phosphate synthetase large chain oligomerisation - Molecular Function: carbamoyl-phosphate synthase activity (GO:0004086) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: arginine biosynthesis (GO:0006526) - Biological Process: pyrimidine base biosynthesis (GO:0019856) Carbamoyl-phosphate synthase L chain ATP-binding - Molecular Function: ATP binding (GO:0005524) ATP-grasp fold - Molecular Function: catalytic activity (GO:0003824) Carbamoyl-phosphate synthetase large chain - Molecular Function: carbamoyl-phosphate synthase activity (GO:0004086) | 5 |
5 | 133243 | Carbamoyl-phosphate synthetase large chain N-terminal - Biological Process: metabolism (GO:0008152) - Molecular Function: ligase activity (GO:0016874) MGS-like Carbamoyl-phosphate synthase large subunit glutamine-dependent - Molecular Function: carbamoyl-phosphate synthase activity (GO:0004086) - Biological Process: nitrogen compound metabolism (GO:0006807) Carbamoyl-phosphate synthetase large chain oligomerisation - Molecular Function: carbamoyl-phosphate synthase activity (GO:0004086) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: arginine biosynthesis (GO:0006526) - Biological Process: pyrimidine base biosynthesis (GO:0019856) Carbamoyl-phosphate synthase L chain ATP-binding - Molecular Function: ATP binding (GO:0005524) ATP-grasp fold - Molecular Function: catalytic activity (GO:0003824) Carbamoyl-phosphate synthetase large chain - Molecular Function: carbamoyl-phosphate synthase activity (GO:0004086) | 4 |
*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.
Preceding Unigenes (0) | None |
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