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Unigene SGN-U206777

Unigene Basic Information

Unigene ID:	SGN-U206777
Unigene Build:	Solanum melongena #2
Date:	2004-01-12
Organism:	S.melongena
Alternative ID:	206777
mRNA sequence:	Length: 261 bp

>SGN-U206777 Solanum melongena #2 (1 members)
CTCTGATCGAGTCACTGCGCTCGAGAGGATCTTACGGGACAAGGAGAAGAAGAACAAAATTGGTGAGCGAAAGTACACGTGGACTGCCGA
GATCAAGAGCCCTGAGAAGGACGGCGTGGATCGGAAATACAAGTGGGTTGCTGAGGTTAAAGATGGTAAGAAGAAAGGTGCTTTGGATAA
AACCTGCAAATTTAGTGCTGAGATCAAGGGAAAGGGTGAGGAATCACGTAGTTACAGTTTCAAAGCATCAAATGTCAGCGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum melongena	cSML	buds & flowers anthesis-stage flowers, 4-8 week old plants	4031	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E517773
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (3)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P30332 (87 Aa)

SDRVTALERILRDKEKKNKIGERKYTWTAEIKSPEKDGVDRKYKWVAEVKDGKKKGALDKTCKFSAEIKGKGEESRSYSFKASNVSX

SignalP predicts non-secretion with a score of 0.024

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P209214 (86 Aa)

SDRVTALERILRDKEKKNKIGERKYTWTAEIKSPEKDGVDRKYKWVAEVKDGKKKGALDKTCKFSAEIKGKGEESRSYSFKASNVS

SignalP predicts non-secretion with a score of 0.024

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P209215 (86 Aa)

LIESLRSRGSYGTRRRRTKLVSESTRGLPRSRALRRTAWIGNTSGLLRLKMVRRKVLWIKPANLVLRSRERVRNHVVTVSKHQMSA

SignalP predicts non-secretion with a score of 0.066

No InterPro domain matches or not analyzed.

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	806	IQ_region	23
2	23848	Pept_M4_propep IQ_region BAG	10
5	57917	Pept_M4_propep IQ_region BAG	10
1.1	101363	Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor	1182
2	120510	IQ calmodulin-binding region	9
5	130793	IQ calmodulin-binding region	9

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

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