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Unigene SGN-U205095

Unigene Basic Information

Unigene ID:	SGN-U205095
Unigene Build:	Capsicum annuum #1
Date:	2003-12-15
Organism:	C.annuum
Alternative ID:	205095
mRNA sequence:	Length: 257 bp

>SGN-U205095 Capsicum annuum #1 (1 members)
GATTAACATGATGACTAAAGTGAAGACCACTGTGATCAATTTGCCAACCCCTACTTATACTATGGGGTAAATTAAAATCACTATTATATT
TTGCTTTAGAAATAAGACAAATAATTGAGTGGTACTTTAATTTTAACAAGTTATGTTGTAGATGTTAGTAAACTTGAAAAAACAAATTAT
TGTTTGTTTCTCCCTTTTGAGCTTATGAAGATTAATATTAGAGATAAACATTTGCTTTTTTGGATTTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Capsicum annuum	KS01	leave	6599	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E491042
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P159232 (51 Aa)

HLQHNLLKLKYHSIICLISKAKYNSDFNLPHSISRGWQIDHSGLHFSHHVN

SignalP predicts non-secretion with a score of 0.171

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P39480 (22 Aa)

INMMTKVKTTVINLPTPTYTMG

SignalP predicts non-secretion with a score of 0.157

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	105	D1pyr5carbox3 Aldehyde_dehydr D1pyr5carbox2	125
2	22035	D1pyr5carbox3 Aldehyde_dehydr D1pyr5carbox2	111
5	58142	D1pyr5carbox3 Gglut_pp_reduct Aldehyde_dehydr D1pyr5carbox1 D1pyr5carbox2	9
1.1	101476	Aldehyde dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	111
2	118481	Aldehyde dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	93
5	130449	NAD-dependent aldehyde dehydrogenase - Molecular Function: oxidoreductase activity (GO:0016491) Aldehyde dehydrogenase - Biological Process: metabolism (GO:0008152) - Molecular Function: oxidoreductase activity (GO:0016491)	10

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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