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Unigene SGN-U206731

Unigene Basic Information

Unigene ID:	SGN-U206731
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	206731
mRNA sequence:	Length: 268 bp

>SGN-U206731 Solanum melongena #2 (1 members)
GCCGCCATGGGATATCCCATGTTATTTGCCATGGCCATTCCCGTTTCCACGTCCATATCCATGCCCTCCTCCACGACCACGACCACGACC
ACCTCCACGACCACGACCACGACCACCTGCACGACCACGACCAACACCATGCTCCCCACCACCTACGCCTCCTCGCTCCCCACCACCTCC
GCCTGTGCGCTCCCCACCACCGAGCCCGGCCCCTCCCGCTCCAGCGACGACTTGCTCAGCTAGTGACAAAGAAAAGGTGAAGAAATGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E518622
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30290 (89 Aa)

AAMGYPMLFAMAIPVSTPYPCPPPRPRPRPPPRPRPRPPARPRPTPCSPPPTPPRSPPPPPVRSPPPSPAPPAPATTCSASDKEKVKKC

SignalP predicts non-secretion with a score of 0.383

IPR000694 Proline-rich region

Prediction based on longest six frame method

>SGN-P209166 (89 Aa)

PPWDIPCYLPWPFPFPRPYPCPPPRPRPRPPPRPRPRPPARPRPTPCSPPPTPPRSPPPPPVRSPPPSPAPPAPATTCSASDKEKVKKC

SignalP predicts non-secretion with a score of 0.157

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1	Prot_kinase	3744
2	21978	Extensin_2	350
5	56265	Extensin_2	209
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118412	Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor	351
5	128948	Leucine-rich repeat Leucine-rich repeat plant specific	155

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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